RNA–Protein interactions for RNA: ENST00000399451.6

ANKRD28-201, Transcript of ankyrin repeat domain 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ANKRD28, Length 6,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-201ENST00000399451 SPDYE1Q8NFV5 336 aaPredicted RBP23.07■■□□□ 1.28
ANKRD28-201ENST00000399451 TBK1Q9UHD2 729 aa23.07■■□□□ 1.28
ANKRD28-201ENST00000399451 FNDC3AQ9Y2H6 1198 aaKnown RBP23.07■■□□□ 1.28
ANKRD28-201ENST00000399451 SHROOM2Q13796 1616 aa23.07■■□□□ 1.28
ANKRD28-201ENST00000399451 BNIP3LO60238 219 aa23.06■■□□□ 1.28
ANKRD28-201ENST00000399451 EIF2AK2P19525 551 aaKnown RBP23.06■■□□□ 1.28
ANKRD28-201ENST00000399451 MECOMQ03112 1051 aa23.06■■□□□ 1.28
ANKRD28-201ENST00000399451 HSP90AA5PQ58FG0 334 aa23.06■■□□□ 1.28
ANKRD28-201ENST00000399451 RPF1Q9H9Y2 349 aaKnown RBP23.06■■□□□ 1.28
ANKRD28-201ENST00000399451 PRDM15P57071 1507 aaPredicted RBP23.06■■□□□ 1.28
ANKRD28-201ENST00000399451 CYP2D7A0A087X1C5 515 aa23.06■■□□□ 1.28
ANKRD28-201ENST00000399451 FBXO38Q6PIJ6 1188 aa23.06■■□□□ 1.28
ANKRD28-201ENST00000399451 MCUQ8NE86 351 aa23.06■■□□□ 1.28
ANKRD28-201ENST00000399451 ATP6V1E2Q96A05 226 aa23.06■■□□□ 1.28
ANKRD28-201ENST00000399451 GDAP1Q8TB36 358 aa23.06■■□□□ 1.28
ANKRD28-201ENST00000399451 KDM6BO15054 1643 aa23.06■■□□□ 1.28
ANKRD28-201ENST00000399451 SMIM24O75264 130 aa23.06■■□□□ 1.28
ANKRD28-201ENST00000399451 TRIP13Q15645 432 aaPredicted RBP23.06■■□□□ 1.28
ANKRD28-201ENST00000399451 TSPYL2Q9H2G4 693 aaPredicted RBP23.06■■□□□ 1.28
ANKRD28-201ENST00000399451 ARL4AP40617 200 aa23.05■■□□□ 1.28
ANKRD28-201ENST00000399451 IQCB1Q15051 598 aa23.05■■□□□ 1.28
ANKRD28-201ENST00000399451 FAF1Q9UNN5 650 aaPredicted RBP23.05■■□□□ 1.28
ANKRD28-201ENST00000399451 EXOC1LA0A1B0GW35 172 aa23.05■■□□□ 1.28
ANKRD28-201ENST00000399451 DDIT3P35638 169 aa23.05■■□□□ 1.28
ANKRD28-201ENST00000399451 PDCD7Q8N8D1 485 aaKnown RBP23.05■■□□□ 1.28
ANKRD28-201ENST00000399451 WDR64B1ANS9 1081 aa23.05■■□□□ 1.28
ANKRD28-201ENST00000399451 TOB2Q14106 344 aaPredicted RBP23.05■■□□□ 1.28
ANKRD28-201ENST00000399451 KRT33BQ14525 404 aa23.05■■□□□ 1.28
ANKRD28-201ENST00000399451 DIS3Q9Y2L1 958 aaKnown RBP23.05■■□□□ 1.28
ANKRD28-201ENST00000399451 NFX1Q12986 1120 aaKnown RBP23.05■■□□□ 1.28
ANKRD28-201ENST00000399451 RASGRF1Q13972 1273 aa23.05■■□□□ 1.28
ANKRD28-201ENST00000399451 C6orf118Q5T5N4 469 aa23.05■■□□□ 1.28
ANKRD28-201ENST00000399451 RNF207Q6ZRF8 634 aa23.05■■□□□ 1.28
ANKRD28-201ENST00000399451 TOGARAM2Q6ZUX3 1019 aa23.05■■□□□ 1.28
ANKRD28-201ENST00000399451 TBRG4Q969Z0 631 aaKnown RBP eCLIP23.05■■□□□ 1.283e-6■■■■■ 46.7
ANKRD28-201ENST00000399451 ABCF3Q9NUQ8 709 aa23.05■■□□□ 1.28
ANKRD28-201ENST00000399451 ZBTB7AO95365 584 aa23.05■■□□□ 1.28
ANKRD28-201ENST00000399451 PLEKHA8P1O95397 391 aa23.05■■□□□ 1.28
ANKRD28-201ENST00000399451 E2F5Q15329 346 aa23.05■■□□□ 1.28
ANKRD28-201ENST00000399451 RC3H1Q5TC82 1133 aaKnown RBP23.05■■□□□ 1.28
ANKRD28-201ENST00000399451 EMBQ6PCB8 327 aa23.05■■□□□ 1.28
ANKRD28-201ENST00000399451 CASP2P42575 452 aa23.04■■□□□ 1.28
ANKRD28-201ENST00000399451 ADCY2Q08462 1091 aa23.04■■□□□ 1.28
ANKRD28-201ENST00000399451 ZNF335Q9H4Z2 1342 aaPredicted RBP23.04■■□□□ 1.28
ANKRD28-201ENST00000399451 EPHB1P54762 984 aa23.04■■□□□ 1.28
ANKRD28-201ENST00000399451 PIGBQ92521 554 aa23.04■■□□□ 1.28
ANKRD28-201ENST00000399451 CFAP36Q96G28 342 aa23.04■■□□□ 1.28
ANKRD28-201ENST00000399451 SPECC1L-ADORA2AF8WAN1 911 aa23.04■■□□□ 1.28
ANKRD28-201ENST00000399451 HOXA13P31271 388 aaPredicted RBP23.04■■□□□ 1.28
ANKRD28-201ENST00000399451 PLS3P13797 630 aa23.04■■□□□ 1.28
ANKRD28-201ENST00000399451 ELMOD1Q8N336 334 aa23.04■■□□□ 1.28
ANKRD28-201ENST00000399451 PEX19P40855 299 aa23.04■■□□□ 1.28
ANKRD28-201ENST00000399451 DNAAF3Q8N9W5 541 aa23.04■■□□□ 1.28
ANKRD28-201ENST00000399451 NT5C2P49902 561 aa23.03■■□□□ 1.28
ANKRD28-201ENST00000399451 KPNA2P52292 529 aaKnown RBP23.03■■□□□ 1.28
ANKRD28-201ENST00000399451 CALN1Q9BXU9 219 aa23.03■■□□□ 1.28
ANKRD28-201ENST00000399451 GNAT1P11488 350 aa23.03■■□□□ 1.28
ANKRD28-201ENST00000399451 OR6B2Q6IFH4 312 aa23.03■■□□□ 1.28
ANKRD28-201ENST00000399451 HEXIM2Q96MH2 286 aaKnown RBP23.03■■□□□ 1.28
ANKRD28-201ENST00000399451 RNF181Q9P0P0 153 aa23.03■■□□□ 1.28
ANKRD28-201ENST00000399451 ANKARQ7Z5J8 1434 aa23.03■■□□□ 1.28
ANKRD28-201ENST00000399451 SCARA5Q6ZMJ2 495 aa23.03■■□□□ 1.28
ANKRD28-201ENST00000399451 BPIFA3Q9BQP9 254 aa23.03■■□□□ 1.28
ANKRD28-201ENST00000399451 NFU1Q9UMS0 254 aa23.03■■□□□ 1.28
ANKRD28-201ENST00000399451 PNMA6AP0CW24 399 aaPredicted RBP23.03■■□□□ 1.28
ANKRD28-201ENST00000399451 LLGL1Q15334 1064 aa23.03■■□□□ 1.28
ANKRD28-201ENST00000399451 RHOT2Q8IXI1 618 aa23.03■■□□□ 1.28
ANKRD28-201ENST00000399451 TOM1L1O75674 476 aa23.03■■□□□ 1.28
ANKRD28-201ENST00000399451 GLE1Q53GS7 698 aaKnown RBP23.03■■□□□ 1.28
ANKRD28-201ENST00000399451 ARMCX2Q7L311 632 aa23.03■■□□□ 1.28
ANKRD28-201ENST00000399451 LRRC43Q8N309 656 aa23.03■■□□□ 1.28
ANKRD28-201ENST00000399451 FBXO41Q8TF61 875 aa23.03■■□□□ 1.28
ANKRD28-201ENST00000399451 AFF2P51816 1311 aa23.02■■□□□ 1.28
ANKRD28-201ENST00000399451 CD58P19256 250 aa23.02■■□□□ 1.28
ANKRD28-201ENST00000399451 CDK8P49336 464 aa23.02■■□□□ 1.28
ANKRD28-201ENST00000399451 STK36Q9NRP7 1315 aa23.02■■□□□ 1.28
ANKRD28-201ENST00000399451 TTI1O43156 1089 aa23.02■■□□□ 1.28
ANKRD28-201ENST00000399451 PRPSAP2O60256 369 aa23.02■■□□□ 1.28
ANKRD28-201ENST00000399451 RWDD2BP57060 319 aa23.02■■□□□ 1.28
ANKRD28-201ENST00000399451 TLK1Q9UKI8 766 aa23.02■■□□□ 1.28
ANKRD28-201ENST00000399451 SAMD9LQ8IVG5 1584 aa23.02■■□□□ 1.28
ANKRD28-201ENST00000399451 SUSD4Q5VX71 490 aa23.02■■□□□ 1.28
ANKRD28-201ENST00000399451 FOXP4Q8IVH2 680 aaPredicted RBP23.02■■□□□ 1.28
ANKRD28-201ENST00000399451 ZNF579Q8NAF0 562 aaKnown RBP23.02■■□□□ 1.28
ANKRD28-201ENST00000399451 DEPDC1BQ8WUY9 529 aa23.02■■□□□ 1.28
ANKRD28-201ENST00000399451 BRIP1Q9BX63 1249 aa23.02■■□□□ 1.28
ANKRD28-201ENST00000399451 ALKBH5Q6P6C2 394 aaKnown RBP23.02■■□□□ 1.28
ANKRD28-201ENST00000399451 THOC5Q13769 683 aaKnown RBP23.01■■□□□ 1.27
ANKRD28-201ENST00000399451 CATSPER4Q7RTX7 472 aa23.01■■□□□ 1.27
ANKRD28-201ENST00000399451 MBD5Q9P267 1494 aa23.01■■□□□ 1.27
ANKRD28-201ENST00000399451 CTTNQ14247 550 aaKnown RBP23.01■■□□□ 1.27
ANKRD28-201ENST00000399451 UNC13DQ70J99 1090 aa23.01■■□□□ 1.27
ANKRD28-201ENST00000399451 ABHD10Q9NUJ1 306 aa23.01■■□□□ 1.27
ANKRD28-201ENST00000399451 ARHGAP31Q2M1Z3 1444 aa23.01■■□□□ 1.27
ANKRD28-201ENST00000399451 PLAAQ9Y263 795 aa23.01■■□□□ 1.27
ANKRD28-201ENST00000399451 HOXD10P28358 340 aa23.01■■□□□ 1.27
ANKRD28-201ENST00000399451 SURF1Q15526 300 aa23.01■■□□□ 1.27
ANKRD28-201ENST00000399451 BSDC1Q9NW68 430 aaPredicted RBP23.01■■□□□ 1.27
ANKRD28-201ENST00000399451 CEP72Q9P209 647 aa23.01■■□□□ 1.27
ANKRD28-201ENST00000399451 INPP5FQ9Y2H2 1132 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms