RNA–Protein interactions for RNA: ENST00000398519.9

CSNK1D-204, Transcript of casein kinase 1 delta, humanhuman

TSL 5 BASIC

Gene CSNK1D, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-204ENST00000398519 STK38Q15208 465 aa19.47■□□□□ 0.71
CSNK1D-204ENST00000398519 TRMT1LQ7Z2T5 733 aaKnown RBP19.47■□□□□ 0.71
CSNK1D-204ENST00000398519 LMBR1Q8WVP7 490 aa19.47■□□□□ 0.71
CSNK1D-204ENST00000398519 BBXQ8WY36 941 aaPredicted RBP19.47■□□□□ 0.71
CSNK1D-204ENST00000398519 TOX2Q96NM4 488 aa19.47■□□□□ 0.71
CSNK1D-204ENST00000398519 CTAGE1Q96RT6 745 aa19.47■□□□□ 0.71
CSNK1D-204ENST00000398519 TRPV6Q9H1D0 765 aa19.47■□□□□ 0.71
CSNK1D-204ENST00000398519 SETD4Q9NVD3 440 aa19.47■□□□□ 0.71
CSNK1D-204ENST00000398519 CFAP45Q9UL16 551 aa19.47■□□□□ 0.71
CSNK1D-204ENST00000398519 MED24O75448 989 aa19.46■□□□□ 0.71
CSNK1D-204ENST00000398519 CD4P01730 458 aa19.46■□□□□ 0.71
CSNK1D-204ENST00000398519 INSRRP14616 1297 aa19.46■□□□□ 0.71
CSNK1D-204ENST00000398519 CDC25AP30304 524 aa19.46■□□□□ 0.71
CSNK1D-204ENST00000398519 ZNF200P98182 395 aaPredicted RBP19.46■□□□□ 0.71
CSNK1D-204ENST00000398519 CATSPER3Q86XQ3 398 aa19.46■□□□□ 0.71
CSNK1D-204ENST00000398519 TPH2Q8IWU9 490 aa19.46■□□□□ 0.71
CSNK1D-204ENST00000398519 ERMNQ8TAM6 284 aa19.46■□□□□ 0.71
CSNK1D-204ENST00000398519 FAM167AQ96KS9 214 aa19.46■□□□□ 0.71
CSNK1D-204ENST00000398519 ZSWIM4Q9H7M6 989 aa19.46■□□□□ 0.71
CSNK1D-204ENST00000398519 SRPRBQ9Y5M8 271 aaKnown RBP19.46■□□□□ 0.71
CSNK1D-204ENST00000398519 NRCAMQ92823 1304 aa19.46■□□□□ 0.71
CSNK1D-204ENST00000398519 C17orf102A2RUQ5 167 aa19.45■□□□□ 0.7
CSNK1D-204ENST00000398519 TMEM150BA6NC51 233 aa19.45■□□□□ 0.7
CSNK1D-204ENST00000398519 ZBTB42B2RXF5 422 aa19.45■□□□□ 0.7
CSNK1D-204ENST00000398519 SPTLC2O15270 562 aa19.45■□□□□ 0.7
CSNK1D-204ENST00000398519 HBP1O60381 514 aa19.45■□□□□ 0.7
CSNK1D-204ENST00000398519 ADAM17P78536 824 aa19.45■□□□□ 0.7
CSNK1D-204ENST00000398519 FAAP100Q0VG06 881 aa19.45■□□□□ 0.7
CSNK1D-204ENST00000398519 GRIK4Q16099 956 aa19.45■□□□□ 0.7
CSNK1D-204ENST00000398519 HAUS3Q68CZ6 603 aa19.45■□□□□ 0.7
CSNK1D-204ENST00000398519 C4orf19Q8IY42 314 aa19.45■□□□□ 0.7
CSNK1D-204ENST00000398519 MMTAG2Q9BU76 263 aaKnown RBP19.45■□□□□ 0.7
CSNK1D-204ENST00000398519 POLR3CQ9BUI4 534 aaPredicted RBP19.45■□□□□ 0.7
CSNK1D-204ENST00000398519 TUFT1Q9NNX1 390 aa19.45■□□□□ 0.7
CSNK1D-204ENST00000398519 DCDC2CA8MYV0 355 aa19.44■□□□□ 0.7
CSNK1D-204ENST00000398519 DKC1O60832 514 aaKnown RBP eCLIP19.44■□□□□ 0.7
CSNK1D-204ENST00000398519 RPA1P27694 616 aa19.44■□□□□ 0.7
CSNK1D-204ENST00000398519 LONP1P36776 959 aaKnown RBP19.44■□□□□ 0.7
CSNK1D-204ENST00000398519 IGBP1P78318 339 aa19.44■□□□□ 0.7
CSNK1D-204ENST00000398519 KRT85P78386 507 aa19.44■□□□□ 0.7
CSNK1D-204ENST00000398519 PTGISQ16647 500 aa19.44■□□□□ 0.7
CSNK1D-204ENST00000398519 XKR3Q5GH77 459 aa19.44■□□□□ 0.7
CSNK1D-204ENST00000398519 MARCH8Q5T0T0 291 aa19.44■□□□□ 0.7
CSNK1D-204ENST00000398519 ANO5Q75V66 913 aa19.44■□□□□ 0.7
CSNK1D-204ENST00000398519 SNX29Q8TEQ0 813 aa19.44■□□□□ 0.7
CSNK1D-204ENST00000398519 TRAPPC12Q8WVT3 735 aa19.44■□□□□ 0.7
CSNK1D-204ENST00000398519 TNPO1Q92973 898 aaKnown RBP19.44■□□□□ 0.7
CSNK1D-204ENST00000398519 AK8Q96MA6 479 aa19.44■□□□□ 0.7
CSNK1D-204ENST00000398519 CLIC6Q96NY7 704 aa19.44■□□□□ 0.7
CSNK1D-204ENST00000398519 CSRNP2Q9H175 543 aa19.44■□□□□ 0.7
CSNK1D-204ENST00000398519 CHMP5Q9NZZ3 219 aa19.44■□□□□ 0.7
CSNK1D-204ENST00000398519 SEPT9Q9UHD8 586 aaPredicted RBP19.44■□□□□ 0.7
CSNK1D-204ENST00000398519 TLR3O15455 904 aaKnown RBP19.44■□□□□ 0.7
CSNK1D-204ENST00000398519 TREHO43280 583 aa19.44■□□□□ 0.7
CSNK1D-204ENST00000398519 EVI5O60447 810 aa19.44■□□□□ 0.7
CSNK1D-204ENST00000398519 PPP6R2O75170 966 aa19.44■□□□□ 0.7
CSNK1D-204ENST00000398519 LYPLA2O95372 231 aa19.44■□□□□ 0.7
CSNK1D-204ENST00000398519 NCLP19338 710 aaKnown RBP19.44■□□□□ 0.7
CSNK1D-204ENST00000398519 CCT6AP40227 531 aaKnown RBP19.44■□□□□ 0.7
CSNK1D-204ENST00000398519 ECM1Q16610 540 aa19.44■□□□□ 0.7
CSNK1D-204ENST00000398519 C7orf61Q8IZ16 206 aa19.44■□□□□ 0.7
CSNK1D-204ENST00000398519 KRI1Q8N9T8 703 aaKnown RBP19.44■□□□□ 0.7
CSNK1D-204ENST00000398519 DPF3Q92784 378 aa19.44■□□□□ 0.7
CSNK1D-204ENST00000398519 NRBP2Q9NSY0 501 aa19.44■□□□□ 0.7
CSNK1D-204ENST00000398519 STK24Q9Y6E0 443 aa19.44■□□□□ 0.7
CSNK1D-204ENST00000398519 COL1A2P08123 1366 aa19.43■□□□□ 0.7
CSNK1D-204ENST00000398519 RRN3P2A6NIE6 340 aa19.43■□□□□ 0.7
CSNK1D-204ENST00000398519 ZBTB39O15060 712 aa19.43■□□□□ 0.7
CSNK1D-204ENST00000398519 CLTBP09497 229 aa19.43■□□□□ 0.7
CSNK1D-204ENST00000398519 GNAT1P11488 350 aa19.43■□□□□ 0.7
CSNK1D-204ENST00000398519 YWHABP31946 246 aaKnown RBP19.43■□□□□ 0.7
CSNK1D-204ENST00000398519 ZNF484Q5JVG2 852 aa19.43■□□□□ 0.7
CSNK1D-204ENST00000398519 KRT79Q5XKE5 535 aa19.43■□□□□ 0.7
CSNK1D-204ENST00000398519 POTEGQ6S5H5 508 aa19.43■□□□□ 0.7
CSNK1D-204ENST00000398519 KCNG4Q8TDN1 519 aa19.43■□□□□ 0.7
CSNK1D-204ENST00000398519 ZBTB10Q96DT7 871 aa19.43■□□□□ 0.7
CSNK1D-204ENST00000398519 NIFKQ9BYG3 293 aaKnown RBP19.43■□□□□ 0.7
CSNK1D-204ENST00000398519 PDLIM7Q9NR12 457 aa19.43■□□□□ 0.7
CSNK1D-204ENST00000398519 RCOR1Q9UKL0 485 aa19.43■□□□□ 0.7
CSNK1D-204ENST00000398519 NOD1Q9Y239 953 aa19.43■□□□□ 0.7
CSNK1D-204ENST00000398519 MBLAC1A4D2B0 266 aaPredicted RBP19.42■□□□□ 0.7
CSNK1D-204ENST00000398519 DDX11L8A8MPP1 907 aa19.42■□□□□ 0.7
CSNK1D-204ENST00000398519 CYP2C9P11712 490 aa19.42■□□□□ 0.7
CSNK1D-204ENST00000398519 TARBP2Q15633 366 aaKnown RBP19.42■□□□□ 0.7
CSNK1D-204ENST00000398519 SPECC1Q5M775 1068 aa19.42■□□□□ 0.7
CSNK1D-204ENST00000398519 PLA2G4FQ68DD2 849 aa19.42■□□□□ 0.7
CSNK1D-204ENST00000398519 SH3RF1Q7Z6J0 888 aa19.42■□□□□ 0.7
CSNK1D-204ENST00000398519 SH2D3AQ9BRG2 576 aa19.42■□□□□ 0.7
CSNK1D-204ENST00000398519 TUBE1Q9UJT0 475 aa19.42■□□□□ 0.7
CSNK1D-204ENST00000398519 TBX21Q9UL17 535 aa19.42■□□□□ 0.7
CSNK1D-204ENST00000398519 TRIP12Q14669 1992 aaPredicted RBP19.41■□□□□ 0.7
CSNK1D-204ENST00000398519 A0A087WWV3 80 aa19.41■□□□□ 0.7
CSNK1D-204ENST00000398519 SERINC5Q86VE9 423 aa19.41■□□□□ 0.7
CSNK1D-204ENST00000398519 LEO1Q8WVC0 666 aaPredicted RBP19.41■□□□□ 0.7
CSNK1D-204ENST00000398519 DHX38Q92620 1227 aaKnown RBP19.41■□□□□ 0.7
CSNK1D-204ENST00000398519 WNT8BQ93098 351 aa19.41■□□□□ 0.7
CSNK1D-204ENST00000398519 CEP89Q96ST8 783 aa19.41■□□□□ 0.7
CSNK1D-204ENST00000398519 MUTP22033 750 aa19.4■□□□□ 0.7
CSNK1D-204ENST00000398519 NPEPPSP55786 919 aa19.4■□□□□ 0.7
CSNK1D-204ENST00000398519 TCHHQ07283 1943 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms