RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 CDK5RAP3Q96JB5 506 aa21.8■■□□□ 1.08
LIMS2-207ENST00000409808 PNMA5Q96PV4 448 aa21.8■■□□□ 1.08
LIMS2-207ENST00000409808 NAP1L4Q99733 375 aaKnown RBP21.8■■□□□ 1.08
LIMS2-207ENST00000409808 BLOC1S4Q9NUP1 217 aa21.8■■□□□ 1.08
LIMS2-207ENST00000409808 SNX12Q9UMY4 172 aa21.8■■□□□ 1.08
LIMS2-207ENST00000409808 STAT3P40763 770 aa21.79■■□□□ 1.08
LIMS2-207ENST00000409808 CCNI2Q6ZMN8 369 aaPredicted RBP21.79■■□□□ 1.08
LIMS2-207ENST00000409808 LARP4BQ92615 738 aaKnown RBP21.79■■□□□ 1.08
LIMS2-207ENST00000409808 JADE2Q9NQC1 790 aa21.79■■□□□ 1.08
LIMS2-207ENST00000409808 PCDHA13Q9Y5I0 950 aa21.79■■□□□ 1.08
LIMS2-207ENST00000409808 OTOFQ9HC10 1997 aa21.79■■□□□ 1.08
LIMS2-207ENST00000409808 RLFQ13129 1914 aa21.79■■□□□ 1.08
LIMS2-207ENST00000409808 COL11A1P12107 1806 aaPredicted RBP21.79■■□□□ 1.08
LIMS2-207ENST00000409808 ZNF76P36508 570 aa21.79■■□□□ 1.08
LIMS2-207ENST00000409808 ECM1Q16610 540 aa21.79■■□□□ 1.08
LIMS2-207ENST00000409808 ETNPPLQ8TBG4 499 aa21.79■■□□□ 1.08
LIMS2-207ENST00000409808 SNX29Q8TEQ0 813 aa21.79■■□□□ 1.08
LIMS2-207ENST00000409808 CAPZA3Q96KX2 299 aa21.79■■□□□ 1.08
LIMS2-207ENST00000409808 IFIH1Q9BYX4 1025 aaKnown RBP21.79■■□□□ 1.08
LIMS2-207ENST00000409808 SLC39A2Q9NP94 309 aa21.79■■□□□ 1.08
LIMS2-207ENST00000409808 COL20A1Q9P218 1284 aa21.79■■□□□ 1.08
LIMS2-207ENST00000409808 HPCAL4Q9UM19 191 aa21.79■■□□□ 1.08
LIMS2-207ENST00000409808 TFR2Q9UP52 801 aa21.79■■□□□ 1.08
LIMS2-207ENST00000409808 GLTPD2A6NH11 291 aa21.78■■□□□ 1.08
LIMS2-207ENST00000409808 VWA5AO00534 786 aa21.78■■□□□ 1.08
LIMS2-207ENST00000409808 RAD51AP2Q09MP3 1159 aa21.78■■□□□ 1.08
LIMS2-207ENST00000409808 SLC30A10Q6XR72 485 aa21.78■■□□□ 1.08
LIMS2-207ENST00000409808 USP50Q70EL3 339 aaPredicted RBP21.78■■□□□ 1.08
LIMS2-207ENST00000409808 TSG101Q99816 390 aa21.78■■□□□ 1.08
LIMS2-207ENST00000409808 MYMKA6NI61 221 aa21.78■■□□□ 1.08
LIMS2-207ENST00000409808 CYP27A1Q02318 531 aa21.78■■□□□ 1.08
LIMS2-207ENST00000409808 Q4G0T1 1027 aa21.78■■□□□ 1.08
LIMS2-207ENST00000409808 MOXD1Q6UVY6 613 aa21.78■■□□□ 1.08
LIMS2-207ENST00000409808 CDCA5Q96FF9 252 aa21.78■■□□□ 1.08
LIMS2-207ENST00000409808 ALS2CR12Q96Q35 445 aa21.78■■□□□ 1.08
LIMS2-207ENST00000409808 CTDP1Q9Y5B0 961 aaPredicted RBP21.78■■□□□ 1.08
LIMS2-207ENST00000409808 C19orf81C9J6K1 198 aa21.77■■□□□ 1.08
LIMS2-207ENST00000409808 PPP1R12BO60237 982 aaPredicted RBP21.77■■□□□ 1.08
LIMS2-207ENST00000409808 TCP1P17987 556 aaKnown RBP21.77■■□□□ 1.08
LIMS2-207ENST00000409808 TNNT3P45378 269 aaPredicted RBP21.77■■□□□ 1.08
LIMS2-207ENST00000409808 IRX5P78411 483 aaPredicted RBP21.77■■□□□ 1.08
LIMS2-207ENST00000409808 CCDC155Q8N6L0 562 aa21.77■■□□□ 1.08
LIMS2-207ENST00000409808 RAD54LQ92698 747 aa21.77■■□□□ 1.08
LIMS2-207ENST00000409808 CLMNQ96JQ2 1002 aa21.77■■□□□ 1.08
LIMS2-207ENST00000409808 C12orf42Q96LP6 360 aa21.77■■□□□ 1.08
LIMS2-207ENST00000409808 ARHGAP20Q9P2F6 1191 aa21.77■■□□□ 1.08
LIMS2-207ENST00000409808 MACROD2A1Z1Q3 448 aa21.77■■□□□ 1.07
LIMS2-207ENST00000409808 ZNF263O14978 683 aa21.77■■□□□ 1.07
LIMS2-207ENST00000409808 MSH4O15457 936 aa21.77■■□□□ 1.07
LIMS2-207ENST00000409808 PJA2O43164 708 aa21.77■■□□□ 1.07
LIMS2-207ENST00000409808 ZBED4O75132 1171 aa21.77■■□□□ 1.07
LIMS2-207ENST00000409808 CYP3A4P08684 503 aa21.77■■□□□ 1.07
LIMS2-207ENST00000409808 CIITAP33076 1130 aa21.77■■□□□ 1.07
LIMS2-207ENST00000409808 KIF11P52732 1056 aa21.77■■□□□ 1.07
LIMS2-207ENST00000409808 KRT79Q5XKE5 535 aa21.77■■□□□ 1.07
LIMS2-207ENST00000409808 KCNK18Q7Z418 384 aa21.77■■□□□ 1.07
LIMS2-207ENST00000409808 NUCKS1Q9H1E3 243 aaKnown RBP21.77■■□□□ 1.07
LIMS2-207ENST00000409808 DEF6Q9H4E7 631 aa21.77■■□□□ 1.07
LIMS2-207ENST00000409808 RIPK3Q9Y572 518 aa21.77■■□□□ 1.07
LIMS2-207ENST00000409808 WDR90Q96KV7 1748 aa21.76■■□□□ 1.07
LIMS2-207ENST00000409808 POTECB2RU33 542 aa21.76■■□□□ 1.07
LIMS2-207ENST00000409808 CREG2Q8IUH2 290 aa21.76■■□□□ 1.07
LIMS2-207ENST00000409808 ELP3Q9H9T3 547 aa21.76■■□□□ 1.07
LIMS2-207ENST00000409808 TMOD4Q9NZQ9 345 aa21.76■■□□□ 1.07
LIMS2-207ENST00000409808 DUSP10Q9Y6W6 482 aa21.76■■□□□ 1.07
LIMS2-207ENST00000409808 SYF2O95926 243 aaKnown RBP21.75■■□□□ 1.07
LIMS2-207ENST00000409808 HSD17B4P51659 736 aa21.75■■□□□ 1.07
LIMS2-207ENST00000409808 SLC20A2Q08357 652 aa21.75■■□□□ 1.07
LIMS2-207ENST00000409808 EEF2KMTQ96G04 330 aa21.75■■□□□ 1.07
LIMS2-207ENST00000409808 CRACR2AQ9BSW2 395 aa21.75■■□□□ 1.07
LIMS2-207ENST00000409808 IGLV3-22A0A075B6J6 115 aa21.75■■□□□ 1.07
LIMS2-207ENST00000409808 SSU72P8A0A1W2PR75 194 aa21.75■■□□□ 1.07
LIMS2-207ENST00000409808 PDE2AO00408 941 aaPredicted RBP21.75■■□□□ 1.07
LIMS2-207ENST00000409808 AKR1B10O60218 316 aa21.75■■□□□ 1.07
LIMS2-207ENST00000409808 RNF40O75150 1001 aa21.75■■□□□ 1.07
LIMS2-207ENST00000409808 EIF4A3P38919 411 aaKnown RBP21.75■■□□□ 1.07
LIMS2-207ENST00000409808 EHHADHQ08426 723 aa21.75■■□□□ 1.07
LIMS2-207ENST00000409808 MAPK8IP2Q13387 824 aaPredicted RBP21.75■■□□□ 1.07
LIMS2-207ENST00000409808 TMEM119Q4V9L6 283 aa21.75■■□□□ 1.07
LIMS2-207ENST00000409808 RNF10Q8N5U6 811 aaKnown RBP21.75■■□□□ 1.07
LIMS2-207ENST00000409808 TAF1DQ9H5J8 278 aaPredicted RBP21.75■■□□□ 1.07
LIMS2-207ENST00000409808 MMRN2Q9H8L6 949 aa21.75■■□□□ 1.07
LIMS2-207ENST00000409808 CSADQ9Y600 493 aa21.75■■□□□ 1.07
LIMS2-207ENST00000409808 PAPPA2Q9BXP8 1791 aa21.75■■□□□ 1.07
LIMS2-207ENST00000409808 TTLL12Q14166 644 aaPredicted RBP21.74■■□□□ 1.07
LIMS2-207ENST00000409808 CATSPERGQ6ZRH7 1159 aa21.74■■□□□ 1.07
LIMS2-207ENST00000409808 SLFN12Q8IYM2 578 aa21.74■■□□□ 1.07
LIMS2-207ENST00000409808 AFAP1L1Q8TED9 768 aa21.74■■□□□ 1.07
LIMS2-207ENST00000409808 SYN2Q92777 582 aaPredicted RBP21.74■■□□□ 1.07
LIMS2-207ENST00000409808 TRERF1Q96PN7 1200 aa21.74■■□□□ 1.07
LIMS2-207ENST00000409808 FAM204AQ9H8W3 233 aa21.74■■□□□ 1.07
LIMS2-207ENST00000409808 FAM184BQ9ULE4 1060 aa21.74■■□□□ 1.07
LIMS2-207ENST00000409808 HYOU1Q9Y4L1 999 aa21.74■■□□□ 1.07
LIMS2-207ENST00000409808 PTPRFP10586 1907 aa21.74■■□□□ 1.07
LIMS2-207ENST00000409808 SLC26A4O43511 780 aa21.74■■□□□ 1.07
LIMS2-207ENST00000409808 PRPF6O94906 941 aaKnown RBP21.74■■□□□ 1.07
LIMS2-207ENST00000409808 POTEIP0CG38 1075 aa21.74■■□□□ 1.07
LIMS2-207ENST00000409808 POTEJP0CG39 1038 aa21.74■■□□□ 1.07
LIMS2-207ENST00000409808 DSG3P32926 999 aa21.74■■□□□ 1.07
LIMS2-207ENST00000409808 SPIRE1Q08AE8 756 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms