RNA–Protein interactions for RNA: ENST00000392745.6

TRAF3-203, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 2,459 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-203ENST00000392745 LMNB1P20700 586 aa20.19■□□□□ 0.82
TRAF3-203ENST00000392745 GNGT1P63211 74 aa20.19■□□□□ 0.82
TRAF3-203ENST00000392745 DYMQ7RTS9 669 aa20.19■□□□□ 0.82
TRAF3-203ENST00000392745 PSMB7Q99436 277 aa20.19■□□□□ 0.82
TRAF3-203ENST00000392745 EHD2Q9NZN4 543 aa20.19■□□□□ 0.82
TRAF3-203ENST00000392745 MRPL11Q9Y3B7 192 aaKnown RBP20.19■□□□□ 0.82
TRAF3-203ENST00000392745 WDR46O15213 610 aaKnown RBP20.18■□□□□ 0.82
TRAF3-203ENST00000392745 MSH4O15457 936 aa20.18■□□□□ 0.82
TRAF3-203ENST00000392745 SEMA3FQ13275 785 aa20.18■□□□□ 0.82
TRAF3-203ENST00000392745 HYIQ5T013 277 aa20.18■□□□□ 0.82
TRAF3-203ENST00000392745 GPC2Q8N158 579 aa20.18■□□□□ 0.82
TRAF3-203ENST00000392745 PRPF38AQ8NAV1 312 aaKnown RBP20.18■□□□□ 0.82
TRAF3-203ENST00000392745 TSEN2Q8NCE0 465 aaKnown RBP20.18■□□□□ 0.82
TRAF3-203ENST00000392745 LPAR1Q92633 364 aa20.18■□□□□ 0.82
TRAF3-203ENST00000392745 FHDC1Q9C0D6 1143 aaPredicted RBP20.18■□□□□ 0.82
TRAF3-203ENST00000392745 SPON1Q9HCB6 807 aa20.18■□□□□ 0.82
TRAF3-203ENST00000392745 EMILIN3Q9NT22 766 aa20.18■□□□□ 0.82
TRAF3-203ENST00000392745 MYH10P35580 1976 aa20.18■□□□□ 0.82
TRAF3-203ENST00000392745 TBX3O15119 743 aa20.18■□□□□ 0.82
TRAF3-203ENST00000392745 EIF3HO15372 352 aaKnown RBP eCLIP20.18■□□□□ 0.82
TRAF3-203ENST00000392745 ERLIN2O94905 339 aa20.18■□□□□ 0.82
TRAF3-203ENST00000392745 CXCR5P32302 372 aa20.18■□□□□ 0.82
TRAF3-203ENST00000392745 MTMR2Q13614 643 aa20.18■□□□□ 0.82
TRAF3-203ENST00000392745 CCDC70Q6NSX1 233 aa20.18■□□□□ 0.82
TRAF3-203ENST00000392745 GPIHBP1Q8IV16 184 aa20.18■□□□□ 0.82
TRAF3-203ENST00000392745 SPATA4Q8NEY3 305 aa20.18■□□□□ 0.82
TRAF3-203ENST00000392745 CNOT6LQ96LI5 555 aaKnown RBP20.18■□□□□ 0.82
TRAF3-203ENST00000392745 SH3GL2Q99962 352 aa20.18■□□□□ 0.82
TRAF3-203ENST00000392745 NUP58Q9BVL2 599 aa20.18■□□□□ 0.82
TRAF3-203ENST00000392745 GINM1Q9NU53 330 aa20.18■□□□□ 0.82
TRAF3-203ENST00000392745 ZNF112Q9UJU3 913 aa20.18■□□□□ 0.82
TRAF3-203ENST00000392745 MOCS3O95396 460 aa20.17■□□□□ 0.82
TRAF3-203ENST00000392745 MIIPQ5JXC2 388 aa20.17■□□□□ 0.82
TRAF3-203ENST00000392745 ARL8AQ96BM9 186 aa20.17■□□□□ 0.82
TRAF3-203ENST00000392745 CCDC42Q96M95 316 aa20.17■□□□□ 0.82
TRAF3-203ENST00000392745 KIAA1024Q9UPX6 916 aa20.17■□□□□ 0.82
TRAF3-203ENST00000392745 IGLV3-22A0A075B6J6 115 aa20.17■□□□□ 0.82
TRAF3-203ENST00000392745 UBXN2AP68543 259 aa20.17■□□□□ 0.82
TRAF3-203ENST00000392745 SPP2Q13103 211 aa20.17■□□□□ 0.82
TRAF3-203ENST00000392745 FKBP15Q5T1M5 1219 aa20.17■□□□□ 0.82
TRAF3-203ENST00000392745 DCAF15Q66K64 600 aa20.17■□□□□ 0.82
TRAF3-203ENST00000392745 ANKRD40Q6AI12 368 aa20.17■□□□□ 0.82
TRAF3-203ENST00000392745 NFRKBQ6P4R8 1299 aa20.17■□□□□ 0.82
TRAF3-203ENST00000392745 MMS22LQ6ZRQ5 1243 aa20.17■□□□□ 0.82
TRAF3-203ENST00000392745 RETREG2Q8NC44 543 aa20.17■□□□□ 0.82
TRAF3-203ENST00000392745 FAM107BQ9H098 131 aa20.17■□□□□ 0.82
TRAF3-203ENST00000392745 GGA3Q9NZ52 723 aa20.17■□□□□ 0.82
TRAF3-203ENST00000392745 SAMM50Q9Y512 469 aa20.17■□□□□ 0.82
TRAF3-203ENST00000392745 ABCB11O95342 1321 aa20.17■□□□□ 0.82
TRAF3-203ENST00000392745 DOCK1Q14185 1865 aa20.16■□□□□ 0.82
TRAF3-203ENST00000392745 POTEB3A0JP26 581 aa20.16■□□□□ 0.82
TRAF3-203ENST00000392745 POTECB2RU33 542 aa20.16■□□□□ 0.82
TRAF3-203ENST00000392745 E9PMD0 336 aa20.16■□□□□ 0.82
TRAF3-203ENST00000392745 MED24O75448 989 aa20.16■□□□□ 0.82
TRAF3-203ENST00000392745 ICAM1P05362 532 aa20.16■□□□□ 0.82
TRAF3-203ENST00000392745 ZNF76P36508 570 aa20.16■□□□□ 0.82
TRAF3-203ENST00000392745 TTMPQ5BVD1 217 aa20.16■□□□□ 0.82
TRAF3-203ENST00000392745 POTEBQ6S5H4 581 aa20.16■□□□□ 0.82
TRAF3-203ENST00000392745 APOBEC3FQ8IUX4 373 aaKnown RBP20.16■□□□□ 0.82
TRAF3-203ENST00000392745 KIAA0895Q8NCT3 520 aa20.16■□□□□ 0.82
TRAF3-203ENST00000392745 TRIM58Q8NG06 486 aa20.16■□□□□ 0.82
TRAF3-203ENST00000392745 DDX12PQ92771 950 aa20.16■□□□□ 0.82
TRAF3-203ENST00000392745 YY1AP1Q9H869 796 aa20.16■□□□□ 0.82
TRAF3-203ENST00000392745 CCPG1Q9ULG6 757 aa20.16■□□□□ 0.82
TRAF3-203ENST00000392745 VCAM1P19320 739 aa20.16■□□□□ 0.82
TRAF3-203ENST00000392745 MTIF2P46199 727 aaKnown RBP20.16■□□□□ 0.82
TRAF3-203ENST00000392745 SPA17Q15506 151 aa20.16■□□□□ 0.82
TRAF3-203ENST00000392745 SCYL3Q8IZE3 742 aa20.16■□□□□ 0.82
TRAF3-203ENST00000392745 FAM20AQ96MK3 541 aa20.16■□□□□ 0.82
TRAF3-203ENST00000392745 WRNIP1Q96S55 665 aa20.16■□□□□ 0.82
TRAF3-203ENST00000392745 NOC4LQ9BVI4 516 aaKnown RBP20.16■□□□□ 0.82
TRAF3-203ENST00000392745 DEF6Q9H4E7 631 aa20.16■□□□□ 0.82
TRAF3-203ENST00000392745 GOLGA8KD6RF30 607 aa20.15■□□□□ 0.82
TRAF3-203ENST00000392745 SLC30A10Q6XR72 485 aa20.15■□□□□ 0.82
TRAF3-203ENST00000392745 UNC13DQ70J99 1090 aa20.15■□□□□ 0.82
TRAF3-203ENST00000392745 TEX2Q8IWB9 1127 aa20.15■□□□□ 0.82
TRAF3-203ENST00000392745 SUGP1Q8IWZ8 645 aaKnown RBP20.15■□□□□ 0.82
TRAF3-203ENST00000392745 P2RX5Q93086 422 aa20.15■□□□□ 0.82
TRAF3-203ENST00000392745 CCDC47Q96A33 483 aaKnown RBP20.15■□□□□ 0.82
TRAF3-203ENST00000392745 OSBPL9Q96SU4 736 aa20.15■□□□□ 0.82
TRAF3-203ENST00000392745 WDR18Q9BV38 432 aa20.15■□□□□ 0.82
TRAF3-203ENST00000392745 IFIH1Q9BYX4 1025 aaKnown RBP20.15■□□□□ 0.82
TRAF3-203ENST00000392745 TSGA10Q9BZW7 698 aa20.15■□□□□ 0.82
TRAF3-203ENST00000392745 TANGO6Q9C0B7 1094 aa20.15■□□□□ 0.82
TRAF3-203ENST00000392745 NT5C3AQ9H0P0 336 aa20.15■□□□□ 0.82
TRAF3-203ENST00000392745 SLC39A2Q9NP94 309 aa20.15■□□□□ 0.82
TRAF3-203ENST00000392745 PVALEFA0A1B0GWK0 134 aa20.15■□□□□ 0.82
TRAF3-203ENST00000392745 TACC1O75410 805 aa20.15■□□□□ 0.82
TRAF3-203ENST00000392745 CATSPER3Q86XQ3 398 aa20.15■□□□□ 0.82
TRAF3-203ENST00000392745 CPXCR1Q8N123 301 aa20.15■□□□□ 0.82
TRAF3-203ENST00000392745 NOC3LQ8WTT2 800 aaKnown RBP20.15■□□□□ 0.82
TRAF3-203ENST00000392745 HOOK2Q96ED9 719 aa20.15■□□□□ 0.82
TRAF3-203ENST00000392745 DHTKD1Q96HY7 919 aaPredicted RBP20.15■□□□□ 0.82
TRAF3-203ENST00000392745 ARHGAP20Q9P2F6 1191 aa20.15■□□□□ 0.82
TRAF3-203ENST00000392745 PCDHA13Q9Y5I0 950 aa20.15■□□□□ 0.82
TRAF3-203ENST00000392745 EPHB6O15197 1021 aa20.14■□□□□ 0.82
TRAF3-203ENST00000392745 PTPRAP18433 802 aa20.14■□□□□ 0.82
TRAF3-203ENST00000392745 FBXW10Q5XX13 1052 aa20.14■□□□□ 0.82
TRAF3-203ENST00000392745 HAUS3Q68CZ6 603 aa20.14■□□□□ 0.82
TRAF3-203ENST00000392745 GBP6Q6ZN66 633 aa20.14■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms