RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 KCNA2P16389 499 aa10.52□□□□□ -0.73
NIF3L1-203ENST00000409129 ITGB5P18084 799 aa10.52□□□□□ -0.73
NIF3L1-203ENST00000409129 RXRAP19793 462 aa10.52□□□□□ -0.73
NIF3L1-203ENST00000409129 LIFRP42702 1097 aa10.52□□□□□ -0.73
NIF3L1-203ENST00000409129 IRX6P78412 446 aaPredicted RBP10.52□□□□□ -0.73
NIF3L1-203ENST00000409129 GPM6BQ13491 265 aa10.52□□□□□ -0.73
NIF3L1-203ENST00000409129 PTPROQ16827 1216 aa10.52□□□□□ -0.73
NIF3L1-203ENST00000409129 PUS10Q3MIT2 529 aaKnown RBP10.52□□□□□ -0.73
NIF3L1-203ENST00000409129 RPAINQ86UA6 219 aa10.52□□□□□ -0.73
NIF3L1-203ENST00000409129 TMEM192Q8IY95 271 aa10.52□□□□□ -0.73
NIF3L1-203ENST00000409129 EDAQ92838 391 aa10.52□□□□□ -0.73
NIF3L1-203ENST00000409129 PABPC5Q96DU9 382 aaKnown RBP10.52□□□□□ -0.73
NIF3L1-203ENST00000409129 IFIH1Q9BYX4 1025 aaKnown RBP10.52□□□□□ -0.73
NIF3L1-203ENST00000409129 CLDND1Q9NY35 253 aa10.52□□□□□ -0.73
NIF3L1-203ENST00000409129 PRKAG3Q9UGI9 489 aa10.52□□□□□ -0.73
NIF3L1-203ENST00000409129 UBIAD1Q9Y5Z9 338 aa10.52□□□□□ -0.73
NIF3L1-203ENST00000409129 EPG5Q9HCE0 2579 aa10.51□□□□□ -0.73
NIF3L1-203ENST00000409129 hCG_1642624A0A1W2PR95 340 aa10.51□□□□□ -0.73
NIF3L1-203ENST00000409129 MAFGO15525 162 aa10.51□□□□□ -0.73
NIF3L1-203ENST00000409129 PPFIA1Q13136 1202 aa10.51□□□□□ -0.73
NIF3L1-203ENST00000409129 MTMR1Q13613 665 aa10.51□□□□□ -0.73
NIF3L1-203ENST00000409129 COL9A3Q14050 684 aaPredicted RBP10.51□□□□□ -0.73
NIF3L1-203ENST00000409129 NECTIN1Q15223 517 aa10.51□□□□□ -0.73
NIF3L1-203ENST00000409129 UBE2SQ16763 222 aa10.51□□□□□ -0.73
NIF3L1-203ENST00000409129 TAF2Q6P1X5 1199 aa10.51□□□□□ -0.73
NIF3L1-203ENST00000409129 RUFY4Q6ZNE9 571 aa10.51□□□□□ -0.73
NIF3L1-203ENST00000409129 RSPH3Q86UC2 560 aa10.51□□□□□ -0.73
NIF3L1-203ENST00000409129 CCDC82Q8N4S0 544 aa10.51□□□□□ -0.73
NIF3L1-203ENST00000409129 PDCD7Q8N8D1 485 aaKnown RBP10.51□□□□□ -0.73
NIF3L1-203ENST00000409129 FANCBQ8NB91 859 aa10.51□□□□□ -0.73
NIF3L1-203ENST00000409129 BANK1Q8NDB2 785 aa10.51□□□□□ -0.73
NIF3L1-203ENST00000409129 ATOH1Q92858 354 aaPredicted RBP10.51□□□□□ -0.73
NIF3L1-203ENST00000409129 IL17RAQ96F46 866 aa10.51□□□□□ -0.73
NIF3L1-203ENST00000409129 SMARCAD1Q9H4L7 1026 aa10.51□□□□□ -0.73
NIF3L1-203ENST00000409129 EHMT1Q9H9B1 1298 aa10.51□□□□□ -0.73
NIF3L1-203ENST00000409129 JADE2Q9NQC1 790 aa10.51□□□□□ -0.73
NIF3L1-203ENST00000409129 ERAP1Q9NZ08 941 aa10.51□□□□□ -0.73
NIF3L1-203ENST00000409129 PCDHA6Q9UN73 950 aa10.51□□□□□ -0.73
NIF3L1-203ENST00000409129 PCDHA8Q9Y5H6 950 aa10.51□□□□□ -0.73
NIF3L1-203ENST00000409129 SLC12A7Q9Y666 1083 aa10.51□□□□□ -0.73
NIF3L1-203ENST00000409129 MBLAC1A4D2B0 266 aaPredicted RBP10.5□□□□□ -0.73
NIF3L1-203ENST00000409129 SPDYE3A6NKU9 549 aa10.5□□□□□ -0.73
NIF3L1-203ENST00000409129 H0Y858 1186 aa10.5□□□□□ -0.73
NIF3L1-203ENST00000409129 ENPP3O14638 875 aa10.5□□□□□ -0.73
NIF3L1-203ENST00000409129 CSPG5O95196 566 aa10.5□□□□□ -0.73
NIF3L1-203ENST00000409129 GHRP10912 638 aa10.5□□□□□ -0.73
NIF3L1-203ENST00000409129 MARK3P27448 753 aa10.5□□□□□ -0.73
NIF3L1-203ENST00000409129 GTF2F1P35269 517 aaKnown RBP eCLIP10.5□□□□□ -0.73
NIF3L1-203ENST00000409129 MGAT3Q09327 533 aa10.5□□□□□ -0.73
NIF3L1-203ENST00000409129 LPIN1Q14693 890 aa10.5□□□□□ -0.73
NIF3L1-203ENST00000409129 COL19A1Q14993 1142 aa10.5□□□□□ -0.73
NIF3L1-203ENST00000409129 GRIK4Q16099 956 aa10.5□□□□□ -0.73
NIF3L1-203ENST00000409129 TIGD5Q53EQ6 642 aa10.5□□□□□ -0.73
NIF3L1-203ENST00000409129 MARCH8Q5T0T0 291 aa10.5□□□□□ -0.73
NIF3L1-203ENST00000409129 CREB3L3Q68CJ9 461 aa10.5□□□□□ -0.73
NIF3L1-203ENST00000409129 TRIM67Q6ZTA4 783 aa10.5□□□□□ -0.73
NIF3L1-203ENST00000409129 TMTC3Q6ZXV5 915 aa10.5□□□□□ -0.73
NIF3L1-203ENST00000409129 BMP8AQ7Z5Y6 402 aa10.5□□□□□ -0.73
NIF3L1-203ENST00000409129 SGMS1Q86VZ5 419 aa10.5□□□□□ -0.73
NIF3L1-203ENST00000409129 RAB11FIP4Q86YS3 637 aa10.5□□□□□ -0.73
NIF3L1-203ENST00000409129 SUGP1Q8IWZ8 645 aaKnown RBP10.5□□□□□ -0.73
NIF3L1-203ENST00000409129 FIBCD1Q8N539 461 aa10.5□□□□□ -0.73
NIF3L1-203ENST00000409129 DNAJB3Q8WWF6 145 aa10.5□□□□□ -0.73
NIF3L1-203ENST00000409129 GLG1Q92896 1179 aa10.5□□□□□ -0.73
NIF3L1-203ENST00000409129 ESYT1Q9BSJ8 1104 aa10.5□□□□□ -0.73
NIF3L1-203ENST00000409129 LRRC2Q9BYS8 371 aa10.5□□□□□ -0.73
NIF3L1-203ENST00000409129 UPF3BQ9BZI7 483 aaKnown RBP10.5□□□□□ -0.73
NIF3L1-203ENST00000409129 TLR9Q9NR96 1032 aa10.5□□□□□ -0.73
NIF3L1-203ENST00000409129 PKD2L1Q9P0L9 805 aa10.5□□□□□ -0.73
NIF3L1-203ENST00000409129 TUBE1Q9UJT0 475 aa10.5□□□□□ -0.73
NIF3L1-203ENST00000409129 TPRP12270 2363 aaKnown RBP10.5□□□□□ -0.73
NIF3L1-203ENST00000409129 DOCK5Q9H7D0 1870 aa10.49□□□□□ -0.73
NIF3L1-203ENST00000409129 RRN3P2A6NIE6 340 aa10.49□□□□□ -0.73
NIF3L1-203ENST00000409129 MBTPS2O43462 519 aa10.49□□□□□ -0.73
NIF3L1-203ENST00000409129 RB1P06400 928 aa10.49□□□□□ -0.73
NIF3L1-203ENST00000409129 SMAD2Q15796 467 aaKnown RBP10.49□□□□□ -0.73
NIF3L1-203ENST00000409129 FBXO47Q5MNV8 452 aa10.49□□□□□ -0.73
NIF3L1-203ENST00000409129 SYNE3Q6ZMZ3 975 aa10.49□□□□□ -0.73
NIF3L1-203ENST00000409129 HEATR3Q7Z4Q2 680 aa10.49□□□□□ -0.73
NIF3L1-203ENST00000409129 FBXL6Q8N531 539 aa10.49□□□□□ -0.73
NIF3L1-203ENST00000409129 MXRA8Q9BRK3 442 aa10.49□□□□□ -0.73
NIF3L1-203ENST00000409129 SCUBE2Q9NQ36 999 aa10.49□□□□□ -0.73
NIF3L1-203ENST00000409129 PLXNA4Q9HCM2 1894 aa10.49□□□□□ -0.73
NIF3L1-203ENST00000409129 NCOR2Q9Y618 2525 aa10.48□□□□□ -0.73
NIF3L1-203ENST00000409129 ZNF292O60281 2723 aa10.48□□□□□ -0.73
NIF3L1-203ENST00000409129 MED19A0JLT2 244 aaPredicted RBP10.48□□□□□ -0.73
NIF3L1-203ENST00000409129 C5orf67F2Z3F1 127 aa10.48□□□□□ -0.73
NIF3L1-203ENST00000409129 LINC01565O15544 149 aa10.48□□□□□ -0.73
NIF3L1-203ENST00000409129 TBX10O75333 385 aa10.48□□□□□ -0.73
NIF3L1-203ENST00000409129 RPLP2P05387 115 aaKnown RBP10.48□□□□□ -0.73
NIF3L1-203ENST00000409129 LINC00271P0C7V0 271 aa10.48□□□□□ -0.73
NIF3L1-203ENST00000409129 INSRRP14616 1297 aa10.48□□□□□ -0.73
NIF3L1-203ENST00000409129 CTNNB1P35222 781 aa10.48□□□□□ -0.73
NIF3L1-203ENST00000409129 BMPR1AP36894 532 aa10.48□□□□□ -0.73
NIF3L1-203ENST00000409129 IGBP1P78318 339 aa10.48□□□□□ -0.73
NIF3L1-203ENST00000409129 MRPS6P82932 125 aaKnown RBP10.48□□□□□ -0.73
NIF3L1-203ENST00000409129 IER5Q5VY09 327 aa10.48□□□□□ -0.73
NIF3L1-203ENST00000409129 TSHZ1Q6ZSZ6 1077 aa10.48□□□□□ -0.73
NIF3L1-203ENST00000409129 MICU3Q86XE3 530 aa10.48□□□□□ -0.73
NIF3L1-203ENST00000409129 TNPO1Q92973 898 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms