RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 AAASQ9NRG9 546 aa24.55■■□□□ 1.52
CNEP1R1-201ENST00000389134 FAM86C1Q9NVL1 165 aa24.55■■□□□ 1.52
CNEP1R1-201ENST00000389134 PPFIA3O75145 1194 aa24.54■■□□□ 1.52
CNEP1R1-201ENST00000389134 INSRRP14616 1297 aa24.54■■□□□ 1.52
CNEP1R1-201ENST00000389134 NUBP1P53384 320 aa24.54■■□□□ 1.52
CNEP1R1-201ENST00000389134 FOXK2Q01167 660 aa24.54■■□□□ 1.52
CNEP1R1-201ENST00000389134 PAK2Q13177 524 aa24.54■■□□□ 1.52
CNEP1R1-201ENST00000389134 WTAPQ15007 396 aa24.54■■□□□ 1.52
CNEP1R1-201ENST00000389134 NEK1Q96PY6 1258 aa24.54■■□□□ 1.52
CNEP1R1-201ENST00000389134 TLR9Q9NR96 1032 aa24.54■■□□□ 1.52
CNEP1R1-201ENST00000389134 PCDHGC5Q9Y5F6 944 aa24.54■■□□□ 1.52
CNEP1R1-201ENST00000389134 IGSF9BQ9UPX0 1349 aa24.54■■□□□ 1.52
CNEP1R1-201ENST00000389134 VPS13AQ96RL7 3174 aa24.53■■□□□ 1.52
CNEP1R1-201ENST00000389134 PER2O15055 1255 aa24.53■■□□□ 1.52
CNEP1R1-201ENST00000389134 SART3Q15020 963 aaKnown RBP24.53■■□□□ 1.52
CNEP1R1-201ENST00000389134 PTPN21Q16825 1174 aa24.53■■□□□ 1.52
CNEP1R1-201ENST00000389134 PDE12Q6L8Q7 609 aaKnown RBP24.53■■□□□ 1.52
CNEP1R1-201ENST00000389134 CATIPQ7Z7H3 387 aa24.53■■□□□ 1.52
CNEP1R1-201ENST00000389134 CELF4Q9BZC1 486 aaKnown RBP24.53■■□□□ 1.52
CNEP1R1-201ENST00000389134 RNF216Q9NWF9 866 aaPredicted RBP24.53■■□□□ 1.52
CNEP1R1-201ENST00000389134 PCDHA2Q9Y5H9 948 aa24.53■■□□□ 1.52
CNEP1R1-201ENST00000389134 SRGAP2BP0DMP2 458 aa24.52■■□□□ 1.52
CNEP1R1-201ENST00000389134 ITGB5P18084 799 aa24.52■■□□□ 1.52
CNEP1R1-201ENST00000389134 SARSP49591 514 aaKnown RBP24.52■■□□□ 1.52
CNEP1R1-201ENST00000389134 DUSP6Q16828 381 aa24.52■■□□□ 1.52
CNEP1R1-201ENST00000389134 SPOUT1Q5T280 376 aaKnown RBP24.52■■□□□ 1.52
CNEP1R1-201ENST00000389134 B4GALNT3Q6L9W6 998 aa24.52■■□□□ 1.52
CNEP1R1-201ENST00000389134 SMC5Q8IY18 1101 aa24.52■■□□□ 1.52
CNEP1R1-201ENST00000389134 RRP36Q96EU6 259 aaKnown RBP24.52■■□□□ 1.52
CNEP1R1-201ENST00000389134 SENP2Q9HC62 589 aa24.52■■□□□ 1.52
CNEP1R1-201ENST00000389134 PCDHB7Q9Y5E2 793 aa24.52■■□□□ 1.52
CNEP1R1-201ENST00000389134 KDM3AQ9Y4C1 1321 aa24.52■■□□□ 1.52
CNEP1R1-201ENST00000389134 MAFGO15525 162 aa24.51■■□□□ 1.51
CNEP1R1-201ENST00000389134 GATMP50440 423 aa24.51■■□□□ 1.51
CNEP1R1-201ENST00000389134 TMEM62Q0P6H9 643 aa24.51■■□□□ 1.51
CNEP1R1-201ENST00000389134 MTMR1Q13613 665 aa24.51■■□□□ 1.51
CNEP1R1-201ENST00000389134 CHD1LQ86WJ1 897 aa24.51■■□□□ 1.51
CNEP1R1-201ENST00000389134 NME8Q8N427 588 aa24.51■■□□□ 1.51
CNEP1R1-201ENST00000389134 ZBTB10Q96DT7 871 aa24.51■■□□□ 1.51
CNEP1R1-201ENST00000389134 SPZ1Q9BXG8 430 aa24.51■■□□□ 1.51
CNEP1R1-201ENST00000389134 AZI2Q9H6S1 392 aa24.51■■□□□ 1.51
CNEP1R1-201ENST00000389134 U3KPZ7 1027 aaPredicted RBP24.51■■□□□ 1.51
CNEP1R1-201ENST00000389134 TMEM184AQ6ZMB5 413 aa24.5■■□□□ 1.51
CNEP1R1-201ENST00000389134 VN1R2Q8NFZ6 395 aa24.5■■□□□ 1.51
CNEP1R1-201ENST00000389134 RIPOR3Q96MK2 946 aa24.5■■□□□ 1.51
CNEP1R1-201ENST00000389134 MAP3K14Q99558 947 aa24.5■■□□□ 1.51
CNEP1R1-201ENST00000389134 TMX1Q9H3N1 280 aa24.5■■□□□ 1.51
CNEP1R1-201ENST00000389134 SEC63Q9UGP8 760 aaKnown RBP24.5■■□□□ 1.51
CNEP1R1-201ENST00000389134 UBIAD1Q9Y5Z9 338 aa24.5■■□□□ 1.51
CNEP1R1-201ENST00000389134 MYH9P35579 1960 aaKnown RBP24.49■■□□□ 1.51
CNEP1R1-201ENST00000389134 FGF18O76093 207 aa24.49■■□□□ 1.51
CNEP1R1-201ENST00000389134 SMARCA1P28370 1054 aa24.49■■□□□ 1.51
CNEP1R1-201ENST00000389134 RBM10P98175 930 aaKnown RBP24.49■■□□□ 1.51
CNEP1R1-201ENST00000389134 KRT76Q01546 638 aa24.49■■□□□ 1.51
CNEP1R1-201ENST00000389134 RALYLQ86SE5 291 aaKnown RBP24.49■■□□□ 1.51
CNEP1R1-201ENST00000389134 ZBTB33Q86T24 672 aa24.49■■□□□ 1.51
CNEP1R1-201ENST00000389134 TRPC6Q9Y210 931 aa24.49■■□□□ 1.51
CNEP1R1-201ENST00000389134 SMIM35A0A1B0GVV1 85 aa24.48■■□□□ 1.51
CNEP1R1-201ENST00000389134 PROB1E7EW31 1015 aa24.48■■□□□ 1.51
CNEP1R1-201ENST00000389134 ERVFC1P60507 584 aa24.48■■□□□ 1.51
CNEP1R1-201ENST00000389134 THNSL1Q8IYQ7 743 aa24.48■■□□□ 1.51
CNEP1R1-201ENST00000389134 NCOA7Q8NI08 942 aa24.48■■□□□ 1.51
CNEP1R1-201ENST00000389134 PCYT2Q99447 389 aa24.48■■□□□ 1.51
CNEP1R1-201ENST00000389134 S1PR5Q9H228 398 aa24.48■■□□□ 1.51
CNEP1R1-201ENST00000389134 RWDD1Q9H446 243 aaPredicted RBP24.48■■□□□ 1.51
CNEP1R1-201ENST00000389134 PSTPIP2Q9H939 334 aa24.48■■□□□ 1.51
CNEP1R1-201ENST00000389134 JPH1Q9HDC5 661 aaPredicted RBP24.48■■□□□ 1.51
CNEP1R1-201ENST00000389134 JADE2Q9NQC1 790 aa24.48■■□□□ 1.51
CNEP1R1-201ENST00000389134 TMEM260Q9NX78 707 aa24.48■■□□□ 1.51
CNEP1R1-201ENST00000389134 PKD2L1Q9P0L9 805 aa24.48■■□□□ 1.51
CNEP1R1-201ENST00000389134 WDR87Q6ZQQ6 2873 aa24.47■■□□□ 1.51
CNEP1R1-201ENST00000389134 TBKBP1A7MCY6 615 aa24.47■■□□□ 1.51
CNEP1R1-201ENST00000389134 H0Y858 1186 aa24.47■■□□□ 1.51
CNEP1R1-201ENST00000389134 FSCN2O14926 492 aa24.47■■□□□ 1.51
CNEP1R1-201ENST00000389134 CYP21A2P08686 494 aa24.47■■□□□ 1.51
CNEP1R1-201ENST00000389134 KIF5BP33176 963 aa24.47■■□□□ 1.51
CNEP1R1-201ENST00000389134 NFX1Q12986 1120 aaKnown RBP24.47■■□□□ 1.51
CNEP1R1-201ENST00000389134 ANKRD54Q6NXT1 300 aa24.47■■□□□ 1.51
CNEP1R1-201ENST00000389134 PLPPR4Q7Z2D5 763 aa24.47■■□□□ 1.51
CNEP1R1-201ENST00000389134 CTCFLQ8NI51 663 aaPredicted RBP24.47■■□□□ 1.51
CNEP1R1-201ENST00000389134 RASGRP4Q8TDF6 673 aa24.47■■□□□ 1.51
CNEP1R1-201ENST00000389134 LZTS2Q9BRK4 669 aa24.47■■□□□ 1.51
CNEP1R1-201ENST00000389134 IL25Q9H293 177 aa24.47■■□□□ 1.51
CNEP1R1-201ENST00000389134 C1orf112Q9NSG2 853 aa24.47■■□□□ 1.51
CNEP1R1-201ENST00000389134 SLC9A2Q9UBY0 812 aa24.47■■□□□ 1.51
CNEP1R1-201ENST00000389134 LZTS1Q9Y250 596 aa24.47■■□□□ 1.51
CNEP1R1-201ENST00000389134 IBSPP21815 317 aaPredicted RBP24.46■■□□□ 1.51
CNEP1R1-201ENST00000389134 TECP42680 631 aa24.46■■□□□ 1.51
CNEP1R1-201ENST00000389134 NUCB1Q02818 461 aa24.46■■□□□ 1.51
CNEP1R1-201ENST00000389134 AAMPQ13685 434 aa24.46■■□□□ 1.51
CNEP1R1-201ENST00000389134 KCNC3Q14003 757 aa24.46■■□□□ 1.51
CNEP1R1-201ENST00000389134 PLCB4Q15147 1175 aa24.46■■□□□ 1.51
CNEP1R1-201ENST00000389134 TMEM266Q2M3C6 531 aa24.46■■□□□ 1.51
CNEP1R1-201ENST00000389134 ODR4Q5SWX8 454 aa24.46■■□□□ 1.51
CNEP1R1-201ENST00000389134 COLGALT1Q8NBJ5 622 aa24.46■■□□□ 1.51
CNEP1R1-201ENST00000389134 DMDP11532 3685 aa24.46■■□□□ 1.51
CNEP1R1-201ENST00000389134 DENND3A2RUS2 1198 aa24.45■■□□□ 1.5
CNEP1R1-201ENST00000389134 GALR2O43603 387 aaPredicted RBP24.45■■□□□ 1.5
CNEP1R1-201ENST00000389134 HOXB8P17481 243 aaPredicted RBP24.45■■□□□ 1.5
CNEP1R1-201ENST00000389134 MTHFD1LQ6UB35 978 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms