RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 ZNF543Q08ER8 600 aa12.7□□□□□ -0.38
UBE2D3-209ENST00000394804 BIRC3Q13489 604 aa12.7□□□□□ -0.38
UBE2D3-209ENST00000394804 NAB2Q15742 525 aa12.7□□□□□ -0.38
UBE2D3-209ENST00000394804 LRCH2Q5VUJ6 765 aa12.7□□□□□ -0.38
UBE2D3-209ENST00000394804 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.7□□□□□ -0.38
UBE2D3-209ENST00000394804 DDX47Q9H0S4 455 aaKnown RBP12.7□□□□□ -0.38
UBE2D3-209ENST00000394804 DDX39AO00148 427 aaKnown RBP12.7□□□□□ -0.38
UBE2D3-209ENST00000394804 CYTH3O43739 400 aa12.7□□□□□ -0.38
UBE2D3-209ENST00000394804 SLC37A4O43826 429 aa12.7□□□□□ -0.38
UBE2D3-209ENST00000394804 FECHP22830 423 aa12.7□□□□□ -0.38
UBE2D3-209ENST00000394804 GBP1P32455 592 aa12.7□□□□□ -0.38
UBE2D3-209ENST00000394804 ARMC9Q7Z3E5 817 aa12.7□□□□□ -0.38
UBE2D3-209ENST00000394804 KIAA0825Q8IV33 1275 aa12.7□□□□□ -0.38
UBE2D3-209ENST00000394804 KRT14P02533 472 aa12.69□□□□□ -0.38
UBE2D3-209ENST00000394804 GPSM2P81274 684 aa12.69□□□□□ -0.38
UBE2D3-209ENST00000394804 ARHGAP4P98171 946 aa12.69□□□□□ -0.38
UBE2D3-209ENST00000394804 FRMD5Q7Z6J6 570 aa12.69□□□□□ -0.38
UBE2D3-209ENST00000394804 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.69□□□□□ -0.385e-7■■■■□ 24.9
UBE2D3-209ENST00000394804 TYW1Q9NV66 732 aaKnown RBP12.69□□□□□ -0.38
UBE2D3-209ENST00000394804 LARSQ9P2J5 1176 aaKnown RBP12.69□□□□□ -0.38
UBE2D3-209ENST00000394804 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.69□□□□□ -0.38
UBE2D3-209ENST00000394804 EIF3BP55884 814 aaKnown RBP12.69□□□□□ -0.38
UBE2D3-209ENST00000394804 MAGOHBQ96A72 148 aaKnown RBP12.69□□□□□ -0.38
UBE2D3-209ENST00000394804 GPR75-ASB3A0A0A6YYF3 556 aa12.69□□□□□ -0.38
UBE2D3-209ENST00000394804 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.69□□□□□ -0.38
UBE2D3-209ENST00000394804 PPEF1O14829 653 aaPredicted RBP12.69□□□□□ -0.38
UBE2D3-209ENST00000394804 PPP1R37O75864 691 aa12.69□□□□□ -0.38
UBE2D3-209ENST00000394804 FGGP02679 453 aa12.69□□□□□ -0.38
UBE2D3-209ENST00000394804 EEF2P13639 858 aaKnown RBP12.69□□□□□ -0.38
UBE2D3-209ENST00000394804 GJC1P36383 396 aa12.69□□□□□ -0.38
UBE2D3-209ENST00000394804 USP11P51784 963 aa12.69□□□□□ -0.38
UBE2D3-209ENST00000394804 ABCB5Q2M3G0 1257 aa12.69□□□□□ -0.38
UBE2D3-209ENST00000394804 QRICH1Q2TAL8 776 aa12.69□□□□□ -0.38
UBE2D3-209ENST00000394804 EDRF1Q3B7T1 1238 aa12.69□□□□□ -0.38
UBE2D3-209ENST00000394804 RC3H1Q5TC82 1133 aaKnown RBP12.69□□□□□ -0.38
UBE2D3-209ENST00000394804 PAIP2Q9BPZ3 127 aaKnown RBP12.69□□□□□ -0.38
UBE2D3-209ENST00000394804 COA1Q9GZY4 146 aa12.69□□□□□ -0.38
UBE2D3-209ENST00000394804 PARVGQ9HBI0 331 aa12.69□□□□□ -0.38
UBE2D3-209ENST00000394804 NKIRAS1Q9NYS0 192 aa12.69□□□□□ -0.38
UBE2D3-209ENST00000394804 K7ENM7 598 aa12.68□□□□□ -0.38
UBE2D3-209ENST00000394804 FANCGO15287 622 aa12.68□□□□□ -0.38
UBE2D3-209ENST00000394804 KRT5P13647 590 aa12.68□□□□□ -0.38
UBE2D3-209ENST00000394804 STAT3P40763 770 aa12.68□□□□□ -0.38
UBE2D3-209ENST00000394804 PLTPP55058 493 aa12.68□□□□□ -0.38
UBE2D3-209ENST00000394804 PPP4R3AQ6IN85 833 aa12.68□□□□□ -0.38
UBE2D3-209ENST00000394804 TTBK2Q6IQ55 1244 aa12.68□□□□□ -0.38
UBE2D3-209ENST00000394804 GSTA5Q7RTV2 222 aa12.68□□□□□ -0.38
UBE2D3-209ENST00000394804 C4orf32Q8N8J7 132 aa12.68□□□□□ -0.38
UBE2D3-209ENST00000394804 CNOT10Q9H9A5 744 aaKnown RBP12.68□□□□□ -0.38
UBE2D3-209ENST00000394804 NOC2LQ9Y3T9 749 aaKnown RBP12.68□□□□□ -0.38
UBE2D3-209ENST00000394804 CNTNAP4Q9C0A0 1308 aa12.68□□□□□ -0.38
UBE2D3-209ENST00000394804 PDE2AO00408 941 aaPredicted RBP12.68□□□□□ -0.38
UBE2D3-209ENST00000394804 LRRN2O75325 713 aa12.68□□□□□ -0.38
UBE2D3-209ENST00000394804 POLR2MP0CAP2 368 aa12.68□□□□□ -0.38
UBE2D3-209ENST00000394804 HSPA6P17066 643 aa12.68□□□□□ -0.38
UBE2D3-209ENST00000394804 CTNNA2P26232 953 aa12.68□□□□□ -0.38
UBE2D3-209ENST00000394804 NFIXQ14938 502 aa12.68□□□□□ -0.38
UBE2D3-209ENST00000394804 NPY5RQ15761 445 aa12.68□□□□□ -0.38
UBE2D3-209ENST00000394804 FAM20AQ96MK3 541 aa12.68□□□□□ -0.38
UBE2D3-209ENST00000394804 HOMER3Q9NSC5 361 aa12.68□□□□□ -0.38
UBE2D3-209ENST00000394804 EXOC7Q9UPT5 735 aa12.68□□□□□ -0.38
UBE2D3-209ENST00000394804 PKD1L3Q7Z443 1732 aa12.68□□□□□ -0.38
UBE2D3-209ENST00000394804 GUCY1A3Q02108 690 aa12.68□□□□□ -0.38
UBE2D3-209ENST00000394804 EVX2Q03828 476 aa12.68□□□□□ -0.38
UBE2D3-209ENST00000394804 SF3A3Q12874 501 aaKnown RBP eCLIP12.68□□□□□ -0.382e-8■□□□□ 10.5
UBE2D3-209ENST00000394804 CREG2Q8IUH2 290 aa12.68□□□□□ -0.38
UBE2D3-209ENST00000394804 CLEC10AQ8IUN9 316 aa12.68□□□□□ -0.38
UBE2D3-209ENST00000394804 OGFOD1Q8N543 542 aa12.68□□□□□ -0.38
UBE2D3-209ENST00000394804 DCAF4Q8WV16 495 aa12.68□□□□□ -0.38
UBE2D3-209ENST00000394804 SLITRK6Q9H5Y7 841 aa12.68□□□□□ -0.38
UBE2D3-209ENST00000394804 WNK3Q9BYP7 1800 aa12.68□□□□□ -0.38
UBE2D3-209ENST00000394804 LAMB4A4D0S4 1761 aa12.67□□□□□ -0.38
UBE2D3-209ENST00000394804 NPHP3-ACAD11A0A0J9YXS1 232 aa12.67□□□□□ -0.38
UBE2D3-209ENST00000394804 RCCD1A6NED2 376 aa12.67□□□□□ -0.38
UBE2D3-209ENST00000394804 MAP2K2P36507 400 aa12.67□□□□□ -0.38
UBE2D3-209ENST00000394804 SMTNP53814 917 aa12.67□□□□□ -0.38
UBE2D3-209ENST00000394804 UHMK1Q8TAS1 419 aaKnown RBP12.67□□□□□ -0.38
UBE2D3-209ENST00000394804 NEK9Q8TD19 979 aa12.67□□□□□ -0.38
UBE2D3-209ENST00000394804 VTI1AQ96AJ9 217 aa12.67□□□□□ -0.38
UBE2D3-209ENST00000394804 ACTR5Q9H9F9 607 aaPredicted RBP12.67□□□□□ -0.38
UBE2D3-209ENST00000394804 LAMA4Q16363 1823 aa12.67□□□□□ -0.38
UBE2D3-209ENST00000394804 CTNND1O60716 968 aaKnown RBP12.67□□□□□ -0.38
UBE2D3-209ENST00000394804 UCHL3P15374 230 aa12.67□□□□□ -0.38
UBE2D3-209ENST00000394804 ALDH1B1P30837 517 aa12.67□□□□□ -0.38
UBE2D3-209ENST00000394804 DR1Q01658 176 aa12.67□□□□□ -0.38
UBE2D3-209ENST00000394804 SYDE2Q5VT97 1194 aa12.67□□□□□ -0.38
UBE2D3-209ENST00000394804 NLRP14Q86W24 1093 aa12.67□□□□□ -0.38
UBE2D3-209ENST00000394804 AENQ8WTP8 325 aaKnown RBP12.67□□□□□ -0.38
UBE2D3-209ENST00000394804 CHURC1Q8WUH1 139 aa12.67□□□□□ -0.38
UBE2D3-209ENST00000394804 DAGLAQ9Y4D2 1042 aa12.67□□□□□ -0.38
UBE2D3-209ENST00000394804 A0A087X0T9 212 aa12.67□□□□□ -0.38
UBE2D3-209ENST00000394804 PDXKO00764 312 aa12.67□□□□□ -0.38
UBE2D3-209ENST00000394804 RAD51CO43502 376 aa12.67□□□□□ -0.38
UBE2D3-209ENST00000394804 FAM228BP0C875 321 aa12.67□□□□□ -0.38
UBE2D3-209ENST00000394804 BMP3P12645 472 aa12.67□□□□□ -0.38
UBE2D3-209ENST00000394804 ANXA13P27216 316 aa12.67□□□□□ -0.38
UBE2D3-209ENST00000394804 MESDQ14696 234 aa12.67□□□□□ -0.38
UBE2D3-209ENST00000394804 ZYXQ15942 572 aaKnown RBP12.67□□□□□ -0.38
UBE2D3-209ENST00000394804 ZNF365Q70YC5 407 aa12.67□□□□□ -0.38
UBE2D3-209ENST00000394804 USP38Q8NB14 1042 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms