RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 CAMK1Q14012 370 aa15.61■□□□□ 0.09
SEC13-205ENST00000397101 SMRP1Q8NCR6 262 aa15.61■□□□□ 0.09
SEC13-205ENST00000397101 GPKOWQ92917 476 aaPredicted RBP eCLIP15.61■□□□□ 0.099e-7■□□□□ 8.5
SEC13-205ENST00000397101 SENP7Q9BQF6 1050 aa15.61■□□□□ 0.09
SEC13-205ENST00000397101 IRF2BPLQ9H1B7 796 aa15.61■□□□□ 0.09
SEC13-205ENST00000397101 MYH6P13533 1939 aa15.6■□□□□ 0.09
SEC13-205ENST00000397101 CCDC196A0A1B0GTZ2 297 aa15.6■□□□□ 0.09
SEC13-205ENST00000397101 SPATA31C2B4DYI2 1134 aa15.6■□□□□ 0.09
SEC13-205ENST00000397101 KLRF2D3W0D1 207 aa15.6■□□□□ 0.09
SEC13-205ENST00000397101 ENPP3O14638 875 aa15.6■□□□□ 0.09
SEC13-205ENST00000397101 SORBS3O60504 671 aa15.6■□□□□ 0.09
SEC13-205ENST00000397101 DGKIO75912 1065 aa15.6■□□□□ 0.09
SEC13-205ENST00000397101 HOXA13P31271 388 aaPredicted RBP15.6■□□□□ 0.09
SEC13-205ENST00000397101 EVCP57679 992 aa15.6■□□□□ 0.09
SEC13-205ENST00000397101 MGAT3Q09327 533 aa15.6■□□□□ 0.09
SEC13-205ENST00000397101 BTG3Q14201 252 aaPredicted RBP15.6■□□□□ 0.09
SEC13-205ENST00000397101 CLUL1Q15846 466 aa15.6■□□□□ 0.09
SEC13-205ENST00000397101 SUGP1Q8IWZ8 645 aaKnown RBP15.6■□□□□ 0.09
SEC13-205ENST00000397101 STAG2Q8N3U4 1231 aa15.6■□□□□ 0.09
SEC13-205ENST00000397101 EFHBQ8N7U6 833 aa15.6■□□□□ 0.09
SEC13-205ENST00000397101 FANCBQ8NB91 859 aa15.6■□□□□ 0.09
SEC13-205ENST00000397101 LMBR1Q8WVP7 490 aa15.6■□□□□ 0.09
SEC13-205ENST00000397101 PBXIP1Q96AQ6 731 aa15.6■□□□□ 0.09
SEC13-205ENST00000397101 NCOA5Q9HCD5 579 aaKnown RBP15.6■□□□□ 0.09
SEC13-205ENST00000397101 RBM28Q9NW13 759 aaKnown RBP15.6■□□□□ 0.09
SEC13-205ENST00000397101 PLAGL2Q9UPG8 496 aa15.6■□□□□ 0.09
SEC13-205ENST00000397101 ATG2AQ2TAZ0 1938 aa15.6■□□□□ 0.09
SEC13-205ENST00000397101 PALM3A6NDB9 673 aaPredicted RBP15.59■□□□□ 0.09
SEC13-205ENST00000397101 RBAK-RBAKDNI3L0D1 243 aa15.59■□□□□ 0.09
SEC13-205ENST00000397101 FIBPO43427 364 aa15.59■□□□□ 0.09
SEC13-205ENST00000397101 NDUFV1P49821 464 aa15.59■□□□□ 0.09
SEC13-205ENST00000397101 MRPS9P82933 396 aaKnown RBP15.59■□□□□ 0.09
SEC13-205ENST00000397101 ZXDAP98168 799 aa15.59■□□□□ 0.09
SEC13-205ENST00000397101 ARHGAP4P98171 946 aa15.59■□□□□ 0.09
SEC13-205ENST00000397101 SCRN1Q12765 414 aa15.59■□□□□ 0.09
SEC13-205ENST00000397101 TCF15Q12870 199 aa15.59■□□□□ 0.09
SEC13-205ENST00000397101 FAM43BQ6ZT52 329 aaPredicted RBP15.59■□□□□ 0.09
SEC13-205ENST00000397101 CYFIP1Q7L576 1253 aa15.59■□□□□ 0.09
SEC13-205ENST00000397101 RSPH3Q86UC2 560 aa15.59■□□□□ 0.09
SEC13-205ENST00000397101 GTF3C6Q969F1 213 aa15.59■□□□□ 0.09
SEC13-205ENST00000397101 IPO9Q96P70 1041 aaKnown RBP15.59■□□□□ 0.09
SEC13-205ENST00000397101 PHOX2BQ99453 314 aa15.59■□□□□ 0.09
SEC13-205ENST00000397101 RIOX1Q9H6W3 641 aa15.59■□□□□ 0.09
SEC13-205ENST00000397101 MAD2L2Q9UI95 211 aa15.59■□□□□ 0.09
SEC13-205ENST00000397101 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.59■□□□□ 0.09
SEC13-205ENST00000397101 SQORQ9Y6N5 450 aa15.59■□□□□ 0.09
SEC13-205ENST00000397101 TTC3P53804 2025 aa15.59■□□□□ 0.09
SEC13-205ENST00000397101 GHRP10912 638 aa15.58■□□□□ 0.08
SEC13-205ENST00000397101 GTF2F1P35269 517 aaKnown RBP eCLIP15.58■□□□□ 0.08
SEC13-205ENST00000397101 ADD1P35611 737 aaKnown RBP15.58■□□□□ 0.08
SEC13-205ENST00000397101 GNAQP50148 359 aa15.58■□□□□ 0.08
SEC13-205ENST00000397101 RCAN1P53805 252 aa15.58■□□□□ 0.08
SEC13-205ENST00000397101 TROAPQ12815 778 aa15.58■□□□□ 0.08
SEC13-205ENST00000397101 SEMA3FQ13275 785 aa15.58■□□□□ 0.08
SEC13-205ENST00000397101 LPIN1Q14693 890 aa15.58■□□□□ 0.08
SEC13-205ENST00000397101 GRM4Q14833 912 aa15.58■□□□□ 0.08
SEC13-205ENST00000397101 IER5LQ5T953 404 aa15.58■□□□□ 0.08
SEC13-205ENST00000397101 XRRA1Q6P2D8 792 aa15.58■□□□□ 0.08
SEC13-205ENST00000397101 CMTR2Q8IYT2 770 aaKnown RBP15.58■□□□□ 0.08
SEC13-205ENST00000397101 CRIPAKQ8N1N5 446 aa15.58■□□□□ 0.08
SEC13-205ENST00000397101 CCDC82Q8N4S0 544 aa15.58■□□□□ 0.08
SEC13-205ENST00000397101 FBXL6Q8N531 539 aa15.58■□□□□ 0.08
SEC13-205ENST00000397101 SPPL3Q8TCT6 385 aa15.58■□□□□ 0.08
SEC13-205ENST00000397101 IGFLR1Q9H665 355 aa15.58■□□□□ 0.08
SEC13-205ENST00000397101 BCAS3Q9H6U6 928 aa15.58■□□□□ 0.08
SEC13-205ENST00000397101 CLEC1BQ9P126 229 aa15.58■□□□□ 0.08
SEC13-205ENST00000397101 FSD2A1L4K1 749 aa15.57■□□□□ 0.08
SEC13-205ENST00000397101 MBLAC1A4D2B0 266 aaPredicted RBP15.57■□□□□ 0.08
SEC13-205ENST00000397101 LINC01565O15544 149 aa15.57■□□□□ 0.08
SEC13-205ENST00000397101 CDKL5O76039 1030 aa15.57■□□□□ 0.08
SEC13-205ENST00000397101 NUBP1P53384 320 aa15.57■□□□□ 0.08
SEC13-205ENST00000397101 FOXK2Q01167 660 aa15.57■□□□□ 0.08
SEC13-205ENST00000397101 AKAP17AQ02040 695 aaKnown RBP15.57■□□□□ 0.08
SEC13-205ENST00000397101 SIGLEC14Q08ET2 396 aa15.57■□□□□ 0.08
SEC13-205ENST00000397101 FBXO47Q5MNV8 452 aa15.57■□□□□ 0.08
SEC13-205ENST00000397101 TSHZ1Q6ZSZ6 1077 aa15.57■□□□□ 0.08
SEC13-205ENST00000397101 GIMAP8Q8ND71 665 aaPredicted RBP15.57■□□□□ 0.08
SEC13-205ENST00000397101 MAP3K14Q99558 947 aa15.57■□□□□ 0.08
SEC13-205ENST00000397101 PHF7Q9BWX1 381 aaPredicted RBP15.57■□□□□ 0.08
SEC13-205ENST00000397101 FTHL17Q9BXU8 183 aa15.57■□□□□ 0.08
SEC13-205ENST00000397101 ALG13Q9NP73 1137 aaKnown RBP15.57■□□□□ 0.08
SEC13-205ENST00000397101 SMC3Q9UQE7 1217 aa15.57■□□□□ 0.08
SEC13-205ENST00000397101 ATF7P17544 494 aaPredicted RBP15.56■□□□□ 0.08
SEC13-205ENST00000397101 CDC27P30260 824 aa15.56■□□□□ 0.08
SEC13-205ENST00000397101 FCHSD1Q86WN1 690 aa15.56■□□□□ 0.08
SEC13-205ENST00000397101 TRIM50Q86XT4 487 aa15.56■□□□□ 0.08
SEC13-205ENST00000397101 PNMA6FA0A0J9YX94 578 aa15.55■□□□□ 0.08
SEC13-205ENST00000397101 PPFIA3O75145 1194 aa15.55■□□□□ 0.08
SEC13-205ENST00000397101 ITGB1P05556 798 aa15.55■□□□□ 0.08
SEC13-205ENST00000397101 UBE3AQ05086 875 aa15.55■□□□□ 0.08
SEC13-205ENST00000397101 SSRP1Q08945 709 aaKnown RBP15.55■□□□□ 0.08
SEC13-205ENST00000397101 CUL4AQ13619 759 aa15.55■□□□□ 0.08
SEC13-205ENST00000397101 NPAS4Q8IUM7 802 aa15.55■□□□□ 0.08
SEC13-205ENST00000397101 TRIM22Q8IYM9 498 aa15.55■□□□□ 0.08
SEC13-205ENST00000397101 CMTR1Q8N1G2 835 aaKnown RBP15.55■□□□□ 0.08
SEC13-205ENST00000397101 FAM184AQ8NB25 1140 aa15.55■□□□□ 0.08
SEC13-205ENST00000397101 PIBF1Q8WXW3 757 aa15.55■□□□□ 0.08
SEC13-205ENST00000397101 LZTS2Q9BRK4 669 aa15.55■□□□□ 0.08
SEC13-205ENST00000397101 SLC26A6Q9BXS9 759 aa15.55■□□□□ 0.08
SEC13-205ENST00000397101 MRPL42Q9Y6G3 142 aaKnown RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms