RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 ATP9AO75110 1047 aa14.08□□□□□ -0.16
APOBEC3B-204ENST00000407298 SRGAP2BP0DMP2 458 aa14.08□□□□□ -0.16
APOBEC3B-204ENST00000407298 INSRRP14616 1297 aa14.08□□□□□ -0.16
APOBEC3B-204ENST00000407298 ATF7P17544 494 aaPredicted RBP14.08□□□□□ -0.16
APOBEC3B-204ENST00000407298 SPOUT1Q5T280 376 aaKnown RBP14.08□□□□□ -0.16
APOBEC3B-204ENST00000407298 CRIPAKQ8N1N5 446 aa14.08□□□□□ -0.16
APOBEC3B-204ENST00000407298 PRSS33Q8NF86 280 aa14.08□□□□□ -0.16
APOBEC3B-204ENST00000407298 FAM49AQ9H0Q0 323 aaPredicted RBP14.08□□□□□ -0.16
APOBEC3B-204ENST00000407298 PADI3Q9ULW8 664 aa14.08□□□□□ -0.16
APOBEC3B-204ENST00000407298 USP15Q9Y4E8 981 aaPredicted RBP14.08□□□□□ -0.16
APOBEC3B-204ENST00000407298 TELO2Q9Y4R8 837 aa14.08□□□□□ -0.16
APOBEC3B-204ENST00000407298 PCDHB7Q9Y5E2 793 aa14.08□□□□□ -0.16
APOBEC3B-204ENST00000407298 PCDHA2Q9Y5H9 948 aa14.08□□□□□ -0.16
APOBEC3B-204ENST00000407298 ZFHX2Q9C0A1 2572 aaPredicted RBP14.07□□□□□ -0.16
APOBEC3B-204ENST00000407298 SPDYE3A6NKU9 549 aa14.07□□□□□ -0.16
APOBEC3B-204ENST00000407298 DDAH1O94760 285 aa14.07□□□□□ -0.16
APOBEC3B-204ENST00000407298 CYP21A2P08686 494 aa14.07□□□□□ -0.16
APOBEC3B-204ENST00000407298 DNAJB1P25685 340 aa14.07□□□□□ -0.16
APOBEC3B-204ENST00000407298 SIGLEC14Q08ET2 396 aa14.07□□□□□ -0.16
APOBEC3B-204ENST00000407298 PAN2Q504Q3 1202 aaKnown RBP14.07□□□□□ -0.16
APOBEC3B-204ENST00000407298 ADGRD2Q7Z7M1 963 aa14.07□□□□□ -0.16
APOBEC3B-204ENST00000407298 RBM23Q86U06 439 aaKnown RBP14.07□□□□□ -0.16
APOBEC3B-204ENST00000407298 RTN4RL1Q86UN2 441 aaPredicted RBP14.07□□□□□ -0.16
APOBEC3B-204ENST00000407298 TMTC2Q8N394 836 aa14.07□□□□□ -0.16
APOBEC3B-204ENST00000407298 LINC01599Q8WXQ3 324 aa14.07□□□□□ -0.16
APOBEC3B-204ENST00000407298 SNX27Q96L92 541 aa14.07□□□□□ -0.16
APOBEC3B-204ENST00000407298 CELF4Q9BZC1 486 aaKnown RBP14.07□□□□□ -0.16
APOBEC3B-204ENST00000407298 IL25Q9H293 177 aa14.07□□□□□ -0.16
APOBEC3B-204ENST00000407298 JADE2Q9NQC1 790 aa14.07□□□□□ -0.16
APOBEC3B-204ENST00000407298 TRPC6Q9Y210 931 aa14.07□□□□□ -0.16
APOBEC3B-204ENST00000407298 UBIAD1Q9Y5Z9 338 aa14.07□□□□□ -0.16
APOBEC3B-204ENST00000407298 DOCK5Q9H7D0 1870 aa14.07□□□□□ -0.16
APOBEC3B-204ENST00000407298 IGSF9BQ9UPX0 1349 aa14.07□□□□□ -0.16
APOBEC3B-204ENST00000407298 ATG2AQ2TAZ0 1938 aa14.06□□□□□ -0.16
APOBEC3B-204ENST00000407298 SMIM35A0A1B0GVV1 85 aa14.06□□□□□ -0.16
APOBEC3B-204ENST00000407298 E7EWF7 191 aa14.06□□□□□ -0.16
APOBEC3B-204ENST00000407298 ITGB5P18084 799 aa14.06□□□□□ -0.16
APOBEC3B-204ENST00000407298 SARSP49591 514 aaKnown RBP14.06□□□□□ -0.16
APOBEC3B-204ENST00000407298 NUBP1P53384 320 aa14.06□□□□□ -0.16
APOBEC3B-204ENST00000407298 KRT76Q01546 638 aa14.06□□□□□ -0.16
APOBEC3B-204ENST00000407298 IER5LQ5T953 404 aa14.06□□□□□ -0.16
APOBEC3B-204ENST00000407298 TTC22Q5TAA0 569 aa14.06□□□□□ -0.16
APOBEC3B-204ENST00000407298 CASC1Q6TDU7 716 aa14.06□□□□□ -0.16
APOBEC3B-204ENST00000407298 PLPPR4Q7Z2D5 763 aa14.06□□□□□ -0.16
APOBEC3B-204ENST00000407298 IGDCC4Q8TDY8 1250 aa14.06□□□□□ -0.16
APOBEC3B-204ENST00000407298 RPGRIP1Q96KN7 1286 aa14.06□□□□□ -0.16
APOBEC3B-204ENST00000407298 NEK1Q96PY6 1258 aa14.06□□□□□ -0.16
APOBEC3B-204ENST00000407298 SDF4Q9BRK5 362 aa14.06□□□□□ -0.16
APOBEC3B-204ENST00000407298 MTA3Q9BTC8 594 aa14.06□□□□□ -0.16
APOBEC3B-204ENST00000407298 SENP2Q9HC62 589 aa14.06□□□□□ -0.16
APOBEC3B-204ENST00000407298 JPH1Q9HDC5 661 aaPredicted RBP14.06□□□□□ -0.16
APOBEC3B-204ENST00000407298 TLR9Q9NR96 1032 aa14.06□□□□□ -0.16
APOBEC3B-204ENST00000407298 SLC9A2Q9UBY0 812 aa14.06□□□□□ -0.16
APOBEC3B-204ENST00000407298 BARX2Q9UMQ3 279 aaPredicted RBP14.06□□□□□ -0.16
APOBEC3B-204ENST00000407298 KDM3AQ9Y4C1 1321 aa14.06□□□□□ -0.16
APOBEC3B-204ENST00000407298 PPFIA3O75145 1194 aa14.05□□□□□ -0.16
APOBEC3B-204ENST00000407298 SLC26A2P50443 739 aa14.05□□□□□ -0.16
APOBEC3B-204ENST00000407298 TEX2Q8IWB9 1127 aa14.05□□□□□ -0.16
APOBEC3B-204ENST00000407298 ZNF654Q8IZM8 581 aa14.05□□□□□ -0.16
APOBEC3B-204ENST00000407298 ATP8B4Q8TF62 1192 aa14.05□□□□□ -0.16
APOBEC3B-204ENST00000407298 C1orf112Q9NSG2 853 aa14.05□□□□□ -0.16
APOBEC3B-204ENST00000407298 PUF60Q9UHX1 559 aaKnown RBP14.05□□□□□ -0.16
APOBEC3B-204ENST00000407298 CACNA1HO95180 2353 aa14.04□□□□□ -0.16
APOBEC3B-204ENST00000407298 DENND3A2RUS2 1198 aa14.04□□□□□ -0.16
APOBEC3B-204ENST00000407298 GLP2RO95838 553 aa14.04□□□□□ -0.16
APOBEC3B-204ENST00000407298 CALM1P0DP23 149 aa14.04□□□□□ -0.16
APOBEC3B-204ENST00000407298 CALM2P0DP24 149 aa14.04□□□□□ -0.16
APOBEC3B-204ENST00000407298 CALM3P0DP25 149 aa14.04□□□□□ -0.16
APOBEC3B-204ENST00000407298 STAT5BP51692 787 aa14.04□□□□□ -0.16
APOBEC3B-204ENST00000407298 TMEM62Q0P6H9 643 aa14.04□□□□□ -0.16
APOBEC3B-204ENST00000407298 TCF15Q12870 199 aa14.04□□□□□ -0.16
APOBEC3B-204ENST00000407298 NFX1Q12986 1120 aaKnown RBP14.04□□□□□ -0.16
APOBEC3B-204ENST00000407298 NFXL1Q6ZNB6 911 aa14.04□□□□□ -0.16
APOBEC3B-204ENST00000407298 SUSD6Q92537 303 aa14.04□□□□□ -0.16
APOBEC3B-204ENST00000407298 PHOX2BQ99453 314 aa14.04□□□□□ -0.16
APOBEC3B-204ENST00000407298 PKD2L1Q9P0L9 805 aa14.04□□□□□ -0.16
APOBEC3B-204ENST00000407298 PCDHA6Q9UN73 950 aa14.04□□□□□ -0.16
APOBEC3B-204ENST00000407298 PCDHA8Q9Y5H6 950 aa14.04□□□□□ -0.16
APOBEC3B-204ENST00000407298 USP34Q70CQ2 3546 aa14.03□□□□□ -0.16
APOBEC3B-204ENST00000407298 CCDC69A6NI79 296 aa14.03□□□□□ -0.16
APOBEC3B-204ENST00000407298 TBKBP1A7MCY6 615 aa14.03□□□□□ -0.16
APOBEC3B-204ENST00000407298 GPR182O15218 404 aa14.03□□□□□ -0.16
APOBEC3B-204ENST00000407298 RPS6KA5O75582 802 aa14.03□□□□□ -0.16
APOBEC3B-204ENST00000407298 FGF18O76093 207 aa14.03□□□□□ -0.16
APOBEC3B-204ENST00000407298 HOXB8P17481 243 aaPredicted RBP14.03□□□□□ -0.16
APOBEC3B-204ENST00000407298 ACTR2P61160 394 aa14.03□□□□□ -0.16
APOBEC3B-204ENST00000407298 PLCB4Q15147 1175 aa14.03□□□□□ -0.16
APOBEC3B-204ENST00000407298 PTPN21Q16825 1174 aa14.03□□□□□ -0.16
APOBEC3B-204ENST00000407298 DUSP6Q16828 381 aa14.03□□□□□ -0.16
APOBEC3B-204ENST00000407298 MTHFD1LQ6UB35 978 aa14.03□□□□□ -0.16
APOBEC3B-204ENST00000407298 TMEM184AQ6ZMB5 413 aa14.03□□□□□ -0.16
APOBEC3B-204ENST00000407298 SLC24A5Q71RS6 500 aa14.03□□□□□ -0.16
APOBEC3B-204ENST00000407298 ZBTB33Q86T24 672 aa14.03□□□□□ -0.16
APOBEC3B-204ENST00000407298 THNSL1Q8IYQ7 743 aa14.03□□□□□ -0.16
APOBEC3B-204ENST00000407298 ATOH1Q92858 354 aaPredicted RBP14.03□□□□□ -0.16
APOBEC3B-204ENST00000407298 PCYT2Q99447 389 aa14.03□□□□□ -0.16
APOBEC3B-204ENST00000407298 MXRA8Q9BRK3 442 aa14.03□□□□□ -0.16
APOBEC3B-204ENST00000407298 RGS18Q9NS28 235 aa14.03□□□□□ -0.16
APOBEC3B-204ENST00000407298 TMEM260Q9NX78 707 aa14.03□□□□□ -0.16
APOBEC3B-204ENST00000407298 LZTS1Q9Y250 596 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms