RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 MAPK8IP1Q9UQF2 711 aa14.14□□□□□ -0.15
TRIM39-204ENST00000396548 MYH9P35579 1960 aaKnown RBP14.14□□□□□ -0.15
TRIM39-204ENST00000396548 RSPH10B2B2RC85 870 aa14.14□□□□□ -0.15
TRIM39-204ENST00000396548 SNAI1O95863 264 aaPredicted RBP14.14□□□□□ -0.15
TRIM39-204ENST00000396548 PSAPP07602 524 aa14.14□□□□□ -0.15
TRIM39-204ENST00000396548 RSPH10BP0C881 870 aa14.14□□□□□ -0.15
TRIM39-204ENST00000396548 PPP1R2P41236 205 aa14.14□□□□□ -0.15
TRIM39-204ENST00000396548 TMEM63BQ5T3F8 832 aa14.14□□□□□ -0.15
TRIM39-204ENST00000396548 WDR78Q5VTH9 848 aa14.14□□□□□ -0.15
TRIM39-204ENST00000396548 FBXO16Q8IX29 292 aaPredicted RBP14.14□□□□□ -0.15
TRIM39-204ENST00000396548 CCDC65Q8IXS2 484 aa14.14□□□□□ -0.15
TRIM39-204ENST00000396548 DAW1Q8N136 415 aa14.14□□□□□ -0.15
TRIM39-204ENST00000396548 GUF1Q8N442 669 aaKnown RBP14.14□□□□□ -0.15
TRIM39-204ENST00000396548 NPLOC4Q8TAT6 608 aa14.14□□□□□ -0.15
TRIM39-204ENST00000396548 CCDC47Q96A33 483 aaKnown RBP14.14□□□□□ -0.15
TRIM39-204ENST00000396548 MRFAP1L1Q96HT8 127 aa14.14□□□□□ -0.15
TRIM39-204ENST00000396548 MAML3Q96JK9 1138 aa14.14□□□□□ -0.15
TRIM39-204ENST00000396548 BMP2KQ9NSY1 1161 aaPredicted RBP14.14□□□□□ -0.15
TRIM39-204ENST00000396548 ANKEF1Q9NU02 776 aa14.14□□□□□ -0.15
TRIM39-204ENST00000396548 SAMM50Q9Y512 469 aa14.14□□□□□ -0.15
TRIM39-204ENST00000396548 RASSF10A6NK89 507 aa14.13□□□□□ -0.15
TRIM39-204ENST00000396548 NEDD9Q14511 834 aa14.13□□□□□ -0.15
TRIM39-204ENST00000396548 KLHL10Q6JEL2 608 aa14.13□□□□□ -0.15
TRIM39-204ENST00000396548 IRF2BP1Q8IU81 584 aa14.13□□□□□ -0.15
TRIM39-204ENST00000396548 DOCK3Q8IZD9 2030 aa14.13□□□□□ -0.15
TRIM39-204ENST00000396548 PDGFCQ9NRA1 345 aa14.13□□□□□ -0.15
TRIM39-204ENST00000396548 THSD7BQ9C0I4 1608 aa14.13□□□□□ -0.15
TRIM39-204ENST00000396548 STX17P56962 302 aa14.13□□□□□ -0.15
TRIM39-204ENST00000396548 CRHR2Q13324 411 aa14.13□□□□□ -0.15
TRIM39-204ENST00000396548 CELF3Q5SZQ8 465 aaKnown RBP14.13□□□□□ -0.15
TRIM39-204ENST00000396548 METTL7BQ6UX53 244 aa14.13□□□□□ -0.15
TRIM39-204ENST00000396548 AFAP1L1Q8TED9 768 aa14.13□□□□□ -0.15
TRIM39-204ENST00000396548 CEP89Q96ST8 783 aa14.13□□□□□ -0.15
TRIM39-204ENST00000396548 PDLIM7Q9NR12 457 aa14.13□□□□□ -0.15
TRIM39-204ENST00000396548 GABBR1Q9UBS5 961 aa14.13□□□□□ -0.15
TRIM39-204ENST00000396548 TRIM49BA6NDI0 452 aa14.12□□□□□ -0.15
TRIM39-204ENST00000396548 CCNE1P24864 410 aa14.12□□□□□ -0.15
TRIM39-204ENST00000396548 CTGFP29279 349 aa14.12□□□□□ -0.15
TRIM39-204ENST00000396548 HOXD13P35453 343 aa14.12□□□□□ -0.15
TRIM39-204ENST00000396548 RAD51AP2Q09MP3 1159 aa14.12□□□□□ -0.15
TRIM39-204ENST00000396548 ZCWPW2Q504Y3 356 aa14.12□□□□□ -0.15
TRIM39-204ENST00000396548 CYP4F22Q6NT55 531 aa14.12□□□□□ -0.15
TRIM39-204ENST00000396548 SWSAP1Q6NVH7 229 aa14.12□□□□□ -0.15
TRIM39-204ENST00000396548 EEPD1Q7L9B9 569 aa14.12□□□□□ -0.15
TRIM39-204ENST00000396548 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.12□□□□□ -0.15
TRIM39-204ENST00000396548 ANP32BQ92688 251 aaKnown RBP14.12□□□□□ -0.15
TRIM39-204ENST00000396548 OLFML3Q9NRN5 406 aa14.12□□□□□ -0.15
TRIM39-204ENST00000396548 ODF2LQ9ULJ1 636 aa14.12□□□□□ -0.15
TRIM39-204ENST00000396548 TMEM150BA6NC51 233 aa14.12□□□□□ -0.15
TRIM39-204ENST00000396548 BACH1O14867 736 aa14.12□□□□□ -0.15
TRIM39-204ENST00000396548 HOXC6P09630 235 aa14.12□□□□□ -0.15
TRIM39-204ENST00000396548 IDEP14735 1019 aa14.12□□□□□ -0.15
TRIM39-204ENST00000396548 FANCCQ00597 558 aa14.12□□□□□ -0.15
TRIM39-204ENST00000396548 FAM26FQ5R3K3 315 aa14.12□□□□□ -0.15
TRIM39-204ENST00000396548 ANKRD40Q6AI12 368 aa14.12□□□□□ -0.15
TRIM39-204ENST00000396548 MIS18BP1Q6P0N0 1132 aa14.12□□□□□ -0.15
TRIM39-204ENST00000396548 SCFD1Q8WVM8 642 aa14.12□□□□□ -0.15
TRIM39-204ENST00000396548 P2RX5Q93086 422 aa14.12□□□□□ -0.15
TRIM39-204ENST00000396548 STRA6Q9BX79 667 aa14.12□□□□□ -0.15
TRIM39-204ENST00000396548 VTA1Q9NP79 307 aa14.12□□□□□ -0.15
TRIM39-204ENST00000396548 GJD2Q9UKL4 321 aa14.12□□□□□ -0.15
TRIM39-204ENST00000396548 CASP5P51878 434 aa14.12□□□□□ -0.15
TRIM39-204ENST00000396548 PADI6Q6TGC4 694 aa14.12□□□□□ -0.15
TRIM39-204ENST00000396548 MSL3Q8N5Y2 521 aaKnown RBP14.12□□□□□ -0.15
TRIM39-204ENST00000396548 GPR20Q99678 358 aa14.12□□□□□ -0.15
TRIM39-204ENST00000396548 ZFYVE28Q9HCC9 887 aa14.12□□□□□ -0.15
TRIM39-204ENST00000396548 INTS13Q9NVM9 706 aa14.12□□□□□ -0.15
TRIM39-204ENST00000396548 IVNS1ABPQ9Y6Y0 642 aa14.12□□□□□ -0.15
TRIM39-204ENST00000396548 CA12O43570 354 aa14.11□□□□□ -0.15
TRIM39-204ENST00000396548 SORBS3O60504 671 aa14.11□□□□□ -0.15
TRIM39-204ENST00000396548 LGR5O75473 907 aa14.11□□□□□ -0.15
TRIM39-204ENST00000396548 BMT2Q1RMZ1 405 aa14.11□□□□□ -0.15
TRIM39-204ENST00000396548 KCTD10Q9H3F6 313 aa14.11□□□□□ -0.15
TRIM39-204ENST00000396548 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.11□□□□□ -0.15
TRIM39-204ENST00000396548 LRRC10BA6NIK2 292 aa14.11□□□□□ -0.15
TRIM39-204ENST00000396548 PSMA7O14818 248 aa14.11□□□□□ -0.15
TRIM39-204ENST00000396548 GGPS1O95749 300 aa14.11□□□□□ -0.15
TRIM39-204ENST00000396548 TPM4P67936 248 aa14.11□□□□□ -0.15
TRIM39-204ENST00000396548 SFR1Q86XK3 245 aa14.11□□□□□ -0.15
TRIM39-204ENST00000396548 ZC3H3Q8IXZ2 948 aaKnown RBP14.11□□□□□ -0.15
TRIM39-204ENST00000396548 ATP6V0A1Q93050 837 aa14.11□□□□□ -0.15
TRIM39-204ENST00000396548 NAP1L5Q96NT1 182 aaPredicted RBP14.11□□□□□ -0.15
TRIM39-204ENST00000396548 CREBZFQ9NS37 354 aa14.11□□□□□ -0.15
TRIM39-204ENST00000396548 TCEAL9Q9UHQ7 104 aa14.11□□□□□ -0.15
TRIM39-204ENST00000396548 SIP14410 1827 aa14.11□□□□□ -0.15
TRIM39-204ENST00000396548 ARHGEF35A5YM69 484 aa14.1□□□□□ -0.15
TRIM39-204ENST00000396548 GAP43P17677 238 aa14.1□□□□□ -0.15
TRIM39-204ENST00000396548 STIM1Q13586 685 aa14.1□□□□□ -0.15
TRIM39-204ENST00000396548 LRRC41Q15345 812 aa14.1□□□□□ -0.15
TRIM39-204ENST00000396548 HERC4Q5GLZ8 1057 aaPredicted RBP14.1□□□□□ -0.15
TRIM39-204ENST00000396548 EMID1Q96A84 441 aaPredicted RBP14.1□□□□□ -0.15
TRIM39-204ENST00000396548 TRIM5Q9C035 493 aa14.1□□□□□ -0.15
TRIM39-204ENST00000396548 XPO4Q9C0E2 1151 aaKnown RBP14.1□□□□□ -0.15
TRIM39-204ENST00000396548 COL4A3BPQ9Y5P4 624 aa14.1□□□□□ -0.15
TRIM39-204ENST00000396548 ARHGAP1Q07960 439 aa14.1□□□□□ -0.15
TRIM39-204ENST00000396548 MAP2K5Q13163 448 aa14.1□□□□□ -0.15
TRIM39-204ENST00000396548 HSDL1Q3SXM5 330 aa14.1□□□□□ -0.15
TRIM39-204ENST00000396548 PLA2G4FQ68DD2 849 aa14.1□□□□□ -0.15
TRIM39-204ENST00000396548 ZNF784Q8NCA9 323 aaPredicted RBP14.1□□□□□ -0.15
TRIM39-204ENST00000396548 TINF2Q9BSI4 451 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms