RNA–Protein interactions for RNA: ENST00000395134.3

PFDN6-205, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-205ENST00000395134 NBPF12Q5TAG4 269 aaPredicted RBP10.36□□□□□ -0.75
PFDN6-205ENST00000395134 FIGNL1Q6PIW4 674 aa10.36□□□□□ -0.75
PFDN6-205ENST00000395134 CDAN1Q8IWY9 1227 aa10.36□□□□□ -0.75
PFDN6-205ENST00000395134 GPATCH11Q8N954 259 aa10.36□□□□□ -0.75
PFDN6-205ENST00000395134 BHMTQ93088 406 aa10.36□□□□□ -0.75
PFDN6-205ENST00000395134 PLPPR2Q96GM1 343 aa10.36□□□□□ -0.75
PFDN6-205ENST00000395134 KAZALD1Q96I82 304 aa10.36□□□□□ -0.75
PFDN6-205ENST00000395134 PRMT6Q96LA8 375 aaPredicted RBP10.36□□□□□ -0.75
PFDN6-205ENST00000395134 BICC1Q9H694 974 aaKnown RBP10.36□□□□□ -0.75
PFDN6-205ENST00000395134 RCAN3Q9UKA8 241 aa10.36□□□□□ -0.75
PFDN6-205ENST00000395134 SOX13Q9UN79 622 aa10.36□□□□□ -0.75
PFDN6-205ENST00000395134 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.35□□□□□ -0.75
PFDN6-205ENST00000395134 MYO1BO43795 1136 aa10.35□□□□□ -0.75
PFDN6-205ENST00000395134 PGRP06401 933 aa10.35□□□□□ -0.75
PFDN6-205ENST00000395134 SERPINB3P29508 390 aa10.35□□□□□ -0.75
PFDN6-205ENST00000395134 RGS19P49795 217 aa10.35□□□□□ -0.75
PFDN6-205ENST00000395134 SCNN1BP51168 640 aa10.35□□□□□ -0.75
PFDN6-205ENST00000395134 PDE4BQ07343 736 aa10.35□□□□□ -0.75
PFDN6-205ENST00000395134 SREBF2Q12772 1141 aa10.35□□□□□ -0.75
PFDN6-205ENST00000395134 AP3B2Q13367 1082 aa10.35□□□□□ -0.75
PFDN6-205ENST00000395134 GRIK5Q16478 980 aa10.35□□□□□ -0.75
PFDN6-205ENST00000395134 LRRC24Q50LG9 513 aa10.35□□□□□ -0.75
PFDN6-205ENST00000395134 SPRYD7Q5W111 196 aa10.35□□□□□ -0.75
PFDN6-205ENST00000395134 ANO1Q5XXA6 986 aa10.35□□□□□ -0.75
PFDN6-205ENST00000395134 CDCA2Q69YH5 1023 aaPredicted RBP10.35□□□□□ -0.75
PFDN6-205ENST00000395134 C15orf52Q6ZUT6 534 aaKnown RBP10.35□□□□□ -0.75
PFDN6-205ENST00000395134 TOGARAM2Q6ZUX3 1019 aa10.35□□□□□ -0.75
PFDN6-205ENST00000395134 UBE2R2Q712K3 238 aaPredicted RBP10.35□□□□□ -0.75
PFDN6-205ENST00000395134 ZNF227Q86WZ6 799 aa10.35□□□□□ -0.75
PFDN6-205ENST00000395134 KLHDC4Q8TBB5 520 aa10.35□□□□□ -0.75
PFDN6-205ENST00000395134 GPBAR1Q8TDU6 330 aa10.35□□□□□ -0.75
PFDN6-205ENST00000395134 WNK4Q96J92 1243 aa10.35□□□□□ -0.75
PFDN6-205ENST00000395134 DHRS1Q96LJ7 313 aa10.35□□□□□ -0.75
PFDN6-205ENST00000395134 SLC13A1Q9BZW2 595 aa10.35□□□□□ -0.75
PFDN6-205ENST00000395134 ZHX3Q9H4I2 956 aa10.35□□□□□ -0.75
PFDN6-205ENST00000395134 CRTAC1Q9NQ79 661 aa10.35□□□□□ -0.75
PFDN6-205ENST00000395134 JADE2Q9NQC1 790 aa10.35□□□□□ -0.75
PFDN6-205ENST00000395134 ZNF69Q9UC07 566 aa10.35□□□□□ -0.75
PFDN6-205ENST00000395134 DYRK1BQ9Y463 629 aa10.35□□□□□ -0.75
PFDN6-205ENST00000395134 RANBP2P49792 3224 aaKnown RBP10.35□□□□□ -0.75
PFDN6-205ENST00000395134 ZBTB42B2RXF5 422 aa10.34□□□□□ -0.75
PFDN6-205ENST00000395134 TCP10L2B9ZVM9 353 aa10.34□□□□□ -0.75
PFDN6-205ENST00000395134 GPR25O00155 361 aa10.34□□□□□ -0.75
PFDN6-205ENST00000395134 SMNDC1O75940 238 aaKnown RBP eCLIP10.34□□□□□ -0.75
PFDN6-205ENST00000395134 PRKD3O94806 890 aa10.34□□□□□ -0.75
PFDN6-205ENST00000395134 SNUPNO95149 360 aaKnown RBP10.34□□□□□ -0.75
PFDN6-205ENST00000395134 ESRRAP11474 423 aaPredicted RBP10.34□□□□□ -0.75
PFDN6-205ENST00000395134 CCND1P24385 295 aa10.34□□□□□ -0.75
PFDN6-205ENST00000395134 HIBADHP31937 336 aaKnown RBP10.34□□□□□ -0.75
PFDN6-205ENST00000395134 ZEB1P37275 1124 aaPredicted RBP10.34□□□□□ -0.75
PFDN6-205ENST00000395134 GRIA2P42262 883 aa10.34□□□□□ -0.75
PFDN6-205ENST00000395134 PMS1P54277 932 aaKnown RBP10.34□□□□□ -0.75
PFDN6-205ENST00000395134 CACNB3P54284 484 aa10.34□□□□□ -0.75
PFDN6-205ENST00000395134 ABCB5Q2M3G0 1257 aa10.34□□□□□ -0.75
PFDN6-205ENST00000395134 METTL24Q5JXM2 366 aa10.34□□□□□ -0.75
PFDN6-205ENST00000395134 CEP135Q66GS9 1140 aa10.34□□□□□ -0.75
PFDN6-205ENST00000395134 LRFN4Q6PJG9 635 aa10.34□□□□□ -0.75
PFDN6-205ENST00000395134 HDXQ7Z353 690 aa10.34□□□□□ -0.75
PFDN6-205ENST00000395134 CPXCR1Q8N123 301 aa10.34□□□□□ -0.75
PFDN6-205ENST00000395134 CBARPQ8N350 705 aaPredicted RBP10.34□□□□□ -0.75
PFDN6-205ENST00000395134 ANKRD44Q8N8A2 993 aa10.34□□□□□ -0.75
PFDN6-205ENST00000395134 ANKRD42Q8N9B4 389 aa10.34□□□□□ -0.75
PFDN6-205ENST00000395134 TEX19Q8NA77 164 aa10.34□□□□□ -0.75
PFDN6-205ENST00000395134 CLIP3Q96DZ5 547 aa10.34□□□□□ -0.75
PFDN6-205ENST00000395134 SCLYQ96I15 445 aa10.34□□□□□ -0.75
PFDN6-205ENST00000395134 FUBP3Q96I24 572 aaKnown RBP eCLIP10.34□□□□□ -0.75
PFDN6-205ENST00000395134 PAGR1Q9BTK6 254 aa10.34□□□□□ -0.75
PFDN6-205ENST00000395134 TDRD3Q9H7E2 651 aaKnown RBP10.34□□□□□ -0.75
PFDN6-205ENST00000395134 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.34□□□□□ -0.75
PFDN6-205ENST00000395134 PCDHGC4Q9Y5F7 938 aa10.34□□□□□ -0.75
PFDN6-205ENST00000395134 DOCK2Q92608 1830 aa10.33□□□□□ -0.76
PFDN6-205ENST00000395134 DOCK3Q8IZD9 2030 aa10.33□□□□□ -0.76
PFDN6-205ENST00000395134 CHURC1-FNTBB4DL54 471 aa10.33□□□□□ -0.76
PFDN6-205ENST00000395134 K7ESF4 209 aa10.33□□□□□ -0.76
PFDN6-205ENST00000395134 IGF2BP3O00425 579 aaKnown RBP eCLIP10.33□□□□□ -0.76
PFDN6-205ENST00000395134 FRAT2O75474 233 aaPredicted RBP10.33□□□□□ -0.76
PFDN6-205ENST00000395134 GHRHP01286 108 aa10.33□□□□□ -0.76
PFDN6-205ENST00000395134 PF4V1P10720 104 aa10.33□□□□□ -0.76
PFDN6-205ENST00000395134 RAG1P15918 1043 aa10.33□□□□□ -0.76
PFDN6-205ENST00000395134 CYP2C19P33261 490 aa10.33□□□□□ -0.76
PFDN6-205ENST00000395134 TM4SF4P48230 202 aa10.33□□□□□ -0.76
PFDN6-205ENST00000395134 TNP2Q05952 138 aa10.33□□□□□ -0.76
PFDN6-205ENST00000395134 GTF2H3Q13889 308 aa10.33□□□□□ -0.76
PFDN6-205ENST00000395134 LBRQ14739 615 aaKnown RBP10.33□□□□□ -0.76
PFDN6-205ENST00000395134 CCDC70Q6NSX1 233 aa10.33□□□□□ -0.76
PFDN6-205ENST00000395134 HFE2Q6ZVN8 426 aa10.33□□□□□ -0.76
PFDN6-205ENST00000395134 SSH1Q8WYL5 1049 aa10.33□□□□□ -0.76
PFDN6-205ENST00000395134 PPP1R14AQ96A00 147 aa10.33□□□□□ -0.76
PFDN6-205ENST00000395134 FAM84BQ96KN1 310 aaPredicted RBP10.33□□□□□ -0.76
PFDN6-205ENST00000395134 HERPUD2Q9BSE4 406 aa10.33□□□□□ -0.76
PFDN6-205ENST00000395134 LUZP4Q9P127 313 aa10.33□□□□□ -0.76
PFDN6-205ENST00000395134 KLHL3Q9UH77 587 aa10.33□□□□□ -0.76
PFDN6-205ENST00000395134 ZBTB21Q9ULJ3 1066 aa10.33□□□□□ -0.76
PFDN6-205ENST00000395134 FAM205AQ6ZU69 1335 aa10.33□□□□□ -0.76
PFDN6-205ENST00000395134 ZNF521Q96K83 1311 aa10.33□□□□□ -0.76
PFDN6-205ENST00000395134 RBBP6Q7Z6E9 1792 aaKnown RBP10.32□□□□□ -0.76
PFDN6-205ENST00000395134 DCDC2BA2VCK2 349 aa10.32□□□□□ -0.76
PFDN6-205ENST00000395134 CFAP69A5D8W1 941 aa10.32□□□□□ -0.76
PFDN6-205ENST00000395134 ERC2O15083 957 aa10.32□□□□□ -0.76
PFDN6-205ENST00000395134 FKTNO75072 461 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms