RNA–Protein interactions for RNA: ENST00000380324.7

USP3-202, Transcript of ubiquitin specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-202ENST00000380324 JADE2Q9NQC1 790 aa13.24□□□□□ -0.29
USP3-202ENST00000380324 OLFML3Q9NRN5 406 aa13.24□□□□□ -0.29
USP3-202ENST00000380324 LRRC53A6NM62 1247 aa13.23□□□□□ -0.29
USP3-202ENST00000380324 CLIC2O15247 247 aa13.23□□□□□ -0.29
USP3-202ENST00000380324 DHX15O43143 795 aaKnown RBP13.23□□□□□ -0.29
USP3-202ENST00000380324 GAP43P17677 238 aa13.23□□□□□ -0.29
USP3-202ENST00000380324 ARHGAP25P42331 645 aa13.23□□□□□ -0.29
USP3-202ENST00000380324 APBA1Q02410 837 aa13.23□□□□□ -0.29
USP3-202ENST00000380324 RRAGAQ7L523 313 aa13.23□□□□□ -0.29
USP3-202ENST00000380324 CACNA2D4Q7Z3S7 1137 aa13.23□□□□□ -0.29
USP3-202ENST00000380324 KCTD17Q8N5Z5 321 aa13.23□□□□□ -0.29
USP3-202ENST00000380324 MNS1Q8NEH6 495 aa13.23□□□□□ -0.29
USP3-202ENST00000380324 NEK11Q8NG66 645 aa13.23□□□□□ -0.29
USP3-202ENST00000380324 PDCD2LQ9BRP1 358 aa13.23□□□□□ -0.29
USP3-202ENST00000380324 TMOD4Q9NZQ9 345 aa13.23□□□□□ -0.29
USP3-202ENST00000380324 TCEAL9Q9UHQ7 104 aa13.23□□□□□ -0.29
USP3-202ENST00000380324 ZNF214Q9UL59 606 aaPredicted RBP13.23□□□□□ -0.29
USP3-202ENST00000380324 WDR81Q562E7 1941 aa13.23□□□□□ -0.29
USP3-202ENST00000380324 HERVK_113P62684 666 aa13.23□□□□□ -0.29
USP3-202ENST00000380324 KCNMA1Q12791 1236 aa13.23□□□□□ -0.29
USP3-202ENST00000380324 DCAF17Q5H9S7 520 aaPredicted RBP13.23□□□□□ -0.29
USP3-202ENST00000380324 NIPA1Q7RTP0 329 aa13.23□□□□□ -0.29
USP3-202ENST00000380324 FAM178BQ8IXR5 827 aa13.23□□□□□ -0.29
USP3-202ENST00000380324 LSM14BQ9BX40 385 aaKnown RBP13.23□□□□□ -0.29
USP3-202ENST00000380324 CARD6Q9BX69 1037 aa13.23□□□□□ -0.29
USP3-202ENST00000380324 NLRC4Q9NPP4 1024 aa13.23□□□□□ -0.29
USP3-202ENST00000380324 TYW1Q9NV66 732 aaKnown RBP13.23□□□□□ -0.29
USP3-202ENST00000380324 GUCA1BQ9UMX6 200 aa13.23□□□□□ -0.29
USP3-202ENST00000380324 TRAF3IP3Q9Y228 551 aa13.23□□□□□ -0.29
USP3-202ENST00000380324 ZMYM2Q9UBW7 1377 aa13.23□□□□□ -0.29
USP3-202ENST00000380324 TMEM150BA6NC51 233 aa13.22□□□□□ -0.29
USP3-202ENST00000380324 PDXKO00764 312 aa13.22□□□□□ -0.29
USP3-202ENST00000380324 CALUO43852 315 aaPredicted RBP13.22□□□□□ -0.29
USP3-202ENST00000380324 ATP9AO75110 1047 aa13.22□□□□□ -0.29
USP3-202ENST00000380324 IPO7O95373 1038 aaKnown RBP13.22□□□□□ -0.29
USP3-202ENST00000380324 NR3C1P04150 777 aa13.22□□□□□ -0.29
USP3-202ENST00000380324 CYLC1P35663 651 aaPredicted RBP13.22□□□□□ -0.29
USP3-202ENST00000380324 MARSP56192 900 aaKnown RBP13.22□□□□□ -0.29
USP3-202ENST00000380324 VGLL4Q14135 290 aa13.22□□□□□ -0.29
USP3-202ENST00000380324 TMEM132BQ14DG7 1078 aa13.22□□□□□ -0.29
USP3-202ENST00000380324 ERCC6LQ2NKX8 1250 aa13.22□□□□□ -0.29
USP3-202ENST00000380324 ODR4Q5SWX8 454 aa13.22□□□□□ -0.29
USP3-202ENST00000380324 KIAA1328Q86T90 577 aa13.22□□□□□ -0.29
USP3-202ENST00000380324 ZC3H3Q8IXZ2 948 aaKnown RBP13.22□□□□□ -0.29
USP3-202ENST00000380324 SLC35F6Q8N357 371 aa13.22□□□□□ -0.29
USP3-202ENST00000380324 PDCL2Q8N4E4 241 aa13.22□□□□□ -0.29
USP3-202ENST00000380324 REPS2Q8NFH8 660 aa13.22□□□□□ -0.29
USP3-202ENST00000380324 NEK9Q8TD19 979 aa13.22□□□□□ -0.29
USP3-202ENST00000380324 C12orf42Q96LP6 360 aa13.22□□□□□ -0.29
USP3-202ENST00000380324 CCDC43Q96MW1 224 aaKnown RBP13.22□□□□□ -0.29
USP3-202ENST00000380324 MAP3K20Q9NYL2 800 aaKnown RBP13.22□□□□□ -0.29
USP3-202ENST00000380324 RNF181Q9P0P0 153 aa13.22□□□□□ -0.29
USP3-202ENST00000380324 PPP2R3BQ9Y5P8 575 aa13.22□□□□□ -0.29
USP3-202ENST00000380324 C19orf81C9J6K1 198 aa13.22□□□□□ -0.29
USP3-202ENST00000380324 ADM5C9JUS6 153 aa13.22□□□□□ -0.29
USP3-202ENST00000380324 HIP1RO75146 1068 aa13.22□□□□□ -0.29
USP3-202ENST00000380324 AKAP3O75969 853 aa13.22□□□□□ -0.29
USP3-202ENST00000380324 FDX1P10109 184 aa13.22□□□□□ -0.29
USP3-202ENST00000380324 MUTP22033 750 aa13.22□□□□□ -0.29
USP3-202ENST00000380324 DSG3P32926 999 aa13.22□□□□□ -0.29
USP3-202ENST00000380324 CASP4P49662 377 aa13.22□□□□□ -0.29
USP3-202ENST00000380324 CYP27A1Q02318 531 aa13.22□□□□□ -0.29
USP3-202ENST00000380324 COG2Q14746 738 aa13.22□□□□□ -0.29
USP3-202ENST00000380324 BMT2Q1RMZ1 405 aa13.22□□□□□ -0.29
USP3-202ENST00000380324 SUPT20HL1Q3ZLR7 823 aa13.22□□□□□ -0.29
USP3-202ENST00000380324 TCERG1LQ5VWI1 586 aa13.22□□□□□ -0.29
USP3-202ENST00000380324 PADI6Q6TGC4 694 aa13.22□□□□□ -0.29
USP3-202ENST00000380324 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.22□□□□□ -0.29
USP3-202ENST00000380324 CNKSR2Q8WXI2 1034 aa13.22□□□□□ -0.29
USP3-202ENST00000380324 IQCDQ96DY2 449 aa13.22□□□□□ -0.29
USP3-202ENST00000380324 ZSWIM4Q9H7M6 989 aa13.22□□□□□ -0.29
USP3-202ENST00000380324 ARMCX3Q9UH62 379 aaPredicted RBP13.22□□□□□ -0.29
USP3-202ENST00000380324 MRFAP1Q9Y605 127 aa13.22□□□□□ -0.29
USP3-202ENST00000380324 RRP9O43818 475 aaKnown RBP13.21□□□□□ -0.29
USP3-202ENST00000380324 P4HBP07237 508 aaKnown RBP13.21□□□□□ -0.29
USP3-202ENST00000380324 KCNH2Q12809 1159 aa13.21□□□□□ -0.29
USP3-202ENST00000380324 UGCGQ16739 394 aa13.21□□□□□ -0.29
USP3-202ENST00000380324 BAP1Q92560 729 aa13.21□□□□□ -0.29
USP3-202ENST00000380324 CCDC42Q96M95 316 aa13.21□□□□□ -0.29
USP3-202ENST00000380324 SPON1Q9HCB6 807 aa13.21□□□□□ -0.29
USP3-202ENST00000380324 ARHGAP20Q9P2F6 1191 aa13.21□□□□□ -0.29
USP3-202ENST00000380324 PNMA2Q9UL42 364 aa13.21□□□□□ -0.29
USP3-202ENST00000380324 ODF2LQ9ULJ1 636 aa13.21□□□□□ -0.29
USP3-202ENST00000380324 PLAGL2Q9UPG8 496 aa13.21□□□□□ -0.29
USP3-202ENST00000380324 LCTP09848 1927 aa13.21□□□□□ -0.29
USP3-202ENST00000380324 SPDYE16A6NNV3 312 aaPredicted RBP13.21□□□□□ -0.3
USP3-202ENST00000380324 PEX10O60683 326 aa13.21□□□□□ -0.3
USP3-202ENST00000380324 USO1O60763 962 aaKnown RBP13.21□□□□□ -0.3
USP3-202ENST00000380324 XRCC5P13010 732 aaKnown RBP13.21□□□□□ -0.3
USP3-202ENST00000380324 CCDC122Q5T0U0 273 aa13.21□□□□□ -0.3
USP3-202ENST00000380324 UTP14CQ5TAP6 766 aaKnown RBP13.21□□□□□ -0.3
USP3-202ENST00000380324 FIZ1Q96SL8 496 aa13.21□□□□□ -0.3
USP3-202ENST00000380324 TEX13BQ9BXU2 312 aa13.21□□□□□ -0.3
USP3-202ENST00000380324 DEF6Q9H4E7 631 aa13.21□□□□□ -0.3
USP3-202ENST00000380324 AFG3L2Q9Y4W6 797 aa13.21□□□□□ -0.3
USP3-202ENST00000380324 PCDHB13Q9Y5F0 798 aa13.21□□□□□ -0.3
USP3-202ENST00000380324 SNCAIPQ9Y6H5 919 aa13.21□□□□□ -0.3
USP3-202ENST00000380324 K7ENM7 598 aa13.2□□□□□ -0.3
USP3-202ENST00000380324 EIF3DO15371 548 aaKnown RBP eCLIP13.2□□□□□ -0.3
USP3-202ENST00000380324 TGFB1I1O43294 461 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms