RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 JAKMIP1Q96N16 626 aaKnown RBP15.46■□□□□ 0.07
SCAF11-203ENST00000395453 GLT8D2Q9H1C3 349 aa15.46■□□□□ 0.07
SCAF11-203ENST00000395453 NSUN3Q9H649 340 aaKnown RBP15.46■□□□□ 0.07
SCAF11-203ENST00000395453 KCNH7Q9NS40 1196 aa15.46■□□□□ 0.07
SCAF11-203ENST00000395453 NID2Q14112 1375 aa15.45■□□□□ 0.06
SCAF11-203ENST00000395453 CCDC196A0A1B0GTZ2 297 aa15.45■□□□□ 0.06
SCAF11-203ENST00000395453 RBAK-RBAKDNI3L0D1 243 aa15.45■□□□□ 0.06
SCAF11-203ENST00000395453 IRS1P35568 1242 aa15.45■□□□□ 0.06
SCAF11-203ENST00000395453 ADCY7P51828 1080 aa15.45■□□□□ 0.06
SCAF11-203ENST00000395453 GPM6BQ13491 265 aa15.45■□□□□ 0.06
SCAF11-203ENST00000395453 PFKFB3Q16875 520 aaPredicted RBP15.45■□□□□ 0.06
SCAF11-203ENST00000395453 BLOC1S2Q6QNY1 142 aa15.45■□□□□ 0.06
SCAF11-203ENST00000395453 RPAINQ86UA6 219 aa15.45■□□□□ 0.06
SCAF11-203ENST00000395453 POP1Q99575 1024 aaKnown RBP15.45■□□□□ 0.06
SCAF11-203ENST00000395453 ANO3Q9BYT9 981 aa15.45■□□□□ 0.06
SCAF11-203ENST00000395453 OSBPL7Q9BZF2 842 aa15.45■□□□□ 0.06
SCAF11-203ENST00000395453 CLDND1Q9NY35 253 aa15.45■□□□□ 0.06
SCAF11-203ENST00000395453 C5orf42Q9H799 3197 aa15.45■□□□□ 0.06
SCAF11-203ENST00000395453 NFASCO94856 1347 aa15.44■□□□□ 0.06
SCAF11-203ENST00000395453 MEIS1O00470 390 aa15.44■□□□□ 0.06
SCAF11-203ENST00000395453 EPB41L2O43491 1005 aaKnown RBP15.44■□□□□ 0.06
SCAF11-203ENST00000395453 REC8O95072 547 aa15.44■□□□□ 0.06
SCAF11-203ENST00000395453 RPS6KB1P23443 525 aa15.44■□□□□ 0.06
SCAF11-203ENST00000395453 SREBF1P36956 1147 aa15.44■□□□□ 0.06
SCAF11-203ENST00000395453 METAP2P50579 478 aaKnown RBP eCLIP15.44■□□□□ 0.06
SCAF11-203ENST00000395453 EVCP57679 992 aa15.44■□□□□ 0.06
SCAF11-203ENST00000395453 ARHGAP4P98171 946 aa15.44■□□□□ 0.06
SCAF11-203ENST00000395453 FGD1P98174 961 aa15.44■□□□□ 0.06
SCAF11-203ENST00000395453 AP3B2Q13367 1082 aa15.44■□□□□ 0.06
SCAF11-203ENST00000395453 CEP55Q53EZ4 464 aa15.44■□□□□ 0.06
SCAF11-203ENST00000395453 CRYGNQ8WXF5 182 aa15.44■□□□□ 0.06
SCAF11-203ENST00000395453 BRF1Q92994 677 aa15.44■□□□□ 0.06
SCAF11-203ENST00000395453 YME1L1Q96TA2 773 aa15.44■□□□□ 0.06
SCAF11-203ENST00000395453 PCYT2Q99447 389 aa15.44■□□□□ 0.06
SCAF11-203ENST00000395453 SMARCAD1Q9H4L7 1026 aa15.44■□□□□ 0.06
SCAF11-203ENST00000395453 ERAP1Q9NZ08 941 aa15.44■□□□□ 0.06
SCAF11-203ENST00000395453 MICAL3Q7RTP6 2002 aa15.44■□□□□ 0.06
SCAF11-203ENST00000395453 ESYT2A0FGR8 921 aa15.43■□□□□ 0.06
SCAF11-203ENST00000395453 MBLAC1A4D2B0 266 aaPredicted RBP15.43■□□□□ 0.06
SCAF11-203ENST00000395453 PRPF3O43395 683 aaKnown RBP15.43■□□□□ 0.06
SCAF11-203ENST00000395453 ATG7O95352 703 aa15.43■□□□□ 0.06
SCAF11-203ENST00000395453 ARP10275 920 aa15.43■□□□□ 0.06
SCAF11-203ENST00000395453 SCG2P13521 617 aa15.43■□□□□ 0.06
SCAF11-203ENST00000395453 PSMA5P28066 241 aa15.43■□□□□ 0.06
SCAF11-203ENST00000395453 NTRK3Q16288 839 aa15.43■□□□□ 0.06
SCAF11-203ENST00000395453 PKN1Q16512 942 aa15.43■□□□□ 0.06
SCAF11-203ENST00000395453 HERC4Q5GLZ8 1057 aaPredicted RBP15.43■□□□□ 0.06
SCAF11-203ENST00000395453 MARCH8Q5T0T0 291 aa15.43■□□□□ 0.06
SCAF11-203ENST00000395453 NIPA1Q7RTP0 329 aa15.43■□□□□ 0.06
SCAF11-203ENST00000395453 TMEM192Q8IY95 271 aa15.43■□□□□ 0.06
SCAF11-203ENST00000395453 PGBD1Q96JS3 809 aa15.43■□□□□ 0.06
SCAF11-203ENST00000395453 ZMYND12Q9H0C1 365 aa15.43■□□□□ 0.06
SCAF11-203ENST00000395453 JPH1Q9HDC5 661 aaPredicted RBP15.43■□□□□ 0.06
SCAF11-203ENST00000395453 TMEM260Q9NX78 707 aa15.43■□□□□ 0.06
SCAF11-203ENST00000395453 PKD2L1Q9P0L9 805 aa15.43■□□□□ 0.06
SCAF11-203ENST00000395453 SLC9A2Q9UBY0 812 aa15.43■□□□□ 0.06
SCAF11-203ENST00000395453 MYO7AQ13402 2215 aa15.43■□□□□ 0.06
SCAF11-203ENST00000395453 USP34Q70CQ2 3546 aa15.43■□□□□ 0.06
SCAF11-203ENST00000395453 ST18O60284 1047 aa15.43■□□□□ 0.06
SCAF11-203ENST00000395453 CHRNA1P02708 482 aa15.43■□□□□ 0.06
SCAF11-203ENST00000395453 CYP3A4P08684 503 aa15.43■□□□□ 0.06
SCAF11-203ENST00000395453 NUBP1P53384 320 aa15.43■□□□□ 0.06
SCAF11-203ENST00000395453 PTPN5P54829 565 aa15.43■□□□□ 0.06
SCAF11-203ENST00000395453 ITGB3BPQ13352 177 aaPredicted RBP15.43■□□□□ 0.06
SCAF11-203ENST00000395453 SMAD2Q15796 467 aaKnown RBP15.43■□□□□ 0.06
SCAF11-203ENST00000395453 IER5LQ5T953 404 aa15.43■□□□□ 0.06
SCAF11-203ENST00000395453 TAF2Q6P1X5 1199 aa15.43■□□□□ 0.06
SCAF11-203ENST00000395453 RUFY4Q6ZNE9 571 aa15.43■□□□□ 0.06
SCAF11-203ENST00000395453 SEPT8Q92599 483 aa15.43■□□□□ 0.06
SCAF11-203ENST00000395453 GLG1Q92896 1179 aa15.43■□□□□ 0.06
SCAF11-203ENST00000395453 TOP1MTQ969P6 601 aa15.43■□□□□ 0.06
SCAF11-203ENST00000395453 PRRX2Q99811 253 aa15.43■□□□□ 0.06
SCAF11-203ENST00000395453 AGO4Q9HCK5 861 aaKnown RBP15.43■□□□□ 0.06
SCAF11-203ENST00000395453 MUTYHQ9UIF7 546 aa15.43■□□□□ 0.06
SCAF11-203ENST00000395453 NAP1L2Q9ULW6 460 aaPredicted RBP15.43■□□□□ 0.06
SCAF11-203ENST00000395453 CFAP54Q96N23 3096 aa15.42■□□□□ 0.06
SCAF11-203ENST00000395453 ADAMTS3O15072 1205 aa15.42■□□□□ 0.06
SCAF11-203ENST00000395453 CTSHP09668 335 aa15.42■□□□□ 0.06
SCAF11-203ENST00000395453 MARK3P27448 753 aa15.42■□□□□ 0.06
SCAF11-203ENST00000395453 ACTR2P61160 394 aa15.42■□□□□ 0.06
SCAF11-203ENST00000395453 PPFIA1Q13136 1202 aa15.42■□□□□ 0.06
SCAF11-203ENST00000395453 GRIK4Q16099 956 aa15.42■□□□□ 0.06
SCAF11-203ENST00000395453 MCTP2Q6DN12 878 aa15.42■□□□□ 0.06
SCAF11-203ENST00000395453 PLPPR4Q7Z2D5 763 aa15.42■□□□□ 0.06
SCAF11-203ENST00000395453 BMP8AQ7Z5Y6 402 aa15.42■□□□□ 0.06
SCAF11-203ENST00000395453 PHOX2BQ99453 314 aa15.42■□□□□ 0.06
SCAF11-203ENST00000395453 SDF4Q9BRK5 362 aa15.42■□□□□ 0.06
SCAF11-203ENST00000395453 PCDHB13Q9Y5F0 798 aa15.42■□□□□ 0.06
SCAF11-203ENST00000395453 TECTAO75443 2155 aa15.41■□□□□ 0.06
SCAF11-203ENST00000395453 IGLV3-22A0A075B6J6 115 aa15.41■□□□□ 0.06
SCAF11-203ENST00000395453 IGKV6D-21A0A0A0MT36 114 aa15.41■□□□□ 0.06
SCAF11-203ENST00000395453 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.41■□□□□ 0.06
SCAF11-203ENST00000395453 RRN3P2A6NIE6 340 aa15.41■□□□□ 0.06
SCAF11-203ENST00000395453 FAM86B1E9PN63 330 aa15.41■□□□□ 0.06
SCAF11-203ENST00000395453 UPP2O95045 317 aa15.41■□□□□ 0.06
SCAF11-203ENST00000395453 SEC24BO95487 1268 aa15.41■□□□□ 0.06
SCAF11-203ENST00000395453 FAM86B2P0C5J1 330 aa15.41■□□□□ 0.06
SCAF11-203ENST00000395453 INSRRP14616 1297 aa15.41■□□□□ 0.06
SCAF11-203ENST00000395453 PDIA3P30101 505 aaKnown RBP15.41■□□□□ 0.06
SCAF11-203ENST00000395453 LTBRP36941 435 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms