RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 MFSD10Q14728 455 aa14.86□□□□□ -0.03
USP44-202ENST00000393091 GJA10Q969M2 543 aa14.86□□□□□ -0.03
USP44-202ENST00000393091 DYDC2Q96IM9 177 aa14.86□□□□□ -0.03
USP44-202ENST00000393091 H3BRB1 525 aa14.86□□□□□ -0.03
USP44-202ENST00000393091 PTMSP20962 102 aa14.86□□□□□ -0.03
USP44-202ENST00000393091 RFC5P40937 340 aa14.86□□□□□ -0.03
USP44-202ENST00000393091 ECM1Q16610 540 aa14.86□□□□□ -0.03
USP44-202ENST00000393091 NCAPH2Q6IBW4 605 aa14.86□□□□□ -0.03
USP44-202ENST00000393091 CABP7Q86V35 215 aa14.86□□□□□ -0.03
USP44-202ENST00000393091 SYMPKQ92797 1274 aaKnown RBP14.86□□□□□ -0.03
USP44-202ENST00000393091 LXNQ9BS40 222 aa14.86□□□□□ -0.03
USP44-202ENST00000393091 TUT1Q9H6E5 874 aaKnown RBP14.86□□□□□ -0.03
USP44-202ENST00000393091 AZI2Q9H6S1 392 aa14.86□□□□□ -0.03
USP44-202ENST00000393091 MYH11P35749 1972 aa14.86□□□□□ -0.03
USP44-202ENST00000393091 KAT6AQ92794 2004 aa14.86□□□□□ -0.03
USP44-202ENST00000393091 MYL1P05976 194 aa14.85□□□□□ -0.03
USP44-202ENST00000393091 GNASQ5JWF2 1037 aa14.85□□□□□ -0.03
USP44-202ENST00000393091 TMEM106CQ9BVX2 250 aa14.85□□□□□ -0.03
USP44-202ENST00000393091 NRBP2Q9NSY0 501 aa14.85□□□□□ -0.03
USP44-202ENST00000393091 MROH7Q68CQ1 1323 aa14.85□□□□□ -0.03
USP44-202ENST00000393091 PCNTO95613 3336 aa14.85□□□□□ -0.03
USP44-202ENST00000393091 PGK1P00558 417 aa14.85□□□□□ -0.03
USP44-202ENST00000393091 CD4P01730 458 aa14.85□□□□□ -0.03
USP44-202ENST00000393091 C6orf222P0C671 652 aaPredicted RBP14.85□□□□□ -0.03
USP44-202ENST00000393091 ATP2B1P20020 1258 aa14.85□□□□□ -0.03
USP44-202ENST00000393091 SCP2P22307 547 aa14.85□□□□□ -0.03
USP44-202ENST00000393091 UBE2HP62256 183 aa14.85□□□□□ -0.03
USP44-202ENST00000393091 NAALADL2Q58DX5 795 aa14.85□□□□□ -0.03
USP44-202ENST00000393091 COL13A1Q5TAT6 717 aaPredicted RBP14.85□□□□□ -0.03
USP44-202ENST00000393091 SWSAP1Q6NVH7 229 aa14.85□□□□□ -0.03
USP44-202ENST00000393091 SH3RF1Q7Z6J0 888 aa14.85□□□□□ -0.03
USP44-202ENST00000393091 GABBR1Q9UBS5 961 aa14.85□□□□□ -0.03
USP44-202ENST00000393091 GTF2IRD1Q9UHL9 959 aa14.85□□□□□ -0.03
USP44-202ENST00000393091 RTP1P59025 263 aa14.85□□□□□ -0.03
USP44-202ENST00000393091 PDXDC2PQ6P474 469 aa14.85□□□□□ -0.03
USP44-202ENST00000393091 ANO5Q75V66 913 aa14.85□□□□□ -0.03
USP44-202ENST00000393091 OTUD6AQ7L8S5 288 aa14.85□□□□□ -0.03
USP44-202ENST00000393091 SYT2Q8N9I0 419 aaPredicted RBP14.85□□□□□ -0.03
USP44-202ENST00000393091 ABHD8Q96I13 439 aa14.85□□□□□ -0.03
USP44-202ENST00000393091 BLOC1S4Q9NUP1 217 aa14.85□□□□□ -0.03
USP44-202ENST00000393091 CCDC39Q9UFE4 941 aa14.85□□□□□ -0.03
USP44-202ENST00000393091 MARCH6O60337 910 aa14.84□□□□□ -0.03
USP44-202ENST00000393091 ECM2O94769 699 aaPredicted RBP14.84□□□□□ -0.03
USP44-202ENST00000393091 MARCKSP29966 332 aaPredicted RBP14.84□□□□□ -0.03
USP44-202ENST00000393091 SLC12A3P55017 1021 aa14.84□□□□□ -0.03
USP44-202ENST00000393091 MARCH8Q5T0T0 291 aa14.84□□□□□ -0.03
USP44-202ENST00000393091 CLIC6Q96NY7 704 aa14.84□□□□□ -0.03
USP44-202ENST00000393091 DHX33Q9H6R0 707 aaKnown RBP14.84□□□□□ -0.03
USP44-202ENST00000393091 LMBRD1Q9NUN5 540 aa14.84□□□□□ -0.03
USP44-202ENST00000393091 KBTBD4Q9NVX7 518 aa14.84□□□□□ -0.03
USP44-202ENST00000393091 ARVCFO00192 962 aa14.84□□□□□ -0.03
USP44-202ENST00000393091 PRKCEQ02156 737 aa14.84□□□□□ -0.03
USP44-202ENST00000393091 POU5F1BQ06416 359 aa14.84□□□□□ -0.03
USP44-202ENST00000393091 FAM26DQ5JW98 314 aa14.84□□□□□ -0.03
USP44-202ENST00000393091 CCDC73Q6ZRK6 1079 aa14.84□□□□□ -0.03
USP44-202ENST00000393091 SNX29Q8TEQ0 813 aa14.84□□□□□ -0.03
USP44-202ENST00000393091 LRRC15Q8TF66 581 aa14.84□□□□□ -0.03
USP44-202ENST00000393091 RAD54LQ92698 747 aa14.84□□□□□ -0.03
USP44-202ENST00000393091 CTAGE1Q96RT6 745 aa14.84□□□□□ -0.03
USP44-202ENST00000393091 MAFO75444 373 aaPredicted RBP14.83□□□□□ -0.03
USP44-202ENST00000393091 PTGS1P23219 599 aa14.83□□□□□ -0.03
USP44-202ENST00000393091 GUCY2CP25092 1073 aa14.83□□□□□ -0.03
USP44-202ENST00000393091 TXLNAP40222 546 aa14.83□□□□□ -0.03
USP44-202ENST00000393091 BEX3Q00994 111 aa14.83□□□□□ -0.03
USP44-202ENST00000393091 SNW1Q13573 536 aaKnown RBP14.83□□□□□ -0.03
USP44-202ENST00000393091 FMR1NBQ8N0W7 255 aaPredicted RBP14.83□□□□□ -0.03
USP44-202ENST00000393091 MRPS27Q92552 414 aaKnown RBP14.83□□□□□ -0.03
USP44-202ENST00000393091 CALML4Q96GE6 196 aa14.83□□□□□ -0.03
USP44-202ENST00000393091 FAM13BQ9NYF5 915 aa14.83□□□□□ -0.03
USP44-202ENST00000393091 PCDHA2Q9Y5H9 948 aa14.83□□□□□ -0.03
USP44-202ENST00000393091 MAGEB2O15479 319 aa14.83□□□□□ -0.04
USP44-202ENST00000393091 YWHABP31946 246 aaKnown RBP14.83□□□□□ -0.04
USP44-202ENST00000393091 CCT6AP40227 531 aaKnown RBP14.83□□□□□ -0.04
USP44-202ENST00000393091 FOXD4L5Q5VV16 416 aaPredicted RBP14.83□□□□□ -0.04
USP44-202ENST00000393091 FOXD4L4Q8WXT5 416 aaPredicted RBP14.83□□□□□ -0.04
USP44-202ENST00000393091 EPSTI1Q96J88 318 aa14.83□□□□□ -0.04
USP44-202ENST00000393091 JPH2Q9BR39 696 aaPredicted RBP14.83□□□□□ -0.04
USP44-202ENST00000393091 TNMDQ9H2S6 317 aa14.83□□□□□ -0.04
USP44-202ENST00000393091 RNPEPQ9H4A4 650 aa14.83□□□□□ -0.04
USP44-202ENST00000393091 A0A087X0B3 334 aa14.83□□□□□ -0.04
USP44-202ENST00000393091 POTEB3A0JP26 581 aa14.83□□□□□ -0.04
USP44-202ENST00000393091 SMIM10L2AP0DMW4 78 aa14.83□□□□□ -0.04
USP44-202ENST00000393091 SMIM10L2BP0DMW5 78 aa14.83□□□□□ -0.04
USP44-202ENST00000393091 GNAT1P11488 350 aa14.83□□□□□ -0.04
USP44-202ENST00000393091 ME1P48163 572 aa14.83□□□□□ -0.04
USP44-202ENST00000393091 RARRES1P49788 294 aa14.83□□□□□ -0.04
USP44-202ENST00000393091 POTEBQ6S5H4 581 aa14.83□□□□□ -0.04
USP44-202ENST00000393091 SLC39A5Q6ZMH5 540 aa14.83□□□□□ -0.04
USP44-202ENST00000393091 C11orf49Q9H6J7 331 aa14.83□□□□□ -0.04
USP44-202ENST00000393091 FRMD3A2A2Y4 597 aa14.82□□□□□ -0.04
USP44-202ENST00000393091 ACTN4O43707 911 aaKnown RBP14.82□□□□□ -0.04
USP44-202ENST00000393091 C22orf31O95567 290 aa14.82□□□□□ -0.04
USP44-202ENST00000393091 UBA7P41226 1012 aa14.82□□□□□ -0.04
USP44-202ENST00000393091 LRRC27Q9C0I9 530 aa14.82□□□□□ -0.04
USP44-202ENST00000393091 CYP26B1Q9NR63 512 aa14.82□□□□□ -0.04
USP44-202ENST00000393091 RGL1Q9NZL6 768 aa14.82□□□□□ -0.04
USP44-202ENST00000393091 PKD2L1Q9P0L9 805 aa14.82□□□□□ -0.04
USP44-202ENST00000393091 TRIP12Q14669 1992 aaPredicted RBP14.82□□□□□ -0.04
USP44-202ENST00000393091 SMIM35A0A1B0GVV1 85 aa14.82□□□□□ -0.04
USP44-202ENST00000393091 DDX39AO00148 427 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms