RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 Q7L0L9 218 aa15.9■□□□□ 0.14
HLA-DQB1-202ENST00000399079 MIER3Q7Z3K6 550 aa15.9■□□□□ 0.14
HLA-DQB1-202ENST00000399079 CKAP2LQ8IYA6 745 aa15.9■□□□□ 0.14
HLA-DQB1-202ENST00000399079 ATP8B4Q8TF62 1192 aa15.9■□□□□ 0.14
HLA-DQB1-202ENST00000399079 DNAJB3Q8WWF6 145 aa15.9■□□□□ 0.14
HLA-DQB1-202ENST00000399079 ZBTB42B2RXF5 422 aa15.89■□□□□ 0.13
HLA-DQB1-202ENST00000399079 ZNF862O60290 1169 aa15.89■□□□□ 0.13
HLA-DQB1-202ENST00000399079 HBP1O60381 514 aa15.89■□□□□ 0.13
HLA-DQB1-202ENST00000399079 ATP2B1P20020 1258 aa15.89■□□□□ 0.13
HLA-DQB1-202ENST00000399079 MCM2P49736 904 aa15.89■□□□□ 0.13
HLA-DQB1-202ENST00000399079 JAK3P52333 1124 aa15.89■□□□□ 0.13
HLA-DQB1-202ENST00000399079 TAF2Q6P1X5 1199 aa15.89■□□□□ 0.13
HLA-DQB1-202ENST00000399079 FAM49AQ9H0Q0 323 aaPredicted RBP15.89■□□□□ 0.13
HLA-DQB1-202ENST00000399079 IGSF9BQ9UPX0 1349 aa15.89■□□□□ 0.13
HLA-DQB1-202ENST00000399079 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.89■□□□□ 0.13
HLA-DQB1-202ENST00000399079 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.89■□□□□ 0.13
HLA-DQB1-202ENST00000399079 KIF28PB7ZC32 967 aa15.89■□□□□ 0.13
HLA-DQB1-202ENST00000399079 EML1O00423 815 aa15.89■□□□□ 0.13
HLA-DQB1-202ENST00000399079 CXCL10P02778 98 aa15.89■□□□□ 0.13
HLA-DQB1-202ENST00000399079 SFNP31947 248 aa15.89■□□□□ 0.13
HLA-DQB1-202ENST00000399079 SMAD3P84022 425 aaKnown RBP15.89■□□□□ 0.13
HLA-DQB1-202ENST00000399079 TNPO1Q92973 898 aaKnown RBP15.89■□□□□ 0.13
HLA-DQB1-202ENST00000399079 FAM20AQ96MK3 541 aa15.89■□□□□ 0.13
HLA-DQB1-202ENST00000399079 NAP1L4Q99733 375 aaKnown RBP15.89■□□□□ 0.13
HLA-DQB1-202ENST00000399079 VAV3Q9UKW4 847 aa15.89■□□□□ 0.13
HLA-DQB1-202ENST00000399079 MARCH6O60337 910 aa15.88■□□□□ 0.13
HLA-DQB1-202ENST00000399079 PARNO95453 639 aaKnown RBP15.88■□□□□ 0.13
HLA-DQB1-202ENST00000399079 CHRNA1P02708 482 aa15.88■□□□□ 0.13
HLA-DQB1-202ENST00000399079 KLRC1P26715 233 aa15.88■□□□□ 0.13
HLA-DQB1-202ENST00000399079 GJB2P29033 226 aa15.88■□□□□ 0.13
HLA-DQB1-202ENST00000399079 PBX2P40425 430 aa15.88■□□□□ 0.13
HLA-DQB1-202ENST00000399079 MTHFD1LQ6UB35 978 aa15.88■□□□□ 0.13
HLA-DQB1-202ENST00000399079 BBXQ8WY36 941 aaPredicted RBP15.88■□□□□ 0.13
HLA-DQB1-202ENST00000399079 MTIF3Q9H2K0 278 aaKnown RBP15.88■□□□□ 0.13
HLA-DQB1-202ENST00000399079 FOXP1Q9H334 677 aaPredicted RBP15.88■□□□□ 0.13
HLA-DQB1-202ENST00000399079 SLC4A7Q9Y6M7 1214 aa15.88■□□□□ 0.13
HLA-DQB1-202ENST00000399079 TBX3O15119 743 aa15.87■□□□□ 0.13
HLA-DQB1-202ENST00000399079 CAND2O75155 1236 aa15.87■□□□□ 0.13
HLA-DQB1-202ENST00000399079 ACTN1P12814 892 aa15.87■□□□□ 0.13
HLA-DQB1-202ENST00000399079 PRKCEQ02156 737 aa15.87■□□□□ 0.13
HLA-DQB1-202ENST00000399079 TMEM62Q0P6H9 643 aa15.87■□□□□ 0.13
HLA-DQB1-202ENST00000399079 PPP2R5CQ13362 524 aa15.87■□□□□ 0.13
HLA-DQB1-202ENST00000399079 GNL2Q13823 731 aaKnown RBP15.87■□□□□ 0.13
HLA-DQB1-202ENST00000399079 GPR153Q6NV75 609 aa15.87■□□□□ 0.13
HLA-DQB1-202ENST00000399079 RPAINQ86UA6 219 aa15.87■□□□□ 0.13
HLA-DQB1-202ENST00000399079 NOSTRINQ8IVI9 506 aa15.87■□□□□ 0.13
HLA-DQB1-202ENST00000399079 DEFB123Q8N688 67 aa15.87■□□□□ 0.13
HLA-DQB1-202ENST00000399079 BANK1Q8NDB2 785 aa15.87■□□□□ 0.13
HLA-DQB1-202ENST00000399079 DBF4BQ8NFT6 615 aa15.87■□□□□ 0.13
HLA-DQB1-202ENST00000399079 FAM161BQ96MY7 647 aa15.87■□□□□ 0.13
HLA-DQB1-202ENST00000399079 PBX4Q9BYU1 374 aa15.87■□□□□ 0.13
HLA-DQB1-202ENST00000399079 PCDHA2Q9Y5H9 948 aa15.87■□□□□ 0.13
HLA-DQB1-202ENST00000399079 COL6A3P12111 3177 aa15.86■□□□□ 0.13
HLA-DQB1-202ENST00000399079 TMEM150BA6NC51 233 aa15.86■□□□□ 0.13
HLA-DQB1-202ENST00000399079 NEMFO60524 1076 aa15.86■□□□□ 0.13
HLA-DQB1-202ENST00000399079 OATP04181 439 aa15.86■□□□□ 0.13
HLA-DQB1-202ENST00000399079 MCM7P33993 719 aa15.86■□□□□ 0.13
HLA-DQB1-202ENST00000399079 SPIRE1Q08AE8 756 aa15.86■□□□□ 0.13
HLA-DQB1-202ENST00000399079 CALCRLQ16602 461 aa15.86■□□□□ 0.13
HLA-DQB1-202ENST00000399079 ZNF484Q5JVG2 852 aa15.86■□□□□ 0.13
HLA-DQB1-202ENST00000399079 FAM26DQ5JW98 314 aa15.86■□□□□ 0.13
HLA-DQB1-202ENST00000399079 CNKSR3Q6P9H4 555 aa15.86■□□□□ 0.13
HLA-DQB1-202ENST00000399079 RSPH3Q86UC2 560 aa15.86■□□□□ 0.13
HLA-DQB1-202ENST00000399079 RDM1Q8NG50 284 aa15.86■□□□□ 0.13
HLA-DQB1-202ENST00000399079 SH2D3AQ9BRG2 576 aa15.86■□□□□ 0.13
HLA-DQB1-202ENST00000399079 MYH9P35579 1960 aaKnown RBP15.86■□□□□ 0.13
HLA-DQB1-202ENST00000399079 COL1A2P08123 1366 aa15.85■□□□□ 0.13
HLA-DQB1-202ENST00000399079 BAG4O95429 457 aaKnown RBP15.85■□□□□ 0.13
HLA-DQB1-202ENST00000399079 SLC34A2O95436 690 aa15.85■□□□□ 0.13
HLA-DQB1-202ENST00000399079 C22orf31O95567 290 aa15.85■□□□□ 0.13
HLA-DQB1-202ENST00000399079 ATP2A2P16615 1042 aaKnown RBP15.85■□□□□ 0.13
HLA-DQB1-202ENST00000399079 DNAJB2P25686 324 aa15.85■□□□□ 0.13
HLA-DQB1-202ENST00000399079 U2AF2P26368 475 aaKnown RBP eCLIP15.85■□□□□ 0.13
HLA-DQB1-202ENST00000399079 RABGGTBP53611 331 aa15.85■□□□□ 0.13
HLA-DQB1-202ENST00000399079 MGAT3Q09327 533 aa15.85■□□□□ 0.13
HLA-DQB1-202ENST00000399079 PLEKHG4Q58EX7 1191 aa15.85■□□□□ 0.13
HLA-DQB1-202ENST00000399079 TMCO2Q7Z6W1 182 aaPredicted RBP15.85■□□□□ 0.13
HLA-DQB1-202ENST00000399079 SLFN12Q8IYM2 578 aa15.85■□□□□ 0.13
HLA-DQB1-202ENST00000399079 TMEM60Q9H2L4 133 aa15.85■□□□□ 0.13
HLA-DQB1-202ENST00000399079 SMC3Q9UQE7 1217 aa15.85■□□□□ 0.13
HLA-DQB1-202ENST00000399079 KIF3AQ9Y496 699 aa15.85■□□□□ 0.13
HLA-DQB1-202ENST00000399079 CDY2AQ9Y6F7 541 aa15.85■□□□□ 0.13
HLA-DQB1-202ENST00000399079 CHD9Q3L8U1 2897 aa15.85■□□□□ 0.13
HLA-DQB1-202ENST00000399079 EYSQ5T1H1 3165 aa15.85■□□□□ 0.13
HLA-DQB1-202ENST00000399079 SMIM35A0A1B0GVV1 85 aa15.84■□□□□ 0.13
HLA-DQB1-202ENST00000399079 STBD1O95210 358 aa15.84■□□□□ 0.13
HLA-DQB1-202ENST00000399079 GHRP10912 638 aa15.84■□□□□ 0.13
HLA-DQB1-202ENST00000399079 TXKP42681 527 aa15.84■□□□□ 0.13
HLA-DQB1-202ENST00000399079 WDR5P61964 334 aaKnown RBP15.84■□□□□ 0.13
HLA-DQB1-202ENST00000399079 MRPS6P82932 125 aaKnown RBP15.84■□□□□ 0.13
HLA-DQB1-202ENST00000399079 NBR1Q14596 966 aa15.84■□□□□ 0.13
HLA-DQB1-202ENST00000399079 ZNF174Q15697 407 aa15.84■□□□□ 0.13
HLA-DQB1-202ENST00000399079 NCAPH2Q6IBW4 605 aa15.84■□□□□ 0.13
HLA-DQB1-202ENST00000399079 KIAA0319LQ8IZA0 1049 aa15.84■□□□□ 0.13
HLA-DQB1-202ENST00000399079 METTL13Q8N6R0 699 aa15.84■□□□□ 0.13
HLA-DQB1-202ENST00000399079 FAM167AQ96KS9 214 aa15.84■□□□□ 0.13
HLA-DQB1-202ENST00000399079 MTMR9Q96QG7 549 aa15.84■□□□□ 0.13
HLA-DQB1-202ENST00000399079 TTYH1Q9H313 450 aaPredicted RBP15.84■□□□□ 0.13
HLA-DQB1-202ENST00000399079 TTC12Q9H892 705 aaPredicted RBP15.84■□□□□ 0.13
HLA-DQB1-202ENST00000399079 NRBP2Q9NSY0 501 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms