RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 ADAMTS1Q9UHI8 967 aa12.84□□□□□ -0.35
RAPGEF3-201ENST00000389212 CHMP2AO43633 222 aa12.83□□□□□ -0.36
RAPGEF3-201ENST00000389212 SYF2O95926 243 aaKnown RBP12.83□□□□□ -0.36
RAPGEF3-201ENST00000389212 DCAF17Q5H9S7 520 aaPredicted RBP12.83□□□□□ -0.36
RAPGEF3-201ENST00000389212 ARMCX6Q7L4S7 300 aa12.83□□□□□ -0.36
RAPGEF3-201ENST00000389212 KAT2BQ92831 832 aa12.83□□□□□ -0.36
RAPGEF3-201ENST00000389212 NT5C3AQ9H0P0 336 aa12.83□□□□□ -0.36
RAPGEF3-201ENST00000389212 DHX36Q9H2U1 1008 aaKnown RBP12.83□□□□□ -0.36
RAPGEF3-201ENST00000389212 QTRT2Q9H974 415 aaKnown RBP12.83□□□□□ -0.36
RAPGEF3-201ENST00000389212 KCNMB3Q9NPA1 279 aa12.83□□□□□ -0.36
RAPGEF3-201ENST00000389212 A0A087X0T9 212 aa12.83□□□□□ -0.36
RAPGEF3-201ENST00000389212 CLIC2O15247 247 aa12.83□□□□□ -0.36
RAPGEF3-201ENST00000389212 NDUFB10O96000 172 aa12.83□□□□□ -0.36
RAPGEF3-201ENST00000389212 FAM228BP0C875 321 aa12.83□□□□□ -0.36
RAPGEF3-201ENST00000389212 GCFC2P16383 781 aaKnown RBP12.83□□□□□ -0.36
RAPGEF3-201ENST00000389212 SLC9A1P19634 815 aa12.83□□□□□ -0.36
RAPGEF3-201ENST00000389212 POLD1P28340 1107 aa12.83□□□□□ -0.36
RAPGEF3-201ENST00000389212 GGCXP38435 758 aa12.83□□□□□ -0.36
RAPGEF3-201ENST00000389212 TUBB4BP68371 445 aa12.83□□□□□ -0.36
RAPGEF3-201ENST00000389212 RRP1BQ14684 758 aaKnown RBP12.83□□□□□ -0.36
RAPGEF3-201ENST00000389212 ASTE1Q2TB18 679 aaPredicted RBP12.83□□□□□ -0.36
RAPGEF3-201ENST00000389212 TCERG1LQ5VWI1 586 aa12.83□□□□□ -0.36
RAPGEF3-201ENST00000389212 HHIPL2Q6UWX4 724 aa12.83□□□□□ -0.36
RAPGEF3-201ENST00000389212 SND1Q7KZF4 910 aaKnown RBP eCLIP12.83□□□□□ -0.36
RAPGEF3-201ENST00000389212 ALS2CR12Q96Q35 445 aa12.83□□□□□ -0.36
RAPGEF3-201ENST00000389212 REEP2Q9BRK0 252 aa12.83□□□□□ -0.36
RAPGEF3-201ENST00000389212 TLR10Q9BXR5 811 aa12.83□□□□□ -0.36
RAPGEF3-201ENST00000389212 LRRC27Q9C0I9 530 aa12.83□□□□□ -0.36
RAPGEF3-201ENST00000389212 KCTD10Q9H3F6 313 aa12.83□□□□□ -0.36
RAPGEF3-201ENST00000389212 KIF9Q9HAQ2 790 aa12.83□□□□□ -0.36
RAPGEF3-201ENST00000389212 ARFGEF1Q9Y6D6 1849 aa12.82□□□□□ -0.36
RAPGEF3-201ENST00000389212 ZSCAN5CA6NGD5 496 aaPredicted RBP12.82□□□□□ -0.36
RAPGEF3-201ENST00000389212 ZBTB39O15060 712 aa12.82□□□□□ -0.36
RAPGEF3-201ENST00000389212 PALMO75781 387 aa12.82□□□□□ -0.36
RAPGEF3-201ENST00000389212 KIAA0754O94854 1291 aa12.82□□□□□ -0.36
RAPGEF3-201ENST00000389212 GH2P01242 217 aa12.82□□□□□ -0.36
RAPGEF3-201ENST00000389212 NPR1P16066 1061 aa12.82□□□□□ -0.36
RAPGEF3-201ENST00000389212 KLRC1P26715 233 aa12.82□□□□□ -0.36
RAPGEF3-201ENST00000389212 SLC12A3P55017 1021 aa12.82□□□□□ -0.36
RAPGEF3-201ENST00000389212 KCNH2Q12809 1159 aa12.82□□□□□ -0.36
RAPGEF3-201ENST00000389212 E2F5Q15329 346 aa12.82□□□□□ -0.36
RAPGEF3-201ENST00000389212 SLC9C1Q4G0N8 1177 aa12.82□□□□□ -0.36
RAPGEF3-201ENST00000389212 CCNI2Q6ZMN8 369 aaPredicted RBP12.82□□□□□ -0.36
RAPGEF3-201ENST00000389212 KSR1Q8IVT5 923 aa12.82□□□□□ -0.36
RAPGEF3-201ENST00000389212 TRIM59Q8IWR1 403 aa12.82□□□□□ -0.36
RAPGEF3-201ENST00000389212 PIGOQ8TEQ8 1089 aa12.82□□□□□ -0.36
RAPGEF3-201ENST00000389212 SCLT1Q96NL6 688 aa12.82□□□□□ -0.36
RAPGEF3-201ENST00000389212 RBM12Q9NTZ6 932 aaKnown RBP12.82□□□□□ -0.36
RAPGEF3-201ENST00000389212 KDM3AQ9Y4C1 1321 aa12.82□□□□□ -0.36
RAPGEF3-201ENST00000389212 FOCADQ5VW36 1801 aa12.82□□□□□ -0.36
RAPGEF3-201ENST00000389212 ESYT3A0FGR9 886 aa12.82□□□□□ -0.36
RAPGEF3-201ENST00000389212 KIF3CO14782 793 aa12.82□□□□□ -0.36
RAPGEF3-201ENST00000389212 RNF187Q5TA31 235 aaPredicted RBP12.82□□□□□ -0.36
RAPGEF3-201ENST00000389212 KLHDC7AQ5VTJ3 777 aa12.82□□□□□ -0.36
RAPGEF3-201ENST00000389212 TMX4Q9H1E5 349 aaPredicted RBP12.82□□□□□ -0.36
RAPGEF3-201ENST00000389212 BHMT2Q9H2M3 363 aa12.82□□□□□ -0.36
RAPGEF3-201ENST00000389212 HYOU1Q9Y4L1 999 aa12.82□□□□□ -0.36
RAPGEF3-201ENST00000389212 KIF4AO95239 1232 aa12.82□□□□□ -0.36
RAPGEF3-201ENST00000389212 CASP4P49662 377 aa12.82□□□□□ -0.36
RAPGEF3-201ENST00000389212 CCNHP51946 323 aaPredicted RBP12.82□□□□□ -0.36
RAPGEF3-201ENST00000389212 PROCA1Q8NCQ7 364 aaPredicted RBP12.82□□□□□ -0.36
RAPGEF3-201ENST00000389212 CEP72Q9P209 647 aa12.82□□□□□ -0.36
RAPGEF3-201ENST00000389212 TRPC5Q9UL62 973 aaPredicted RBP12.82□□□□□ -0.36
RAPGEF3-201ENST00000389212 SUGT1Q9Y2Z0 365 aa12.82□□□□□ -0.36
RAPGEF3-201ENST00000389212 A0A1B0GUA9 196 aa12.81□□□□□ -0.36
RAPGEF3-201ENST00000389212 SPDYE3A6NKU9 549 aa12.81□□□□□ -0.36
RAPGEF3-201ENST00000389212 SPATA31C1P0DKV0 1188 aa12.81□□□□□ -0.36
RAPGEF3-201ENST00000389212 ECE1P42892 770 aa12.81□□□□□ -0.36
RAPGEF3-201ENST00000389212 CDR1P51861 262 aa12.81□□□□□ -0.36
RAPGEF3-201ENST00000389212 SPIRE1Q08AE8 756 aa12.81□□□□□ -0.36
RAPGEF3-201ENST00000389212 KLHL30Q0D2K2 578 aa12.81□□□□□ -0.36
RAPGEF3-201ENST00000389212 GIT2Q14161 759 aa12.81□□□□□ -0.36
RAPGEF3-201ENST00000389212 ZYXQ15942 572 aaKnown RBP12.81□□□□□ -0.36
RAPGEF3-201ENST00000389212 GJB7Q6PEY0 223 aa12.81□□□□□ -0.36
RAPGEF3-201ENST00000389212 LRRC31Q6UY01 552 aa12.81□□□□□ -0.36
RAPGEF3-201ENST00000389212 FBXO11Q86XK2 927 aa12.81□□□□□ -0.36
RAPGEF3-201ENST00000389212 ETNPPLQ8TBG4 499 aa12.81□□□□□ -0.36
RAPGEF3-201ENST00000389212 FAM71BQ8TC56 605 aa12.81□□□□□ -0.36
RAPGEF3-201ENST00000389212 CCDC17Q96LX7 622 aa12.81□□□□□ -0.36
RAPGEF3-201ENST00000389212 NOX5Q96PH1 765 aa12.81□□□□□ -0.36
RAPGEF3-201ENST00000389212 RUSC1Q9BVN2 902 aa12.81□□□□□ -0.36
RAPGEF3-201ENST00000389212 PI4KBQ9UBF8 816 aa12.81□□□□□ -0.36
RAPGEF3-201ENST00000389212 A0A1W2PRG0 241 aa12.81□□□□□ -0.36
RAPGEF3-201ENST00000389212 EML1O00423 815 aa12.81□□□□□ -0.36
RAPGEF3-201ENST00000389212 CHRNA5P30532 468 aa12.81□□□□□ -0.36
RAPGEF3-201ENST00000389212 HOXD13P35453 343 aa12.81□□□□□ -0.36
RAPGEF3-201ENST00000389212 ZNF76P36508 570 aa12.81□□□□□ -0.36
RAPGEF3-201ENST00000389212 IRX1P78414 480 aaPredicted RBP12.81□□□□□ -0.36
RAPGEF3-201ENST00000389212 CTTNQ14247 550 aaKnown RBP12.81□□□□□ -0.36
RAPGEF3-201ENST00000389212 KIAA0753Q2KHM9 967 aa12.81□□□□□ -0.36
RAPGEF3-201ENST00000389212 ABCB5Q2M3G0 1257 aa12.81□□□□□ -0.36
RAPGEF3-201ENST00000389212 SLC27A3Q5K4L6 730 aa12.81□□□□□ -0.36
RAPGEF3-201ENST00000389212 HYIQ5T013 277 aa12.81□□□□□ -0.36
RAPGEF3-201ENST00000389212 LENG9Q96B70 501 aa12.81□□□□□ -0.36
RAPGEF3-201ENST00000389212 ZDHHC15Q96MV8 337 aa12.81□□□□□ -0.36
RAPGEF3-201ENST00000389212 AMNQ9BXJ7 453 aa12.81□□□□□ -0.36
RAPGEF3-201ENST00000389212 HDAC9Q9UKV0 1011 aa12.81□□□□□ -0.36
RAPGEF3-201ENST00000389212 SAMM50Q9Y512 469 aa12.81□□□□□ -0.36
RAPGEF3-201ENST00000389212 ZC3H4Q9UPT8 1303 aaKnown RBP12.81□□□□□ -0.36
RAPGEF3-201ENST00000389212 LTBP1Q14766 1721 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms