RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 WRAP73Q9P2S5 460 aaPredicted RBP19.3■□□□□ 0.68
PTCHD3P3-201ENST00000403073 TBX21Q9UL17 535 aa19.3■□□□□ 0.68
PTCHD3P3-201ENST00000403073 CEP131Q9UPN4 1083 aa19.3■□□□□ 0.68
PTCHD3P3-201ENST00000403073 DDX11L8A8MPP1 907 aa19.29■□□□□ 0.68
PTCHD3P3-201ENST00000403073 H0YGN5 161 aa19.29■□□□□ 0.68
PTCHD3P3-201ENST00000403073 KIAA0355O15063 1070 aa19.29■□□□□ 0.68
PTCHD3P3-201ENST00000403073 OATP04181 439 aa19.29■□□□□ 0.68
PTCHD3P3-201ENST00000403073 GNAT1P11488 350 aa19.29■□□□□ 0.68
PTCHD3P3-201ENST00000403073 ITGB8P26012 769 aa19.29■□□□□ 0.68
PTCHD3P3-201ENST00000403073 ADAM17P78536 824 aa19.29■□□□□ 0.68
PTCHD3P3-201ENST00000403073 PTPAQ15257 358 aa19.29■□□□□ 0.68
PTCHD3P3-201ENST00000403073 MARCH8Q5T0T0 291 aa19.29■□□□□ 0.68
PTCHD3P3-201ENST00000403073 TPH2Q8IWU9 490 aa19.29■□□□□ 0.68
PTCHD3P3-201ENST00000403073 TNPO1Q92973 898 aaKnown RBP19.29■□□□□ 0.68
PTCHD3P3-201ENST00000403073 LRWD1Q9UFC0 647 aa19.29■□□□□ 0.68
PTCHD3P3-201ENST00000403073 PRKAG2Q9UGJ0 569 aa19.29■□□□□ 0.68
PTCHD3P3-201ENST00000403073 RBM19Q9Y4C8 960 aaKnown RBP19.29■□□□□ 0.68
PTCHD3P3-201ENST00000403073 TMEM150BA6NC51 233 aa19.28■□□□□ 0.68
PTCHD3P3-201ENST00000403073 VWA3AA6NCI4 1184 aa19.28■□□□□ 0.68
PTCHD3P3-201ENST00000403073 RRN3P2A6NIE6 340 aa19.28■□□□□ 0.68
PTCHD3P3-201ENST00000403073 BMP15O95972 392 aa19.28■□□□□ 0.68
PTCHD3P3-201ENST00000403073 DDIT3P35638 169 aa19.28■□□□□ 0.68
PTCHD3P3-201ENST00000403073 PDIA5Q14554 519 aa19.28■□□□□ 0.68
PTCHD3P3-201ENST00000403073 ARL6IP4Q66PJ3 421 aaKnown RBP19.28■□□□□ 0.68
PTCHD3P3-201ENST00000403073 DHX38Q92620 1227 aaKnown RBP19.28■□□□□ 0.68
PTCHD3P3-201ENST00000403073 WNT8BQ93098 351 aa19.28■□□□□ 0.68
PTCHD3P3-201ENST00000403073 FAM167AQ96KS9 214 aa19.28■□□□□ 0.68
PTCHD3P3-201ENST00000403073 ZNF396Q96N95 335 aaPredicted RBP19.28■□□□□ 0.68
PTCHD3P3-201ENST00000403073 LXNQ9BS40 222 aa19.28■□□□□ 0.68
PTCHD3P3-201ENST00000403073 PPP1R12CQ9BZL4 782 aa19.28■□□□□ 0.68
PTCHD3P3-201ENST00000403073 SCN10AQ9Y5Y9 1956 aa19.28■□□□□ 0.68
PTCHD3P3-201ENST00000403073 A0A087WWV3 80 aa19.27■□□□□ 0.68
PTCHD3P3-201ENST00000403073 PP2D1A8MPX8 630 aa19.27■□□□□ 0.68
PTCHD3P3-201ENST00000403073 ZBTB42B2RXF5 422 aa19.27■□□□□ 0.68
PTCHD3P3-201ENST00000403073 ZBTB39O15060 712 aa19.27■□□□□ 0.68
PTCHD3P3-201ENST00000403073 MED24O75448 989 aa19.27■□□□□ 0.68
PTCHD3P3-201ENST00000403073 SPATA31C1P0DKV0 1188 aa19.27■□□□□ 0.68
PTCHD3P3-201ENST00000403073 CDC25AP30304 524 aa19.27■□□□□ 0.68
PTCHD3P3-201ENST00000403073 PTK7Q13308 1070 aa19.27■□□□□ 0.68
PTCHD3P3-201ENST00000403073 XKR3Q5GH77 459 aa19.27■□□□□ 0.68
PTCHD3P3-201ENST00000403073 ZNF484Q5JVG2 852 aa19.27■□□□□ 0.68
PTCHD3P3-201ENST00000403073 SERINC5Q86VE9 423 aa19.27■□□□□ 0.68
PTCHD3P3-201ENST00000403073 IGSF22Q8N9C0 903 aa19.27■□□□□ 0.68
PTCHD3P3-201ENST00000403073 SH2D3AQ9BRG2 576 aa19.27■□□□□ 0.68
PTCHD3P3-201ENST00000403073 NOC4LQ9BVI4 516 aaKnown RBP19.27■□□□□ 0.68
PTCHD3P3-201ENST00000403073 ZSWIM4Q9H7M6 989 aa19.27■□□□□ 0.68
PTCHD3P3-201ENST00000403073 SEPT9Q9UHD8 586 aaPredicted RBP19.27■□□□□ 0.68
PTCHD3P3-201ENST00000403073 UMODL1Q5DID0 1318 aa19.26■□□□□ 0.67
PTCHD3P3-201ENST00000403073 MBLAC1A4D2B0 266 aaPredicted RBP19.26■□□□□ 0.67
PTCHD3P3-201ENST00000403073 DKC1O60832 514 aaKnown RBP eCLIP19.26■□□□□ 0.67
PTCHD3P3-201ENST00000403073 TIMP1P01033 207 aa19.26■□□□□ 0.67
PTCHD3P3-201ENST00000403073 RAG1P15918 1043 aa19.26■□□□□ 0.67
PTCHD3P3-201ENST00000403073 KLRC1P26715 233 aa19.26■□□□□ 0.67
PTCHD3P3-201ENST00000403073 MARCKSP29966 332 aaPredicted RBP19.26■□□□□ 0.67
PTCHD3P3-201ENST00000403073 CYP2C18P33260 490 aa19.26■□□□□ 0.67
PTCHD3P3-201ENST00000403073 GRIN1Q05586 938 aa19.26■□□□□ 0.67
PTCHD3P3-201ENST00000403073 RUFY4Q6ZNE9 571 aa19.26■□□□□ 0.67
PTCHD3P3-201ENST00000403073 ANO5Q75V66 913 aa19.26■□□□□ 0.67
PTCHD3P3-201ENST00000403073 CATSPER3Q86XQ3 398 aa19.26■□□□□ 0.67
PTCHD3P3-201ENST00000403073 C4orf19Q8IY42 314 aa19.26■□□□□ 0.67
PTCHD3P3-201ENST00000403073 ERMNQ8TAM6 284 aa19.26■□□□□ 0.67
PTCHD3P3-201ENST00000403073 NEK9Q8TD19 979 aa19.26■□□□□ 0.67
PTCHD3P3-201ENST00000403073 NIFKQ9BYG3 293 aaKnown RBP19.26■□□□□ 0.67
PTCHD3P3-201ENST00000403073 RAB34Q9BZG1 259 aa19.26■□□□□ 0.67
PTCHD3P3-201ENST00000403073 HIPK3Q9H422 1215 aa19.26■□□□□ 0.67
PTCHD3P3-201ENST00000403073 TUBE1Q9UJT0 475 aa19.26■□□□□ 0.67
PTCHD3P3-201ENST00000403073 DNAH12Q6ZR08 3092 aa19.26■□□□□ 0.67
PTCHD3P3-201ENST00000403073 NASPP49321 788 aaPredicted RBP19.25■□□□□ 0.67
PTCHD3P3-201ENST00000403073 DNM1Q05193 864 aaKnown RBP19.25■□□□□ 0.67
PTCHD3P3-201ENST00000403073 SLC39A14Q15043 492 aa19.25■□□□□ 0.67
PTCHD3P3-201ENST00000403073 TRIM71Q2Q1W2 868 aaKnown RBP19.25■□□□□ 0.67
PTCHD3P3-201ENST00000403073 MTERF2Q49AM1 385 aa19.25■□□□□ 0.67
PTCHD3P3-201ENST00000403073 PLA2G4FQ68DD2 849 aa19.25■□□□□ 0.67
PTCHD3P3-201ENST00000403073 MTHFD1LQ6UB35 978 aa19.25■□□□□ 0.67
PTCHD3P3-201ENST00000403073 ZNF579Q8NAF0 562 aaKnown RBP19.25■□□□□ 0.67
PTCHD3P3-201ENST00000403073 BADQ92934 168 aa19.25■□□□□ 0.67
PTCHD3P3-201ENST00000403073 CHAMP1Q96JM3 812 aa19.25■□□□□ 0.67
PTCHD3P3-201ENST00000403073 POLR3CQ9BUI4 534 aaPredicted RBP19.25■□□□□ 0.67
PTCHD3P3-201ENST00000403073 TUFT1Q9NNX1 390 aa19.25■□□□□ 0.67
PTCHD3P3-201ENST00000403073 COL1A2P08123 1366 aa19.24■□□□□ 0.67
PTCHD3P3-201ENST00000403073 ALPK3Q96L96 1907 aa19.24■□□□□ 0.67
PTCHD3P3-201ENST00000403073 RPA1P27694 616 aa19.24■□□□□ 0.67
PTCHD3P3-201ENST00000403073 YWHABP31946 246 aaKnown RBP19.24■□□□□ 0.67
PTCHD3P3-201ENST00000403073 CCT6AP40227 531 aaKnown RBP19.24■□□□□ 0.67
PTCHD3P3-201ENST00000403073 CCL23P55773 120 aa19.24■□□□□ 0.67
PTCHD3P3-201ENST00000403073 NPEPPSP55786 919 aa19.24■□□□□ 0.67
PTCHD3P3-201ENST00000403073 MDM2Q00987 491 aaPredicted RBP19.24■□□□□ 0.67
PTCHD3P3-201ENST00000403073 BFSP2Q13515 415 aa19.24■□□□□ 0.67
PTCHD3P3-201ENST00000403073 STK38Q15208 465 aa19.24■□□□□ 0.67
PTCHD3P3-201ENST00000403073 TARBP2Q15633 366 aaKnown RBP19.24■□□□□ 0.67
PTCHD3P3-201ENST00000403073 FBXO2Q9UK22 296 aaPredicted RBP19.24■□□□□ 0.67
PTCHD3P3-201ENST00000403073 PCDHA2Q9Y5H9 948 aa19.24■□□□□ 0.67
PTCHD3P3-201ENST00000403073 RBAK-RBAKDNI3L0D1 243 aa19.23■□□□□ 0.67
PTCHD3P3-201ENST00000403073 TNRC18O15417 2968 aaPredicted RBP19.23■□□□□ 0.67
PTCHD3P3-201ENST00000403073 LYPLA2O95372 231 aa19.23■□□□□ 0.67
PTCHD3P3-201ENST00000403073 C22orf31O95567 290 aa19.23■□□□□ 0.67
PTCHD3P3-201ENST00000403073 CKBP12277 381 aa19.23■□□□□ 0.67
PTCHD3P3-201ENST00000403073 THPOP40225 353 aa19.23■□□□□ 0.67
PTCHD3P3-201ENST00000403073 NUCB2P80303 420 aa19.23■□□□□ 0.67
PTCHD3P3-201ENST00000403073 ECM1Q16610 540 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms