RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 CXCL10P02778 98 aa19.68■□□□□ 0.74
TNFSF13-205ENST00000396545 CKBP12277 381 aa19.68■□□□□ 0.74
TNFSF13-205ENST00000396545 MYCLP12524 364 aaPredicted RBP19.68■□□□□ 0.74
TNFSF13-205ENST00000396545 GNA11P29992 359 aa19.68■□□□□ 0.74
TNFSF13-205ENST00000396545 NDUFA8P51970 172 aa19.68■□□□□ 0.74
TNFSF13-205ENST00000396545 WDR5P61964 334 aaKnown RBP19.68■□□□□ 0.74
TNFSF13-205ENST00000396545 NR5A1Q13285 461 aa19.68■□□□□ 0.74
TNFSF13-205ENST00000396545 CELF3Q5SZQ8 465 aaKnown RBP19.68■□□□□ 0.74
TNFSF13-205ENST00000396545 TNFRSF25Q93038 417 aa19.68■□□□□ 0.74
TNFSF13-205ENST00000396545 PCDHA4Q9UN74 947 aa19.68■□□□□ 0.74
TNFSF13-205ENST00000396545 HPSEQ9Y251 543 aa19.68■□□□□ 0.74
TNFSF13-205ENST00000396545 MYH7BA7E2Y1 1941 aa19.67■□□□□ 0.74
TNFSF13-205ENST00000396545 A0A1B0GVL5 298 aa19.67■□□□□ 0.74
TNFSF13-205ENST00000396545 STXBP3O00186 592 aa19.67■□□□□ 0.74
TNFSF13-205ENST00000396545 RFXAPO00287 272 aa19.67■□□□□ 0.74
TNFSF13-205ENST00000396545 NBNO60934 754 aa19.67■□□□□ 0.74
TNFSF13-205ENST00000396545 PPFIA4O75335 1185 aa19.67■□□□□ 0.74
TNFSF13-205ENST00000396545 KCNJ6P48051 423 aa19.67■□□□□ 0.74
TNFSF13-205ENST00000396545 TRAPPC10P48553 1259 aa19.67■□□□□ 0.74
TNFSF13-205ENST00000396545 SP2Q02086 613 aa19.67■□□□□ 0.74
TNFSF13-205ENST00000396545 PTK7Q13308 1070 aa19.67■□□□□ 0.74
TNFSF13-205ENST00000396545 TRIM71Q2Q1W2 868 aaKnown RBP19.67■□□□□ 0.74
TNFSF13-205ENST00000396545 WWC2Q6AWC2 1192 aa19.67■□□□□ 0.74
TNFSF13-205ENST00000396545 HEATR3Q7Z4Q2 680 aa19.67■□□□□ 0.74
TNFSF13-205ENST00000396545 TEX2Q8IWB9 1127 aa19.67■□□□□ 0.74
TNFSF13-205ENST00000396545 MICALL1Q8N3F8 863 aa19.67■□□□□ 0.74
TNFSF13-205ENST00000396545 FAM200AQ8TCP9 573 aa19.67■□□□□ 0.74
TNFSF13-205ENST00000396545 ADAMTS19Q8TE59 1207 aa19.67■□□□□ 0.74
TNFSF13-205ENST00000396545 ZMYND12Q9H0C1 365 aa19.67■□□□□ 0.74
TNFSF13-205ENST00000396545 GLT8D2Q9H1C3 349 aa19.67■□□□□ 0.74
TNFSF13-205ENST00000396545 CERS4Q9HA82 394 aa19.67■□□□□ 0.74
TNFSF13-205ENST00000396545 C6orf50Q9HD87 102 aa19.67■□□□□ 0.74
TNFSF13-205ENST00000396545 NOL7Q9UMY1 257 aaKnown RBP19.67■□□□□ 0.74
TNFSF13-205ENST00000396545 MTCH2Q9Y6C9 303 aa19.67■□□□□ 0.74
TNFSF13-205ENST00000396545 GCOM1H8Y6P7 765 aaPredicted RBP19.66■□□□□ 0.74
TNFSF13-205ENST00000396545 GGPS1O95749 300 aa19.66■□□□□ 0.74
TNFSF13-205ENST00000396545 POLR2MP0CAP2 368 aa19.66■□□□□ 0.74
TNFSF13-205ENST00000396545 UBA1P22314 1058 aaKnown RBP19.66■□□□□ 0.74
TNFSF13-205ENST00000396545 MARCKSP29966 332 aaPredicted RBP19.66■□□□□ 0.74
TNFSF13-205ENST00000396545 HSDL1Q3SXM5 330 aa19.66■□□□□ 0.74
TNFSF13-205ENST00000396545 CNKSR3Q6P9H4 555 aa19.66■□□□□ 0.74
TNFSF13-205ENST00000396545 TRAF7Q6Q0C0 670 aa19.66■□□□□ 0.74
TNFSF13-205ENST00000396545 SASS6Q6UVJ0 657 aa19.66■□□□□ 0.74
TNFSF13-205ENST00000396545 BLIDQ8IZY5 108 aa19.66■□□□□ 0.74
TNFSF13-205ENST00000396545 WNT8BQ93098 351 aa19.66■□□□□ 0.74
TNFSF13-205ENST00000396545 SPATA33Q96N06 139 aa19.66■□□□□ 0.74
TNFSF13-205ENST00000396545 TSPYL2Q9H2G4 693 aaPredicted RBP19.66■□□□□ 0.74
TNFSF13-205ENST00000396545 CEP131Q9UPN4 1083 aa19.66■□□□□ 0.74
TNFSF13-205ENST00000396545 CAVIN2O95810 425 aa19.66■□□□□ 0.74
TNFSF13-205ENST00000396545 BMP15O95972 392 aa19.66■□□□□ 0.74
TNFSF13-205ENST00000396545 TGFB3P10600 412 aa19.66■□□□□ 0.74
TNFSF13-205ENST00000396545 PFKFB1P16118 471 aa19.66■□□□□ 0.74
TNFSF13-205ENST00000396545 CCND2P30279 289 aa19.66■□□□□ 0.74
TNFSF13-205ENST00000396545 NAPAP54920 295 aa19.66■□□□□ 0.74
TNFSF13-205ENST00000396545 PIBF1Q8WXW3 757 aa19.66■□□□□ 0.74
TNFSF13-205ENST00000396545 ARNTL2Q8WYA1 636 aa19.66■□□□□ 0.74
TNFSF13-205ENST00000396545 TRIM44Q96DX7 344 aaPredicted RBP19.66■□□□□ 0.74
TNFSF13-205ENST00000396545 GTPBP6O43824 516 aaPredicted RBP19.65■□□□□ 0.74
TNFSF13-205ENST00000396545 TLL1O43897 1013 aa19.65■□□□□ 0.74
TNFSF13-205ENST00000396545 SORBS3O60504 671 aa19.65■□□□□ 0.74
TNFSF13-205ENST00000396545 ZNF200P98182 395 aaPredicted RBP19.65■□□□□ 0.74
TNFSF13-205ENST00000396545 HIC1Q14526 733 aa19.65■□□□□ 0.74
TNFSF13-205ENST00000396545 TCTN1Q2MV58 587 aa19.65■□□□□ 0.74
TNFSF13-205ENST00000396545 HS1BP3Q53T59 392 aa19.65■□□□□ 0.74
TNFSF13-205ENST00000396545 RESP18Q5W5W9 173 aa19.65■□□□□ 0.74
TNFSF13-205ENST00000396545 SHC4Q6S5L8 630 aa19.65■□□□□ 0.74
TNFSF13-205ENST00000396545 GPKOWQ92917 476 aaPredicted RBP eCLIP19.65■□□□□ 0.74
TNFSF13-205ENST00000396545 TIGD1Q96MW7 591 aa19.65■□□□□ 0.74
TNFSF13-205ENST00000396545 C16orf70Q9BSU1 422 aa19.65■□□□□ 0.74
TNFSF13-205ENST00000396545 FRMPD4Q14CM0 1322 aa19.65■□□□□ 0.74
TNFSF13-205ENST00000396545 DEFB103AP81534 67 aa19.64■□□□□ 0.73
TNFSF13-205ENST00000396545 MBTPS1Q14703 1052 aa19.64■□□□□ 0.73
TNFSF13-205ENST00000396545 ANO6Q4KMQ2 910 aa19.64■□□□□ 0.73
TNFSF13-205ENST00000396545 ZNF618Q5T7W0 954 aa19.64■□□□□ 0.73
TNFSF13-205ENST00000396545 SPRED2Q7Z698 418 aa19.64■□□□□ 0.73
TNFSF13-205ENST00000396545 TMCO2Q7Z6W1 182 aaPredicted RBP19.64■□□□□ 0.73
TNFSF13-205ENST00000396545 FCHSD1Q86WN1 690 aa19.64■□□□□ 0.73
TNFSF13-205ENST00000396545 KRI1Q8N9T8 703 aaKnown RBP19.64■□□□□ 0.73
TNFSF13-205ENST00000396545 FBXO2Q9UK22 296 aaPredicted RBP19.64■□□□□ 0.73
TNFSF13-205ENST00000396545 ABHD14A-ACY1A0A1B0GW23 586 aa19.63■□□□□ 0.73
TNFSF13-205ENST00000396545 LCHNA4D1U4 455 aa19.63■□□□□ 0.73
TNFSF13-205ENST00000396545 ZNF202O95125 648 aa19.63■□□□□ 0.73
TNFSF13-205ENST00000396545 TFF2Q03403 129 aa19.63■□□□□ 0.73
TNFSF13-205ENST00000396545 ZFP91Q96JP5 570 aaPredicted RBP19.63■□□□□ 0.73
TNFSF13-205ENST00000396545 UHRF1Q96T88 793 aaPredicted RBP19.63■□□□□ 0.73
TNFSF13-205ENST00000396545 PCDHB6Q9Y5E3 794 aa19.63■□□□□ 0.73
TNFSF13-205ENST00000396545 STX1AQ16623 288 aa19.62■□□□□ 0.73
TNFSF13-205ENST00000396545 EARS2Q5JPH6 523 aaKnown RBP19.62■□□□□ 0.73
TNFSF13-205ENST00000396545 SERINC5Q86VE9 423 aa19.62■□□□□ 0.73
TNFSF13-205ENST00000396545 ZNF579Q8NAF0 562 aaKnown RBP19.62■□□□□ 0.73
TNFSF13-205ENST00000396545 MLXIPQ9HAP2 919 aa19.62■□□□□ 0.73
TNFSF13-205ENST00000396545 SMCO2A6NFE2 343 aa19.61■□□□□ 0.73
TNFSF13-205ENST00000396545 M0R2N6 131 aa19.61■□□□□ 0.73
TNFSF13-205ENST00000396545 LPXNO60711 386 aa19.61■□□□□ 0.73
TNFSF13-205ENST00000396545 EFCAB14O75071 495 aa19.61■□□□□ 0.73
TNFSF13-205ENST00000396545 GJB5O95377 273 aa19.61■□□□□ 0.73
TNFSF13-205ENST00000396545 BMP1P13497 986 aa19.61■□□□□ 0.73
TNFSF13-205ENST00000396545 HOXC8P31273 242 aa19.61■□□□□ 0.73
TNFSF13-205ENST00000396545 MRPS9P82933 396 aaKnown RBP19.61■□□□□ 0.73
TNFSF13-205ENST00000396545 GRB10Q13322 594 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms