RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 ADCY1Q08828 1119 aa15.12■□□□□ 0.01
SDC1-202ENST00000381150 GLE1Q53GS7 698 aaKnown RBP15.12■□□□□ 0.01
SDC1-202ENST00000381150 SP8Q8IXZ3 490 aa15.12■□□□□ 0.01
SDC1-202ENST00000381150 PURBQ96QR8 312 aaKnown RBP15.12■□□□□ 0.01
SDC1-202ENST00000381150 QSER1Q2KHR3 1735 aa15.12■□□□□ 0.01
SDC1-202ENST00000381150 CCDC189A1A4V9 331 aa15.12■□□□□ 0.01
SDC1-202ENST00000381150 DIAPH2O60879 1101 aa15.12■□□□□ 0.01
SDC1-202ENST00000381150 ZNF844Q08AG5 666 aa15.12■□□□□ 0.01
SDC1-202ENST00000381150 CCDC38Q502W7 563 aa15.12■□□□□ 0.01
SDC1-202ENST00000381150 MEX3CQ5U5Q3 659 aaKnown RBP15.12■□□□□ 0.01
SDC1-202ENST00000381150 CCDC50Q8IVM0 306 aa15.12■□□□□ 0.01
SDC1-202ENST00000381150 GLIS3Q8NEA6 775 aa15.12■□□□□ 0.01
SDC1-202ENST00000381150 GDF3Q9NR23 364 aa15.12■□□□□ 0.01
SDC1-202ENST00000381150 SEPT11Q9NVA2 429 aaKnown RBP15.12■□□□□ 0.01
SDC1-202ENST00000381150 SART1O43290 800 aaKnown RBP15.11■□□□□ 0.01
SDC1-202ENST00000381150 KLRC4O43908 158 aa15.11■□□□□ 0.01
SDC1-202ENST00000381150 CCDC197Q8NCU1 140 aa15.11■□□□□ 0.01
SDC1-202ENST00000381150 PRCCQ92733 491 aaPredicted RBP15.11■□□□□ 0.01
SDC1-202ENST00000381150 TRIM9Q9C026 710 aa15.11■□□□□ 0.01
SDC1-202ENST00000381150 CCSER1Q9C0I3 900 aa15.11■□□□□ 0.01
SDC1-202ENST00000381150 NEUROG2Q9H2A3 272 aa15.11■□□□□ 0.01
SDC1-202ENST00000381150 SEMA6BQ9H3T3 888 aa15.11■□□□□ 0.01
SDC1-202ENST00000381150 LRRC4CQ9HCJ2 640 aa15.11■□□□□ 0.01
SDC1-202ENST00000381150 TRAPPC3O43617 180 aa15.11■□□□□ 0.01
SDC1-202ENST00000381150 RHOBTB3O94955 611 aa15.11■□□□□ 0.01
SDC1-202ENST00000381150 PRPHP41219 470 aa15.11■□□□□ 0.01
SDC1-202ENST00000381150 MAP2K1Q02750 393 aaPredicted RBP15.11■□□□□ 0.01
SDC1-202ENST00000381150 LRRC14Q15048 493 aa15.11■□□□□ 0.01
SDC1-202ENST00000381150 CCDC84Q86UT8 332 aaPredicted RBP15.11■□□□□ 0.01
SDC1-202ENST00000381150 CERS5Q8N5B7 392 aa15.11■□□□□ 0.01
SDC1-202ENST00000381150 FAXDC2Q96IV6 333 aa15.11■□□□□ 0.01
SDC1-202ENST00000381150 SPAG5Q96R06 1193 aa15.11■□□□□ 0.01
SDC1-202ENST00000381150 PLIN4Q96Q06 1357 aa15.11■□□□□ 0.01
SDC1-202ENST00000381150 NRXN2Q9P2S2 1712 aa15.11■□□□□ 0.01
SDC1-202ENST00000381150 A0A087X0T9 212 aa15.11■□□□□ 0.01
SDC1-202ENST00000381150 TTI1O43156 1089 aa15.11■□□□□ 0.01
SDC1-202ENST00000381150 ANP32DO95626 131 aa15.11■□□□□ 0.01
SDC1-202ENST00000381150 FAM228BP0C875 321 aa15.11■□□□□ 0.01
SDC1-202ENST00000381150 ITGA4P13612 1032 aa15.11■□□□□ 0.01
SDC1-202ENST00000381150 GTF2IP78347 998 aa15.11■□□□□ 0.01
SDC1-202ENST00000381150 PPP4R3AQ6IN85 833 aa15.11■□□□□ 0.01
SDC1-202ENST00000381150 YTHDF3Q7Z739 585 aaKnown RBP15.11■□□□□ 0.01
SDC1-202ENST00000381150 CCDC25Q86WR0 208 aa15.11■□□□□ 0.01
SDC1-202ENST00000381150 ZBTB10Q96DT7 871 aa15.11■□□□□ 0.01
SDC1-202ENST00000381150 RIOX1Q9H6W3 641 aa15.11■□□□□ 0.01
SDC1-202ENST00000381150 SAMD15Q9P1V8 674 aa15.11■□□□□ 0.01
SDC1-202ENST00000381150 IGKV6D-41A0A0C4DH26 115 aa15.1■□□□□ 0.01
SDC1-202ENST00000381150 C6orf229H3BNL8 230 aa15.1■□□□□ 0.01
SDC1-202ENST00000381150 LAD1O00515 517 aa15.1■□□□□ 0.01
SDC1-202ENST00000381150 PPP1R12AO14974 1030 aaPredicted RBP15.1■□□□□ 0.01
SDC1-202ENST00000381150 TRIM37O94972 964 aa15.1■□□□□ 0.01
SDC1-202ENST00000381150 ATP6V1G2O95670 118 aa15.1■□□□□ 0.01
SDC1-202ENST00000381150 CALRP27797 417 aaKnown RBP15.1■□□□□ 0.01
SDC1-202ENST00000381150 TCERG1LQ5VWI1 586 aa15.1■□□□□ 0.01
SDC1-202ENST00000381150 SLF2Q8IX21 1173 aa15.1■□□□□ 0.01
SDC1-202ENST00000381150 A1CFQ9NQ94 594 aaKnown RBP15.1■□□□□ 0.01
SDC1-202ENST00000381150 KBTBD4Q9NVX7 518 aa15.1■□□□□ 0.01
SDC1-202ENST00000381150 USP17L5A8MUK1 530 aa15.1■□□□□ 0.01
SDC1-202ENST00000381150 EDIL3O43854 480 aa15.1■□□□□ 0.01
SDC1-202ENST00000381150 MMEP08473 750 aa15.1■□□□□ 0.01
SDC1-202ENST00000381150 CRYMQ14894 314 aa15.1■□□□□ 0.01
SDC1-202ENST00000381150 SOGA3Q5TF21 947 aa15.1■□□□□ 0.01
SDC1-202ENST00000381150 CALML4Q96GE6 196 aa15.1■□□□□ 0.01
SDC1-202ENST00000381150 LBHD1Q9BQE6 289 aaPredicted RBP15.1■□□□□ 0.01
SDC1-202ENST00000381150 TRIM51Q9BSJ1 452 aa15.1■□□□□ 0.01
SDC1-202ENST00000381150 ATP6V0A2Q9Y487 856 aa15.1■□□□□ 0.01
SDC1-202ENST00000381150 HSPA1LP34931 641 aa15.09■□□□□ 0.01
SDC1-202ENST00000381150 CNNM4Q6P4Q7 775 aa15.09■□□□□ 0.01
SDC1-202ENST00000381150 OTUD6AQ7L8S5 288 aa15.09■□□□□ 0.01
SDC1-202ENST00000381150 DDX4Q9NQI0 724 aaKnown RBP15.09■□□□□ 0.01
SDC1-202ENST00000381150 SMCO2A6NFE2 343 aa15.09■□□□□ 0.01
SDC1-202ENST00000381150 C21orf2O43822 256 aa15.09■□□□□ 0.01
SDC1-202ENST00000381150 ELF3P78545 371 aaPredicted RBP15.09■□□□□ 0.01
SDC1-202ENST00000381150 KCNB1Q14721 858 aa15.09■□□□□ 0.01
SDC1-202ENST00000381150 ZKSCAN8Q15776 578 aaPredicted RBP15.09■□□□□ 0.01
SDC1-202ENST00000381150 MAN2A1Q16706 1144 aa15.09■□□□□ 0.01
SDC1-202ENST00000381150 CUL5Q93034 780 aa15.09■□□□□ 0.01
SDC1-202ENST00000381150 QTRT2Q9H974 415 aaKnown RBP15.09■□□□□ 0.01
SDC1-202ENST00000381150 MTMR4Q9NYA4 1195 aa15.09■□□□□ 0.01
SDC1-202ENST00000381150 PPEF1O14829 653 aaPredicted RBP15.09■□□□□ 0.01
SDC1-202ENST00000381150 SNHG28P0DPA3 235 aa15.09■□□□□ 0.01
SDC1-202ENST00000381150 PRLRP16471 622 aa15.09■□□□□ 0.01
SDC1-202ENST00000381150 AMPD3Q01432 767 aa15.09■□□□□ 0.01
SDC1-202ENST00000381150 UAP1Q16222 522 aaPredicted RBP15.09■□□□□ 0.01
SDC1-202ENST00000381150 FAM83BQ5T0W9 1011 aa15.09■□□□□ 0.01
SDC1-202ENST00000381150 USP38Q8NB14 1042 aa15.09■□□□□ 0.01
SDC1-202ENST00000381150 KIAA0895Q8NCT3 520 aa15.09■□□□□ 0.01
SDC1-202ENST00000381150 CHMP6Q96FZ7 201 aa15.09■□□□□ 0.01
SDC1-202ENST00000381150 ERGIC2Q96RQ1 377 aa15.09■□□□□ 0.01
SDC1-202ENST00000381150 PIGSQ96S52 555 aa15.09■□□□□ 0.01
SDC1-202ENST00000381150 COA1Q9GZY4 146 aa15.09■□□□□ 0.01
SDC1-202ENST00000381150 CAND2O75155 1236 aa15.08■□□□□ 0
SDC1-202ENST00000381150 KRT13P13646 458 aa15.08■□□□□ 0
SDC1-202ENST00000381150 CHN1P15882 459 aa15.08■□□□□ 0
SDC1-202ENST00000381150 NAPAP54920 295 aa15.08■□□□□ 0
SDC1-202ENST00000381150 PLTPP55058 493 aa15.08■□□□□ 0
SDC1-202ENST00000381150 SV2BQ7L1I2 683 aa15.08■□□□□ 0
SDC1-202ENST00000381150 PEX26Q7Z412 305 aa15.08■□□□□ 0
SDC1-202ENST00000381150 PSMD1Q99460 953 aa15.08■□□□□ 0
SDC1-202ENST00000381150 UBA5Q9GZZ9 404 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms