RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 CATSPER3Q86XQ3 398 aa21.45■■□□□ 1.02
LMNB1-202ENST00000395354 ZNF830Q96NB3 372 aaPredicted RBP21.45■■□□□ 1.02
LMNB1-202ENST00000395354 RIT2Q99578 217 aa21.45■■□□□ 1.02
LMNB1-202ENST00000395354 KCNF1Q9H3M0 494 aa21.45■■□□□ 1.02
LMNB1-202ENST00000395354 PDGFCQ9NRA1 345 aa21.45■■□□□ 1.02
LMNB1-202ENST00000395354 KCNH7Q9NS40 1196 aa21.45■■□□□ 1.02
LMNB1-202ENST00000395354 ZHX1Q9UKY1 873 aaPredicted RBP21.45■■□□□ 1.02
LMNB1-202ENST00000395354 SPATA31C2B4DYI2 1134 aa21.44■■□□□ 1.02
LMNB1-202ENST00000395354 HMGCRP04035 888 aa21.44■■□□□ 1.02
LMNB1-202ENST00000395354 ARP10275 920 aa21.44■■□□□ 1.02
LMNB1-202ENST00000395354 TRIM32Q13049 653 aa21.44■■□□□ 1.02
LMNB1-202ENST00000395354 LRCH2Q5VUJ6 765 aa21.44■■□□□ 1.02
LMNB1-202ENST00000395354 DDX12PQ92771 950 aa21.44■■□□□ 1.02
LMNB1-202ENST00000395354 CDHR1Q96JP9 859 aa21.44■■□□□ 1.02
LMNB1-202ENST00000395354 TUFT1Q9NNX1 390 aa21.44■■□□□ 1.02
LMNB1-202ENST00000395354 POTEB3A0JP26 581 aa21.44■■□□□ 1.02
LMNB1-202ENST00000395354 PLA2G4BP0C869 781 aa21.44■■□□□ 1.02
LMNB1-202ENST00000395354 SPATA31C1P0DKV0 1188 aa21.44■■□□□ 1.02
LMNB1-202ENST00000395354 ICAM3P32942 547 aa21.44■■□□□ 1.02
LMNB1-202ENST00000395354 CACNB2Q08289 660 aaPredicted RBP21.44■■□□□ 1.02
LMNB1-202ENST00000395354 POTEBQ6S5H4 581 aa21.44■■□□□ 1.02
LMNB1-202ENST00000395354 NOC3LQ8WTT2 800 aaKnown RBP21.44■■□□□ 1.02
LMNB1-202ENST00000395354 SCFD2Q8WU76 684 aa21.44■■□□□ 1.02
LMNB1-202ENST00000395354 NAP1L5Q96NT1 182 aaPredicted RBP21.44■■□□□ 1.02
LMNB1-202ENST00000395354 PRDM10Q9NQV6 1147 aa21.44■■□□□ 1.02
LMNB1-202ENST00000395354 DNM3Q9UQ16 869 aa21.44■■□□□ 1.02
LMNB1-202ENST00000395354 KIAA1217Q5T5P2 1943 aa21.43■■□□□ 1.02
LMNB1-202ENST00000395354 BICDL2A1A5D9 508 aa21.43■■□□□ 1.02
LMNB1-202ENST00000395354 ZNF865P0CJ78 1059 aaPredicted RBP21.43■■□□□ 1.02
LMNB1-202ENST00000395354 TGFB3P10600 412 aa21.43■■□□□ 1.02
LMNB1-202ENST00000395354 EHHADHQ08426 723 aa21.43■■□□□ 1.02
LMNB1-202ENST00000395354 KCNV1Q6PIU1 500 aa21.43■■□□□ 1.02
LMNB1-202ENST00000395354 VSTM4Q8IW00 320 aa21.43■■□□□ 1.02
LMNB1-202ENST00000395354 UIMC1Q96RL1 719 aa21.43■■□□□ 1.02
LMNB1-202ENST00000395354 EIF2AK1Q9BQI3 630 aaKnown RBP21.43■■□□□ 1.02
LMNB1-202ENST00000395354 ZNF577Q9BSK1 485 aa21.43■■□□□ 1.02
LMNB1-202ENST00000395354 LRRC37A2A6NM11 1700 aa21.43■■□□□ 1.02
LMNB1-202ENST00000395354 A0A1B0GTH6 734 aa21.42■■□□□ 1.02
LMNB1-202ENST00000395354 RBM47A0AV96 593 aaKnown RBP21.42■■□□□ 1.02
LMNB1-202ENST00000395354 LRRC10BA6NIK2 292 aa21.42■■□□□ 1.02
LMNB1-202ENST00000395354 E9PMD0 336 aa21.42■■□□□ 1.02
LMNB1-202ENST00000395354 GAS7O60861 476 aa21.42■■□□□ 1.02
LMNB1-202ENST00000395354 TTLL4Q14679 1199 aa21.42■■□□□ 1.02
LMNB1-202ENST00000395354 PKN2Q16513 984 aaKnown RBP21.42■■□□□ 1.02
LMNB1-202ENST00000395354 TMC6Q7Z403 805 aa21.42■■□□□ 1.02
LMNB1-202ENST00000395354 LRRC8AQ8IWT6 810 aa21.42■■□□□ 1.02
LMNB1-202ENST00000395354 CCDC150Q8NCX0 1101 aa21.42■■□□□ 1.02
LMNB1-202ENST00000395354 DNAJC19Q96DA6 116 aa21.42■■□□□ 1.02
LMNB1-202ENST00000395354 TEKT3Q9BXF9 490 aa21.42■■□□□ 1.02
LMNB1-202ENST00000395354 AGO4Q9HCK5 861 aaKnown RBP21.42■■□□□ 1.02
LMNB1-202ENST00000395354 PKD2L1Q9P0L9 805 aa21.42■■□□□ 1.02
LMNB1-202ENST00000395354 LIMA1Q9UHB6 759 aaKnown RBP21.42■■□□□ 1.02
LMNB1-202ENST00000395354 ATP9AO75110 1047 aa21.41■■□□□ 1.02
LMNB1-202ENST00000395354 TXNP10599 105 aaKnown RBP21.41■■□□□ 1.02
LMNB1-202ENST00000395354 PRKAR2AP13861 404 aaKnown RBP21.41■■□□□ 1.02
LMNB1-202ENST00000395354 CCNE1P24864 410 aa21.41■■□□□ 1.02
LMNB1-202ENST00000395354 ADCYAP1R1P41586 468 aa21.41■■□□□ 1.02
LMNB1-202ENST00000395354 SLC12A3P55017 1021 aa21.41■■□□□ 1.02
LMNB1-202ENST00000395354 STK4Q13043 487 aa21.41■■□□□ 1.02
LMNB1-202ENST00000395354 IQSEC1Q6DN90 963 aa21.41■■□□□ 1.02
LMNB1-202ENST00000395354 FBXO46Q6PJ61 603 aaPredicted RBP21.41■■□□□ 1.02
LMNB1-202ENST00000395354 FOXR2Q6PJQ5 311 aa21.41■■□□□ 1.02
LMNB1-202ENST00000395354 B3GNT9Q6UX72 402 aa21.41■■□□□ 1.02
LMNB1-202ENST00000395354 FILIP1Q7Z7B0 1213 aa21.41■■□□□ 1.02
LMNB1-202ENST00000395354 SYT2Q8N9I0 419 aaPredicted RBP21.41■■□□□ 1.02
LMNB1-202ENST00000395354 TRPV1Q8NER1 839 aa21.41■■□□□ 1.02
LMNB1-202ENST00000395354 ANKRD20A12PQ8NF67 263 aa21.41■■□□□ 1.02
LMNB1-202ENST00000395354 SH3TC2Q8TF17 1288 aa21.41■■□□□ 1.02
LMNB1-202ENST00000395354 HSD17B14Q9BPX1 270 aa21.41■■□□□ 1.02
LMNB1-202ENST00000395354 THAP9Q9H5L6 903 aa21.41■■□□□ 1.02
LMNB1-202ENST00000395354 DDX41Q9UJV9 622 aaKnown RBP21.41■■□□□ 1.02
LMNB1-202ENST00000395354 IPO5O00410 1097 aaKnown RBP21.4■■□□□ 1.02
LMNB1-202ENST00000395354 ARIH2O95376 493 aa21.4■■□□□ 1.02
LMNB1-202ENST00000395354 INHAP05111 366 aa21.4■■□□□ 1.02
LMNB1-202ENST00000395354 CYBAP13498 195 aa21.4■■□□□ 1.02
LMNB1-202ENST00000395354 SP2Q02086 613 aa21.4■■□□□ 1.02
LMNB1-202ENST00000395354 NR1I3Q14994 352 aa21.4■■□□□ 1.02
LMNB1-202ENST00000395354 EPHA7Q15375 998 aa21.4■■□□□ 1.02
LMNB1-202ENST00000395354 FILIP1LQ4L180 1135 aa21.4■■□□□ 1.02
LMNB1-202ENST00000395354 MAP3K21Q5TCX8 1036 aa21.4■■□□□ 1.02
LMNB1-202ENST00000395354 CCDC62Q6P9F0 684 aa21.4■■□□□ 1.02
LMNB1-202ENST00000395354 DYMQ7RTS9 669 aa21.4■■□□□ 1.02
LMNB1-202ENST00000395354 APTXQ7Z2E3 356 aaKnown RBP21.4■■□□□ 1.02
LMNB1-202ENST00000395354 CCDC65Q8IXS2 484 aa21.4■■□□□ 1.02
LMNB1-202ENST00000395354 GUF1Q8N442 669 aaKnown RBP21.4■■□□□ 1.02
LMNB1-202ENST00000395354 NEK9Q8TD19 979 aa21.4■■□□□ 1.02
LMNB1-202ENST00000395354 CACTINQ8WUQ7 758 aaKnown RBP21.4■■□□□ 1.02
LMNB1-202ENST00000395354 P2RX5Q93086 422 aa21.4■■□□□ 1.02
LMNB1-202ENST00000395354 INTS13Q9NVM9 706 aa21.4■■□□□ 1.02
LMNB1-202ENST00000395354 MAPK8IP1Q9UQF2 711 aa21.4■■□□□ 1.02
LMNB1-202ENST00000395354 POTEFA5A3E0 1075 aa21.4■■□□□ 1.02
LMNB1-202ENST00000395354 EML1O00423 815 aa21.4■■□□□ 1.02
LMNB1-202ENST00000395354 CYP11B2P19099 503 aa21.4■■□□□ 1.02
LMNB1-202ENST00000395354 CNGA1P29973 690 aa21.4■■□□□ 1.02
LMNB1-202ENST00000395354 LY6KQ17RY6 165 aa21.4■■□□□ 1.02
LMNB1-202ENST00000395354 SLC9C1Q4G0N8 1177 aa21.4■■□□□ 1.02
LMNB1-202ENST00000395354 TTI2Q6NXR4 508 aa21.4■■□□□ 1.02
LMNB1-202ENST00000395354 POTEGQ6S5H5 508 aa21.4■■□□□ 1.02
LMNB1-202ENST00000395354 GPBP1Q86WP2 473 aa21.4■■□□□ 1.02
LMNB1-202ENST00000395354 KIAA0895Q8NCT3 520 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms