RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 MYH4Q9Y623 1939 aa17.81■□□□□ 0.44
TRIM27-202ENST00000377199 AFPP02771 609 aaKnown RBP17.81■□□□□ 0.44
TRIM27-202ENST00000377199 NPR1P16066 1061 aa17.81■□□□□ 0.44
TRIM27-202ENST00000377199 ATP1A2P50993 1020 aa17.81■□□□□ 0.44
TRIM27-202ENST00000377199 MSL3Q8N5Y2 521 aaKnown RBP17.81■□□□□ 0.44
TRIM27-202ENST00000377199 GCNT4Q9P109 453 aa17.81■□□□□ 0.44
TRIM27-202ENST00000377199 GRID2IPA4D2P6 1211 aa17.81■□□□□ 0.44
TRIM27-202ENST00000377199 HLTFQ14527 1009 aaKnown RBP eCLIP17.81■□□□□ 0.44
TRIM27-202ENST00000377199 SYDE2Q5VT97 1194 aa17.81■□□□□ 0.44
TRIM27-202ENST00000377199 RNF10Q8N5U6 811 aaKnown RBP17.81■□□□□ 0.44
TRIM27-202ENST00000377199 MYCT1Q8N699 235 aa17.81■□□□□ 0.44
TRIM27-202ENST00000377199 DCAF4Q8WV16 495 aa17.81■□□□□ 0.44
TRIM27-202ENST00000377199 TAF4BQ92750 862 aa17.81■□□□□ 0.44
TRIM27-202ENST00000377199 LENG9Q96B70 501 aa17.81■□□□□ 0.44
TRIM27-202ENST00000377199 CCDC43Q96MW1 224 aaKnown RBP17.81■□□□□ 0.44
TRIM27-202ENST00000377199 RABGAP1Q9Y3P9 1069 aa17.81■□□□□ 0.44
TRIM27-202ENST00000377199 DDX39AO00148 427 aaKnown RBP17.8■□□□□ 0.44
TRIM27-202ENST00000377199 CEP104O60308 925 aa17.8■□□□□ 0.44
TRIM27-202ENST00000377199 HSF2BPO75031 334 aa17.8■□□□□ 0.44
TRIM27-202ENST00000377199 NR3C1P04150 777 aa17.8■□□□□ 0.44
TRIM27-202ENST00000377199 PRLRP16471 622 aa17.8■□□□□ 0.44
TRIM27-202ENST00000377199 COG2Q14746 738 aa17.8■□□□□ 0.44
TRIM27-202ENST00000377199 COL23A1Q86Y22 540 aaPredicted RBP17.8■□□□□ 0.44
TRIM27-202ENST00000377199 RBM46Q8TBY0 533 aaKnown RBP17.8■□□□□ 0.44
TRIM27-202ENST00000377199 EIF2AK1Q9BQI3 630 aaKnown RBP17.8■□□□□ 0.44
TRIM27-202ENST00000377199 NUCKS1Q9H1E3 243 aaKnown RBP17.8■□□□□ 0.44
TRIM27-202ENST00000377199 SEPT11Q9NVA2 429 aaKnown RBP17.8■□□□□ 0.44
TRIM27-202ENST00000377199 A0A1W2PRG0 241 aa17.8■□□□□ 0.44
TRIM27-202ENST00000377199 CLRN2A0PK11 232 aa17.8■□□□□ 0.44
TRIM27-202ENST00000377199 TCP10L2B9ZVM9 353 aa17.8■□□□□ 0.44
TRIM27-202ENST00000377199 ECE2O60344 883 aa17.8■□□□□ 0.44
TRIM27-202ENST00000377199 GFPT2O94808 682 aa17.8■□□□□ 0.44
TRIM27-202ENST00000377199 PON1P27169 355 aa17.8■□□□□ 0.44
TRIM27-202ENST00000377199 RPA1P27694 616 aa17.8■□□□□ 0.44
TRIM27-202ENST00000377199 EPHB4P54760 987 aa17.8■□□□□ 0.44
TRIM27-202ENST00000377199 ZDHHC15Q96MV8 337 aa17.8■□□□□ 0.44
TRIM27-202ENST00000377199 CSRNP1Q96S65 589 aa17.8■□□□□ 0.44
TRIM27-202ENST00000377199 NAP1L4Q99733 375 aaKnown RBP17.8■□□□□ 0.44
TRIM27-202ENST00000377199 IVLP07476 585 aa17.79■□□□□ 0.44
TRIM27-202ENST00000377199 BMP3P12645 472 aa17.79■□□□□ 0.44
TRIM27-202ENST00000377199 ALDH1B1P30837 517 aa17.79■□□□□ 0.44
TRIM27-202ENST00000377199 RRP1BQ14684 758 aaKnown RBP17.79■□□□□ 0.44
TRIM27-202ENST00000377199 AOC3Q16853 763 aa17.79■□□□□ 0.44
TRIM27-202ENST00000377199 TBC1D10BQ4KMP7 808 aaPredicted RBP17.79■□□□□ 0.44
TRIM27-202ENST00000377199 SRLQ86TD4 932 aa17.79■□□□□ 0.44
TRIM27-202ENST00000377199 SYT2Q8N9I0 419 aaPredicted RBP17.79■□□□□ 0.44
TRIM27-202ENST00000377199 EDEM3Q9BZQ6 932 aa17.79■□□□□ 0.44
TRIM27-202ENST00000377199 NYAP2Q9P242 653 aa17.79■□□□□ 0.44
TRIM27-202ENST00000377199 CYP2J2P51589 502 aa17.79■□□□□ 0.44
TRIM27-202ENST00000377199 ALKBH5Q6P6C2 394 aaKnown RBP17.79■□□□□ 0.44
TRIM27-202ENST00000377199 QTRT2Q9H974 415 aaKnown RBP17.79■□□□□ 0.44
TRIM27-202ENST00000377199 SCAF8Q9UPN6 1271 aaKnown RBP17.79■□□□□ 0.44
TRIM27-202ENST00000377199 FAM13AO94988 1023 aa17.79■□□□□ 0.44
TRIM27-202ENST00000377199 EPB41P11171 864 aaKnown RBP17.79■□□□□ 0.44
TRIM27-202ENST00000377199 ABCB4P21439 1286 aa17.79■□□□□ 0.44
TRIM27-202ENST00000377199 AP3B2Q13367 1082 aa17.79■□□□□ 0.44
TRIM27-202ENST00000377199 RPS6KA1Q15418 735 aa17.79■□□□□ 0.44
TRIM27-202ENST00000377199 TMEM179Q6ZVK1 233 aa17.79■□□□□ 0.44
TRIM27-202ENST00000377199 ZIM3Q96PE6 472 aa17.79■□□□□ 0.44
TRIM27-202ENST00000377199 FEZ2Q9UHY8 353 aaPredicted RBP17.79■□□□□ 0.44
TRIM27-202ENST00000377199 KLRG2A4D1S0 409 aaPredicted RBP17.78■□□□□ 0.44
TRIM27-202ENST00000377199 RBAK-RBAKDNI3L0D1 243 aa17.78■□□□□ 0.44
TRIM27-202ENST00000377199 CALUO43852 315 aaPredicted RBP17.78■□□□□ 0.44
TRIM27-202ENST00000377199 CHRNA5P30532 468 aa17.78■□□□□ 0.44
TRIM27-202ENST00000377199 EDRF1Q3B7T1 1238 aa17.78■□□□□ 0.44
TRIM27-202ENST00000377199 RBM26Q5T8P6 1007 aaKnown RBP17.78■□□□□ 0.44
TRIM27-202ENST00000377199 DDX42Q86XP3 938 aaKnown RBP eCLIP17.78■□□□□ 0.44
TRIM27-202ENST00000377199 IFT20Q8IY31 132 aa17.78■□□□□ 0.44
TRIM27-202ENST00000377199 U2AF1L4Q8WU68 220 aaKnown RBP17.78■□□□□ 0.44
TRIM27-202ENST00000377199 DYDC2Q96IM9 177 aa17.78■□□□□ 0.44
TRIM27-202ENST00000377199 SH2D3AQ9BRG2 576 aa17.78■□□□□ 0.44
TRIM27-202ENST00000377199 LY75O60449 1722 aa17.78■□□□□ 0.44
TRIM27-202ENST00000377199 MEI1Q5TIA1 1274 aa17.78■□□□□ 0.44
TRIM27-202ENST00000377199 IRF2BP2Q7Z5L9 587 aa17.78■□□□□ 0.44
TRIM27-202ENST00000377199 ADAT2Q7Z6V5 191 aaKnown RBP17.78■□□□□ 0.44
TRIM27-202ENST00000377199 GLT8D2Q9H1C3 349 aa17.78■□□□□ 0.44
TRIM27-202ENST00000377199 AIPL1Q9NZN9 384 aa17.78■□□□□ 0.44
TRIM27-202ENST00000377199 SMCHD1A6NHR9 2005 aa17.77■□□□□ 0.44
TRIM27-202ENST00000377199 ASTN1O14525 1302 aa17.77■□□□□ 0.44
TRIM27-202ENST00000377199 TULP2O00295 520 aa17.77■□□□□ 0.44
TRIM27-202ENST00000377199 OPLAHO14841 1288 aa17.77■□□□□ 0.44
TRIM27-202ENST00000377199 RAD51CO43502 376 aa17.77■□□□□ 0.44
TRIM27-202ENST00000377199 ZEB2O60315 1214 aa17.77■□□□□ 0.44
TRIM27-202ENST00000377199 GNGT1P63211 74 aa17.77■□□□□ 0.44
TRIM27-202ENST00000377199 SLC27A3Q5K4L6 730 aa17.77■□□□□ 0.44
TRIM27-202ENST00000377199 NAA35Q5VZE5 725 aa17.77■□□□□ 0.44
TRIM27-202ENST00000377199 ACER1Q8TDN7 264 aa17.77■□□□□ 0.44
TRIM27-202ENST00000377199 NAGPAQ9UK23 515 aa17.77■□□□□ 0.44
TRIM27-202ENST00000377199 PRR12Q9ULL5 1215 aa17.77■□□□□ 0.44
TRIM27-202ENST00000377199 MYO3BQ8WXR4 1341 aa17.77■□□□□ 0.44
TRIM27-202ENST00000377199 CYP3A7-CYP3A51PA0A087WV96 503 aa17.77■□□□□ 0.44
TRIM27-202ENST00000377199 TRIM49P0CI25 452 aa17.77■□□□□ 0.44
TRIM27-202ENST00000377199 TRIM49CP0CI26 452 aa17.77■□□□□ 0.44
TRIM27-202ENST00000377199 CYP3A7P24462 503 aa17.77■□□□□ 0.44
TRIM27-202ENST00000377199 CCT5P48643 541 aa17.77■□□□□ 0.44
TRIM27-202ENST00000377199 TTMPQ5BVD1 217 aa17.77■□□□□ 0.44
TRIM27-202ENST00000377199 PODNQ7Z5L7 613 aa17.77■□□□□ 0.44
TRIM27-202ENST00000377199 SYN2Q92777 582 aaPredicted RBP17.77■□□□□ 0.44
TRIM27-202ENST00000377199 PRMT6Q96LA8 375 aaPredicted RBP17.77■□□□□ 0.44
TRIM27-202ENST00000377199 TRPC5Q9UL62 973 aaPredicted RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms