RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 NRBP2Q9NSY0 501 aa13.38□□□□□ -0.27
PCNA-201ENST00000379143 LRWD1Q9UFC0 647 aa13.38□□□□□ -0.27
PCNA-201ENST00000379143 PRKAG2Q9UGJ0 569 aa13.38□□□□□ -0.27
PCNA-201ENST00000379143 NR2E3Q9Y5X4 410 aa13.38□□□□□ -0.27
PCNA-201ENST00000379143 CLIC4Q9Y696 253 aa13.38□□□□□ -0.27
PCNA-201ENST00000379143 COL1A2P08123 1366 aa13.38□□□□□ -0.27
PCNA-201ENST00000379143 ALPK3Q96L96 1907 aa13.37□□□□□ -0.27
PCNA-201ENST00000379143 MYH9P35579 1960 aaKnown RBP13.37□□□□□ -0.27
PCNA-201ENST00000379143 DLL1O00548 723 aa13.37□□□□□ -0.27
PCNA-201ENST00000379143 B4GALT4O60513 344 aa13.37□□□□□ -0.27
PCNA-201ENST00000379143 OATP04181 439 aa13.37□□□□□ -0.27
PCNA-201ENST00000379143 CLTBP09497 229 aa13.37□□□□□ -0.27
PCNA-201ENST00000379143 MUTP22033 750 aa13.37□□□□□ -0.27
PCNA-201ENST00000379143 DDIT3P35638 169 aa13.37□□□□□ -0.27
PCNA-201ENST00000379143 NASPP49321 788 aaPredicted RBP13.37□□□□□ -0.27
PCNA-201ENST00000379143 FAAP100Q0VG06 881 aa13.37□□□□□ -0.27
PCNA-201ENST00000379143 PPFIA1Q13136 1202 aa13.37□□□□□ -0.27
PCNA-201ENST00000379143 PTGISQ16647 500 aa13.37□□□□□ -0.27
PCNA-201ENST00000379143 XKR3Q5GH77 459 aa13.37□□□□□ -0.27
PCNA-201ENST00000379143 GDF6Q6KF10 455 aaPredicted RBP13.37□□□□□ -0.27
PCNA-201ENST00000379143 C4orf19Q8IY42 314 aa13.37□□□□□ -0.27
PCNA-201ENST00000379143 AK8Q96MA6 479 aa13.37□□□□□ -0.27
PCNA-201ENST00000379143 USP28Q96RU2 1077 aa13.37□□□□□ -0.27
PCNA-201ENST00000379143 HSD17B14Q9BPX1 270 aa13.37□□□□□ -0.27
PCNA-201ENST00000379143 ZSWIM4Q9H7M6 989 aa13.37□□□□□ -0.27
PCNA-201ENST00000379143 TUFT1Q9NNX1 390 aa13.37□□□□□ -0.27
PCNA-201ENST00000379143 CIZ1Q9ULV3 898 aaPredicted RBP13.37□□□□□ -0.27
PCNA-201ENST00000379143 WDR81Q562E7 1941 aa13.36□□□□□ -0.27
PCNA-201ENST00000379143 CUL9Q8IWT3 2517 aa13.36□□□□□ -0.27
PCNA-201ENST00000379143 VWA3AA6NCI4 1184 aa13.36□□□□□ -0.27
PCNA-201ENST00000379143 ZNF862O60290 1169 aa13.36□□□□□ -0.27
PCNA-201ENST00000379143 SLITRK3O94933 977 aa13.36□□□□□ -0.27
PCNA-201ENST00000379143 YEATS4O95619 227 aa13.36□□□□□ -0.27
PCNA-201ENST00000379143 INSRRP14616 1297 aa13.36□□□□□ -0.27
PCNA-201ENST00000379143 ATP4AP20648 1035 aa13.36□□□□□ -0.27
PCNA-201ENST00000379143 RPA1P27694 616 aa13.36□□□□□ -0.27
PCNA-201ENST00000379143 PRKCEQ02156 737 aa13.36□□□□□ -0.27
PCNA-201ENST00000379143 CEBPZQ03701 1054 aaKnown RBP13.36□□□□□ -0.27
PCNA-201ENST00000379143 SLC39A14Q15043 492 aa13.36□□□□□ -0.27
PCNA-201ENST00000379143 PTPAQ15257 358 aa13.36□□□□□ -0.27
PCNA-201ENST00000379143 GRIK4Q16099 956 aa13.36□□□□□ -0.27
PCNA-201ENST00000379143 ZNF484Q5JVG2 852 aa13.36□□□□□ -0.27
PCNA-201ENST00000379143 OTUD6AQ7L8S5 288 aa13.36□□□□□ -0.27
PCNA-201ENST00000379143 C7orf61Q8IZ16 206 aa13.36□□□□□ -0.27
PCNA-201ENST00000379143 CCDC155Q8N6L0 562 aa13.36□□□□□ -0.27
PCNA-201ENST00000379143 BANK1Q8NDB2 785 aa13.36□□□□□ -0.27
PCNA-201ENST00000379143 LMBR1Q8WVP7 490 aa13.36□□□□□ -0.27
PCNA-201ENST00000379143 DYDC2Q96IM9 177 aa13.36□□□□□ -0.27
PCNA-201ENST00000379143 LXNQ9BS40 222 aa13.36□□□□□ -0.27
PCNA-201ENST00000379143 POLR3CQ9BUI4 534 aaPredicted RBP13.36□□□□□ -0.27
PCNA-201ENST00000379143 TRPV6Q9H1D0 765 aa13.36□□□□□ -0.27
PCNA-201ENST00000379143 TRMT13Q9NUP7 481 aaKnown RBP13.36□□□□□ -0.27
PCNA-201ENST00000379143 TMEM39AQ9NV64 488 aa13.36□□□□□ -0.27
PCNA-201ENST00000379143 SETD4Q9NVD3 440 aa13.36□□□□□ -0.27
PCNA-201ENST00000379143 ZDHHC9Q9Y397 364 aa13.36□□□□□ -0.27
PCNA-201ENST00000379143 LYPLA2O95372 231 aa13.35□□□□□ -0.27
PCNA-201ENST00000379143 RPLP2P05387 115 aaKnown RBP13.35□□□□□ -0.27
PCNA-201ENST00000379143 LONP1P36776 959 aaKnown RBP13.35□□□□□ -0.27
PCNA-201ENST00000379143 ADAM17P78536 824 aa13.35□□□□□ -0.27
PCNA-201ENST00000379143 CYP4A11Q02928 519 aa13.35□□□□□ -0.27
PCNA-201ENST00000379143 PTK7Q13308 1070 aa13.35□□□□□ -0.27
PCNA-201ENST00000379143 STK38Q15208 465 aa13.35□□□□□ -0.27
PCNA-201ENST00000379143 IL17AQ16552 155 aa13.35□□□□□ -0.27
PCNA-201ENST00000379143 UGCGQ16739 394 aa13.35□□□□□ -0.27
PCNA-201ENST00000379143 KRT79Q5XKE5 535 aa13.35□□□□□ -0.27
PCNA-201ENST00000379143 TPH2Q8IWU9 490 aa13.35□□□□□ -0.27
PCNA-201ENST00000379143 EXOC8Q8IYI6 725 aa13.35□□□□□ -0.27
PCNA-201ENST00000379143 LINC00301Q8NCQ3 95 aa13.35□□□□□ -0.27
PCNA-201ENST00000379143 SLC17A8Q8NDX2 589 aa13.35□□□□□ -0.27
PCNA-201ENST00000379143 NIFKQ9BYG3 293 aaKnown RBP13.35□□□□□ -0.27
PCNA-201ENST00000379143 FTOQ9C0B1 505 aaKnown RBP eCLIP13.35□□□□□ -0.27
PCNA-201ENST00000379143 RGL1Q9NZL6 768 aa13.35□□□□□ -0.27
PCNA-201ENST00000379143 TUBE1Q9UJT0 475 aa13.35□□□□□ -0.27
PCNA-201ENST00000379143 PPME1Q9Y570 386 aa13.35□□□□□ -0.27
PCNA-201ENST00000379143 SRPRBQ9Y5M8 271 aaKnown RBP13.35□□□□□ -0.27
PCNA-201ENST00000379143 MBLAC1A4D2B0 266 aaPredicted RBP13.34□□□□□ -0.27
PCNA-201ENST00000379143 KIAA0355O15063 1070 aa13.34□□□□□ -0.27
PCNA-201ENST00000379143 MAGEB2O15479 319 aa13.34□□□□□ -0.27
PCNA-201ENST00000379143 SLC26A4O43511 780 aa13.34□□□□□ -0.27
PCNA-201ENST00000379143 PPP6R2O75170 966 aa13.34□□□□□ -0.27
PCNA-201ENST00000379143 XRCC6P12956 609 aaKnown RBP eCLIP13.34□□□□□ -0.27
PCNA-201ENST00000379143 YWHABP31946 246 aaKnown RBP13.34□□□□□ -0.27
PCNA-201ENST00000379143 KRT85P78386 507 aa13.34□□□□□ -0.27
PCNA-201ENST00000379143 BFSP2Q13515 415 aa13.34□□□□□ -0.27
PCNA-201ENST00000379143 CTTNQ14247 550 aaKnown RBP13.34□□□□□ -0.27
PCNA-201ENST00000379143 TAF2Q6P1X5 1199 aa13.34□□□□□ -0.27
PCNA-201ENST00000379143 SERINC5Q86VE9 423 aa13.34□□□□□ -0.27
PCNA-201ENST00000379143 CATSPER3Q86XQ3 398 aa13.34□□□□□ -0.27
PCNA-201ENST00000379143 KCTD17Q8N5Z5 321 aa13.34□□□□□ -0.27
PCNA-201ENST00000379143 CAGE1Q8TC20 777 aa13.34□□□□□ -0.27
PCNA-201ENST00000379143 KCNG4Q8TDN1 519 aa13.34□□□□□ -0.27
PCNA-201ENST00000379143 SNX29Q8TEQ0 813 aa13.34□□□□□ -0.27
PCNA-201ENST00000379143 PPP1R13LQ8WUF5 828 aa13.34□□□□□ -0.27
PCNA-201ENST00000379143 PRDM5Q9NQX1 630 aaPredicted RBP13.34□□□□□ -0.27
PCNA-201ENST00000379143 PDLIM7Q9NR12 457 aa13.34□□□□□ -0.27
PCNA-201ENST00000379143 TFIP11Q9UBB9 837 aaKnown RBP13.34□□□□□ -0.27
PCNA-201ENST00000379143 SEPT9Q9UHD8 586 aaPredicted RBP13.34□□□□□ -0.27
PCNA-201ENST00000379143 TBX21Q9UL17 535 aa13.34□□□□□ -0.27
PCNA-201ENST00000379143 KDM3AQ9Y4C1 1321 aa13.33□□□□□ -0.27
PCNA-201ENST00000379143 KAT6AQ92794 2004 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms