RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 RNF40O75150 1001 aa15.41■□□□□ 0.06
PCDHGA11-201ENST00000398587 TRIM50Q86XT4 487 aa15.41■□□□□ 0.06
PCDHGA11-201ENST00000398587 NSMCE1Q8WV22 266 aa15.41■□□□□ 0.06
PCDHGA11-201ENST00000398587 ADGRG1Q9Y653 693 aa15.41■□□□□ 0.06
PCDHGA11-201ENST00000398587 GPR75-ASB3A0A0A6YYF3 556 aa15.41■□□□□ 0.06
PCDHGA11-201ENST00000398587 TTC26A0AVF1 554 aa15.41■□□□□ 0.06
PCDHGA11-201ENST00000398587 GOLGA8IPA6NC78 632 aa15.41■□□□□ 0.06
PCDHGA11-201ENST00000398587 GOLGA8JA6NMD2 632 aa15.41■□□□□ 0.06
PCDHGA11-201ENST00000398587 IPO5O00410 1097 aaKnown RBP15.41■□□□□ 0.06
PCDHGA11-201ENST00000398587 ZMYND10O75800 440 aa15.41■□□□□ 0.06
PCDHGA11-201ENST00000398587 PPP4CP60510 307 aa15.41■□□□□ 0.06
PCDHGA11-201ENST00000398587 SLC10A5Q5PT55 438 aa15.41■□□□□ 0.06
PCDHGA11-201ENST00000398587 TTBK2Q6IQ55 1244 aa15.41■□□□□ 0.06
PCDHGA11-201ENST00000398587 RHOT2Q8IXI1 618 aa15.41■□□□□ 0.06
PCDHGA11-201ENST00000398587 MED10Q9BTT4 135 aa15.41■□□□□ 0.06
PCDHGA11-201ENST00000398587 PXDNQ92626 1479 aa15.41■□□□□ 0.06
PCDHGA11-201ENST00000398587 ANO9A1A5B4 782 aa15.41■□□□□ 0.06
PCDHGA11-201ENST00000398587 PALM3A6NDB9 673 aaPredicted RBP15.41■□□□□ 0.06
PCDHGA11-201ENST00000398587 ENTPD3O75355 529 aa15.41■□□□□ 0.06
PCDHGA11-201ENST00000398587 SFNP31947 248 aa15.41■□□□□ 0.06
PCDHGA11-201ENST00000398587 QARSP47897 775 aaKnown RBP15.41■□□□□ 0.06
PCDHGA11-201ENST00000398587 ATP1A2P50993 1020 aa15.41■□□□□ 0.06
PCDHGA11-201ENST00000398587 STXBP2Q15833 593 aa15.41■□□□□ 0.06
PCDHGA11-201ENST00000398587 ANKRD42Q8N9B4 389 aa15.41■□□□□ 0.06
PCDHGA11-201ENST00000398587 DNAJC12Q9UKB3 198 aa15.41■□□□□ 0.06
PCDHGA11-201ENST00000398587 LDHAP00338 332 aaKnown RBP15.4■□□□□ 0.06
PCDHGA11-201ENST00000398587 CLCN6P51797 869 aa15.4■□□□□ 0.06
PCDHGA11-201ENST00000398587 C2orf54Q08AI8 447 aa15.4■□□□□ 0.06
PCDHGA11-201ENST00000398587 SNRNP48Q6IEG0 339 aaKnown RBP15.4■□□□□ 0.06
PCDHGA11-201ENST00000398587 PDZD4Q76G19 769 aaPredicted RBP15.4■□□□□ 0.06
PCDHGA11-201ENST00000398587 CNTNAP5Q8WYK1 1306 aa15.4■□□□□ 0.06
PCDHGA11-201ENST00000398587 LRRC53A6NM62 1247 aa15.4■□□□□ 0.06
PCDHGA11-201ENST00000398587 MAP7D1Q3KQU3 841 aa15.4■□□□□ 0.06
PCDHGA11-201ENST00000398587 KAZNQ674X7 775 aa15.4■□□□□ 0.06
PCDHGA11-201ENST00000398587 EDEM3Q9BZQ6 932 aa15.4■□□□□ 0.06
PCDHGA11-201ENST00000398587 SMARCA1P28370 1054 aa15.4■□□□□ 0.06
PCDHGA11-201ENST00000398587 MRPS9P82933 396 aaKnown RBP15.4■□□□□ 0.06
PCDHGA11-201ENST00000398587 TROAPQ12815 778 aa15.4■□□□□ 0.06
PCDHGA11-201ENST00000398587 BANK1Q8NDB2 785 aa15.4■□□□□ 0.06
PCDHGA11-201ENST00000398587 NACA2Q9H009 215 aa15.4■□□□□ 0.06
PCDHGA11-201ENST00000398587 KIAA1586Q9HCI6 787 aa15.4■□□□□ 0.06
PCDHGA11-201ENST00000398587 FGFR2P21802 821 aa15.4■□□□□ 0.06
PCDHGA11-201ENST00000398587 BCAS4Q8TDM0 211 aa15.4■□□□□ 0.06
PCDHGA11-201ENST00000398587 ATP2A3Q93084 1043 aa15.4■□□□□ 0.06
PCDHGA11-201ENST00000398587 I3L4J1 428 aa15.39■□□□□ 0.05
PCDHGA11-201ENST00000398587 CHRNA5P30532 468 aa15.39■□□□□ 0.05
PCDHGA11-201ENST00000398587 CDC42EP5Q6NZY7 148 aa15.39■□□□□ 0.05
PCDHGA11-201ENST00000398587 IFT122Q9HBG6 1241 aa15.39■□□□□ 0.05
PCDHGA11-201ENST00000398587 CNGA1P29973 690 aa15.39■□□□□ 0.05
PCDHGA11-201ENST00000398587 CASP7P55210 303 aa15.39■□□□□ 0.05
PCDHGA11-201ENST00000398587 PPP2R5DQ14738 602 aa15.39■□□□□ 0.05
PCDHGA11-201ENST00000398587 CEP55Q53EZ4 464 aa15.39■□□□□ 0.05
PCDHGA11-201ENST00000398587 SGO2Q562F6 1265 aa15.39■□□□□ 0.05
PCDHGA11-201ENST00000398587 UHMK1Q8TAS1 419 aaKnown RBP15.39■□□□□ 0.05
PCDHGA11-201ENST00000398587 CCDC110Q8TBZ0 833 aa15.39■□□□□ 0.05
PCDHGA11-201ENST00000398587 FAM167AQ96KS9 214 aa15.39■□□□□ 0.05
PCDHGA11-201ENST00000398587 MSTO1Q9BUK6 570 aa15.39■□□□□ 0.05
PCDHGA11-201ENST00000398587 SERPINA10Q9UK55 444 aa15.39■□□□□ 0.05
PCDHGA11-201ENST00000398587 NDUFB10O96000 172 aa15.39■□□□□ 0.05
PCDHGA11-201ENST00000398587 STAT3P40763 770 aa15.39■□□□□ 0.05
PCDHGA11-201ENST00000398587 DNAJC24Q6P3W2 148 aa15.39■□□□□ 0.05
PCDHGA11-201ENST00000398587 APOBEC3FQ8IUX4 373 aaKnown RBP15.39■□□□□ 0.05
PCDHGA11-201ENST00000398587 MGARPQ8TDB4 240 aa15.39■□□□□ 0.05
PCDHGA11-201ENST00000398587 AP5M1Q9H0R1 490 aa15.39■□□□□ 0.05
PCDHGA11-201ENST00000398587 ATP6V0A4Q9HBG4 840 aa15.39■□□□□ 0.05
PCDHGA11-201ENST00000398587 NXF1Q9UBU9 619 aaKnown RBP15.39■□□□□ 0.05
PCDHGA11-201ENST00000398587 LIMA1Q9UHB6 759 aaKnown RBP15.39■□□□□ 0.05
PCDHGA11-201ENST00000398587 PNMA3Q9UL41 463 aa15.39■□□□□ 0.05
PCDHGA11-201ENST00000398587 PDHBP11177 359 aa15.39■□□□□ 0.05
PCDHGA11-201ENST00000398587 FCER1AP12319 257 aa15.39■□□□□ 0.05
PCDHGA11-201ENST00000398587 HSPA1LP34931 641 aa15.39■□□□□ 0.05
PCDHGA11-201ENST00000398587 EPHA7Q15375 998 aa15.39■□□□□ 0.05
PCDHGA11-201ENST00000398587 BSPRYQ5W0U4 402 aa15.39■□□□□ 0.05
PCDHGA11-201ENST00000398587 USP49Q70CQ1 688 aa15.39■□□□□ 0.05
PCDHGA11-201ENST00000398587 SESTD1Q86VW0 696 aa15.39■□□□□ 0.05
PCDHGA11-201ENST00000398587 LDHDQ86WU2 507 aa15.39■□□□□ 0.05
PCDHGA11-201ENST00000398587 MED7O43513 233 aa15.38■□□□□ 0.05
PCDHGA11-201ENST00000398587 DPYDQ12882 1025 aa15.38■□□□□ 0.05
PCDHGA11-201ENST00000398587 FBXO38Q6PIJ6 1188 aa15.38■□□□□ 0.05
PCDHGA11-201ENST00000398587 ADSSL1Q8N142 457 aa15.38■□□□□ 0.05
PCDHGA11-201ENST00000398587 GIMAP8Q8ND71 665 aaPredicted RBP15.38■□□□□ 0.05
PCDHGA11-201ENST00000398587 RPS6KC1Q96S38 1066 aa15.38■□□□□ 0.05
PCDHGA11-201ENST00000398587 EIF2AK1Q9BQI3 630 aaKnown RBP15.38■□□□□ 0.05
PCDHGA11-201ENST00000398587 HAUS2Q9NVX0 235 aa15.38■□□□□ 0.05
PCDHGA11-201ENST00000398587 ZNRF3Q9ULT6 936 aa15.38■□□□□ 0.05
PCDHGA11-201ENST00000398587 EIF3CLB5ME19 914 aaKnown RBP15.38■□□□□ 0.05
PCDHGA11-201ENST00000398587 CCDC188H7C350 402 aa15.38■□□□□ 0.05
PCDHGA11-201ENST00000398587 STXBP3O00186 592 aa15.38■□□□□ 0.05
PCDHGA11-201ENST00000398587 CACNA2D3Q8IZS8 1091 aa15.38■□□□□ 0.05
PCDHGA11-201ENST00000398587 ENGASEQ8NFI3 743 aa15.38■□□□□ 0.05
PCDHGA11-201ENST00000398587 RAB3IL1Q8TBN0 382 aa15.38■□□□□ 0.05
PCDHGA11-201ENST00000398587 TCP11Q8WWU5 503 aa15.38■□□□□ 0.05
PCDHGA11-201ENST00000398587 DPF2Q92785 391 aa15.38■□□□□ 0.05
PCDHGA11-201ENST00000398587 EIF3CQ99613 913 aaKnown RBP15.38■□□□□ 0.05
PCDHGA11-201ENST00000398587 APOL6Q9BWW8 343 aa15.38■□□□□ 0.05
PCDHGA11-201ENST00000398587 TTLL3Q9Y4R7 772 aa15.38■□□□□ 0.05
PCDHGA11-201ENST00000398587 ECEL1O95672 775 aa15.38■□□□□ 0.05
PCDHGA11-201ENST00000398587 KCNJ6P48051 423 aa15.38■□□□□ 0.05
PCDHGA11-201ENST00000398587 CCDC13Q8IYE1 715 aa15.38■□□□□ 0.05
PCDHGA11-201ENST00000398587 RNF10Q8N5U6 811 aaKnown RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms