RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 SCAF8Q9UPN6 1271 aaKnown RBP7.1□□□□□ -1.27
AP3S1-202ENST00000395548 PCDHA11Q9Y5I1 949 aa7.1□□□□□ -1.27
AP3S1-202ENST00000395548 USP34Q70CQ2 3546 aa7.1□□□□□ -1.27
AP3S1-202ENST00000395548 CCL15-CCL14A0A0B4J2E2 113 aa7.09□□□□□ -1.27
AP3S1-202ENST00000395548 PI4K2BG5E9Z4 385 aa7.09□□□□□ -1.27
AP3S1-202ENST00000395548 RNMTO43148 476 aaKnown RBP7.09□□□□□ -1.27
AP3S1-202ENST00000395548 ADCY3O60266 1144 aa7.09□□□□□ -1.27
AP3S1-202ENST00000395548 CCNFP41002 786 aa7.09□□□□□ -1.27
AP3S1-202ENST00000395548 CRKP46108 304 aa7.09□□□□□ -1.27
AP3S1-202ENST00000395548 MMP14P50281 582 aa7.09□□□□□ -1.27
AP3S1-202ENST00000395548 CCL15Q16663 113 aa7.09□□□□□ -1.27
AP3S1-202ENST00000395548 LRRFIP1Q32MZ4 808 aaKnown RBP7.09□□□□□ -1.27
AP3S1-202ENST00000395548 SUPT20HL1Q3ZLR7 823 aa7.09□□□□□ -1.27
AP3S1-202ENST00000395548 ANKRD13AQ8IZ07 590 aa7.09□□□□□ -1.27
AP3S1-202ENST00000395548 LILRA2Q8N149 483 aa7.09□□□□□ -1.27
AP3S1-202ENST00000395548 NT5C1AQ9BXI3 368 aa7.09□□□□□ -1.27
AP3S1-202ENST00000395548 UBP1Q9NZI7 540 aa7.09□□□□□ -1.27
AP3S1-202ENST00000395548 ALPK3Q96L96 1907 aa7.09□□□□□ -1.27
AP3S1-202ENST00000395548 TAF1P21675 1872 aa7.09□□□□□ -1.28
AP3S1-202ENST00000395548 IBTKQ9P2D0 1353 aaPredicted RBP7.08□□□□□ -1.28
AP3S1-202ENST00000395548 LAMB1P07942 1786 aa7.08□□□□□ -1.28
AP3S1-202ENST00000395548 ABCC4O15439 1325 aa7.08□□□□□ -1.28
AP3S1-202ENST00000395548 FITM1A5D6W6 292 aa7.08□□□□□ -1.28
AP3S1-202ENST00000395548 UBOX5O94941 541 aa7.08□□□□□ -1.28
AP3S1-202ENST00000395548 ZGLP1P0C6A0 271 aa7.08□□□□□ -1.28
AP3S1-202ENST00000395548 ERVFC1P60507 584 aa7.08□□□□□ -1.28
AP3S1-202ENST00000395548 DUSP4Q13115 394 aa7.08□□□□□ -1.28
AP3S1-202ENST00000395548 NMIQ13287 307 aaPredicted RBP7.08□□□□□ -1.28
AP3S1-202ENST00000395548 NBPF9Q3BBW0 867 aa7.08□□□□□ -1.28
AP3S1-202ENST00000395548 OVOS1Q6IE37 1185 aa7.08□□□□□ -1.28
AP3S1-202ENST00000395548 GK5Q6ZS86 529 aa7.08□□□□□ -1.28
AP3S1-202ENST00000395548 SPPL2CQ8IUH8 684 aa7.08□□□□□ -1.28
AP3S1-202ENST00000395548 FBXO15Q8NCQ5 510 aaPredicted RBP7.08□□□□□ -1.28
AP3S1-202ENST00000395548 BRI3BPQ8WY22 251 aa7.08□□□□□ -1.28
AP3S1-202ENST00000395548 NKD1Q969G9 470 aa7.08□□□□□ -1.28
AP3S1-202ENST00000395548 CNNM2Q9H8M5 875 aa7.08□□□□□ -1.28
AP3S1-202ENST00000395548 XIRP2A4UGR9 3374 aa7.08□□□□□ -1.28
AP3S1-202ENST00000395548 COL1A1P02452 1464 aaPredicted RBP7.07□□□□□ -1.28
AP3S1-202ENST00000395548 SHISA3A0PJX4 238 aa7.07□□□□□ -1.28
AP3S1-202ENST00000395548 RAP1GAPP47736 663 aa7.07□□□□□ -1.28
AP3S1-202ENST00000395548 CLCQ05315 142 aa7.07□□□□□ -1.28
AP3S1-202ENST00000395548 PRKCZQ05513 592 aa7.07□□□□□ -1.28
AP3S1-202ENST00000395548 SHHQ15465 462 aa7.07□□□□□ -1.28
AP3S1-202ENST00000395548 NBPF12Q5TAG4 269 aaPredicted RBP7.07□□□□□ -1.28
AP3S1-202ENST00000395548 ZNF790Q6PG37 636 aa7.07□□□□□ -1.28
AP3S1-202ENST00000395548 C17orf99Q6UX52 265 aa7.07□□□□□ -1.28
AP3S1-202ENST00000395548 SYDE1Q6ZW31 735 aaPredicted RBP7.07□□□□□ -1.28
AP3S1-202ENST00000395548 DDX46Q7L014 1031 aaKnown RBP7.07□□□□□ -1.28
AP3S1-202ENST00000395548 KIAA0825Q8IV33 1275 aa7.07□□□□□ -1.28
AP3S1-202ENST00000395548 SLITRK4Q8IW52 837 aa7.07□□□□□ -1.28
AP3S1-202ENST00000395548 FAM43AQ8N2R8 423 aa7.07□□□□□ -1.28
AP3S1-202ENST00000395548 SYTL5Q8TDW5 730 aaPredicted RBP7.07□□□□□ -1.28
AP3S1-202ENST00000395548 OPTNQ96CV9 577 aa7.07□□□□□ -1.28
AP3S1-202ENST00000395548 ATG4CQ96DT6 458 aa7.07□□□□□ -1.28
AP3S1-202ENST00000395548 DIRC2Q96SL1 478 aa7.07□□□□□ -1.28
AP3S1-202ENST00000395548 SPON2Q9BUD6 331 aa7.07□□□□□ -1.28
AP3S1-202ENST00000395548 NSUN3Q9H649 340 aaKnown RBP7.07□□□□□ -1.28
AP3S1-202ENST00000395548 WNT10BO00744 389 aa7.06□□□□□ -1.28
AP3S1-202ENST00000395548 CLEC3AO75596 197 aa7.06□□□□□ -1.28
AP3S1-202ENST00000395548 ZNF76P36508 570 aa7.06□□□□□ -1.28
AP3S1-202ENST00000395548 TEKQ02763 1124 aa7.06□□□□□ -1.28
AP3S1-202ENST00000395548 CHRNEQ04844 493 aa7.06□□□□□ -1.28
AP3S1-202ENST00000395548 GRAPQ13588 217 aa7.06□□□□□ -1.28
AP3S1-202ENST00000395548 NR0B2Q15466 257 aa7.06□□□□□ -1.28
AP3S1-202ENST00000395548 RNF111Q6ZNA4 994 aa7.06□□□□□ -1.28
AP3S1-202ENST00000395548 NLRC3Q7RTR2 1065 aa7.06□□□□□ -1.28
AP3S1-202ENST00000395548 PPP1R42Q7Z4L9 355 aa7.06□□□□□ -1.28
AP3S1-202ENST00000395548 ZBTB38Q8NAP3 1195 aaPredicted RBP7.06□□□□□ -1.28
AP3S1-202ENST00000395548 DAGLBQ8NCG7 672 aa7.06□□□□□ -1.28
AP3S1-202ENST00000395548 GRAPLQ8TC17 118 aaPredicted RBP7.06□□□□□ -1.28
AP3S1-202ENST00000395548 UBXN4Q92575 508 aa7.06□□□□□ -1.28
AP3S1-202ENST00000395548 GMLQ99445 158 aa7.06□□□□□ -1.28
AP3S1-202ENST00000395548 KRTAP4-7Q9BYR0 210 aa7.06□□□□□ -1.28
AP3S1-202ENST00000395548 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.06□□□□□ -1.28
AP3S1-202ENST00000395548 EPB41L4BQ9H329 900 aa7.06□□□□□ -1.28
AP3S1-202ENST00000395548 DCP1AQ9NPI6 582 aaPredicted RBP7.06□□□□□ -1.28
AP3S1-202ENST00000395548 PPP2R3BQ9Y5P8 575 aa7.06□□□□□ -1.28
AP3S1-202ENST00000395548 ATRXP46100 2492 aa7.06□□□□□ -1.28
AP3S1-202ENST00000395548 DNAH12Q6ZR08 3092 aa7.06□□□□□ -1.28
AP3S1-202ENST00000395548 SSU72P8A0A1W2PR75 194 aa7.05□□□□□ -1.28
AP3S1-202ENST00000395548 ERVV-1B6SEH8 477 aa7.05□□□□□ -1.28
AP3S1-202ENST00000395548 TSPAN15O95858 294 aa7.05□□□□□ -1.28
AP3S1-202ENST00000395548 CETPP11597 493 aa7.05□□□□□ -1.28
AP3S1-202ENST00000395548 COL9A2Q14055 689 aaPredicted RBP7.05□□□□□ -1.28
AP3S1-202ENST00000395548 ACAP1Q15027 740 aa7.05□□□□□ -1.28
AP3S1-202ENST00000395548 SF3A1Q15459 793 aaKnown RBP7.05□□□□□ -1.28
AP3S1-202ENST00000395548 HLFQ16534 295 aa7.05□□□□□ -1.28
AP3S1-202ENST00000395548 ZNF655Q8N720 491 aaPredicted RBP7.05□□□□□ -1.28
AP3S1-202ENST00000395548 ANKS4BQ8N8V4 417 aa7.05□□□□□ -1.28
AP3S1-202ENST00000395548 HDAC8Q9BY41 377 aa7.05□□□□□ -1.28
AP3S1-202ENST00000395548 DEFB129Q9H1M3 183 aa7.05□□□□□ -1.28
AP3S1-202ENST00000395548 CWC22Q9HCG8 908 aaKnown RBP7.05□□□□□ -1.28
AP3S1-202ENST00000395548 METTL5Q9NRN9 209 aaKnown RBP7.05□□□□□ -1.28
AP3S1-202ENST00000395548 POLKQ9UBT6 870 aa7.05□□□□□ -1.28
AP3S1-202ENST00000395548 FZD1Q9UP38 647 aa7.05□□□□□ -1.28
AP3S1-202ENST00000395548 SPTBN4Q9H254 2564 aa7.05□□□□□ -1.28
AP3S1-202ENST00000395548 EPG5Q9HCE0 2579 aa7.05□□□□□ -1.28
AP3S1-202ENST00000395548 MEIS3P2A8K0S8 358 aa7.04□□□□□ -1.28
AP3S1-202ENST00000395548 NFIBO00712 420 aa7.04□□□□□ -1.28
AP3S1-202ENST00000395548 ALADP13716 330 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms