RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 JAK3P52333 1124 aa18.01■□□□□ 0.47
C11orf88-202ENST00000375618 ZNF174Q15697 407 aa18.01■□□□□ 0.47
C11orf88-202ENST00000375618 CALCRLQ16602 461 aa18.01■□□□□ 0.47
C11orf88-202ENST00000375618 RETREG2Q8NC44 543 aa18.01■□□□□ 0.47
C11orf88-202ENST00000375618 LRCH3Q96II8 777 aa18.01■□□□□ 0.47
C11orf88-202ENST00000375618 WRAP73Q9P2S5 460 aaPredicted RBP18.01■□□□□ 0.47
C11orf88-202ENST00000375618 TCEAL9Q9UHQ7 104 aa18.01■□□□□ 0.47
C11orf88-202ENST00000375618 TUBE1Q9UJT0 475 aa18.01■□□□□ 0.47
C11orf88-202ENST00000375618 NEMFO60524 1076 aa18■□□□□ 0.47
C11orf88-202ENST00000375618 GNAT1P11488 350 aa18■□□□□ 0.47
C11orf88-202ENST00000375618 THPOP40225 353 aa18■□□□□ 0.47
C11orf88-202ENST00000375618 RASIP1Q5U651 963 aa18■□□□□ 0.47
C11orf88-202ENST00000375618 CCDC155Q8N6L0 562 aa18■□□□□ 0.47
C11orf88-202ENST00000375618 RDM1Q8NG50 284 aa18■□□□□ 0.47
C11orf88-202ENST00000375618 CXXC1Q9P0U4 656 aaPredicted RBP18■□□□□ 0.47
C11orf88-202ENST00000375618 KIF3AQ9Y496 699 aa18■□□□□ 0.47
C11orf88-202ENST00000375618 RRN3P2A6NIE6 340 aa17.99■□□□□ 0.47
C11orf88-202ENST00000375618 HBP1O60381 514 aa17.99■□□□□ 0.47
C11orf88-202ENST00000375618 CTSHP09668 335 aa17.99■□□□□ 0.47
C11orf88-202ENST00000375618 PRKCEQ02156 737 aa17.99■□□□□ 0.47
C11orf88-202ENST00000375618 LRIT3Q3SXY7 679 aa17.99■□□□□ 0.47
C11orf88-202ENST00000375618 TTC38Q5R3I4 469 aa17.99■□□□□ 0.47
C11orf88-202ENST00000375618 LARP1BQ659C4 914 aaKnown RBP17.99■□□□□ 0.47
C11orf88-202ENST00000375618 FAM109BQ6ICB4 259 aaPredicted RBP17.99■□□□□ 0.47
C11orf88-202ENST00000375618 CKAP2LQ8IYA6 745 aa17.99■□□□□ 0.47
C11orf88-202ENST00000375618 C4orf32Q8N8J7 132 aa17.99■□□□□ 0.47
C11orf88-202ENST00000375618 BANK1Q8NDB2 785 aa17.99■□□□□ 0.47
C11orf88-202ENST00000375618 DNAJB3Q8WWF6 145 aa17.99■□□□□ 0.47
C11orf88-202ENST00000375618 RNPC3Q96LT9 517 aaKnown RBP17.99■□□□□ 0.47
C11orf88-202ENST00000375618 PCDHB6Q9Y5E3 794 aa17.99■□□□□ 0.47
C11orf88-202ENST00000375618 SIP14410 1827 aa17.99■□□□□ 0.47
C11orf88-202ENST00000375618 TET1Q8NFU7 2136 aa17.99■□□□□ 0.47
C11orf88-202ENST00000375618 LAMA3Q16787 3333 aa17.98■□□□□ 0.47
C11orf88-202ENST00000375618 CHRNA1P02708 482 aa17.98■□□□□ 0.47
C11orf88-202ENST00000375618 KLRC1P26715 233 aa17.98■□□□□ 0.47
C11orf88-202ENST00000375618 GNL2Q13823 731 aaKnown RBP17.98■□□□□ 0.47
C11orf88-202ENST00000375618 MCTP1Q6DN14 999 aa17.98■□□□□ 0.47
C11orf88-202ENST00000375618 NCAPH2Q6IBW4 605 aa17.98■□□□□ 0.47
C11orf88-202ENST00000375618 MTHFD1LQ6UB35 978 aa17.98■□□□□ 0.47
C11orf88-202ENST00000375618 OTOP2Q7RTS6 562 aa17.98■□□□□ 0.47
C11orf88-202ENST00000375618 BBXQ8WY36 941 aaPredicted RBP17.98■□□□□ 0.47
C11orf88-202ENST00000375618 HERVK_113Q902F9 699 aa17.98■□□□□ 0.47
C11orf88-202ENST00000375618 TTC12Q9H892 705 aaPredicted RBP17.98■□□□□ 0.47
C11orf88-202ENST00000375618 RGL1Q9NZL6 768 aa17.98■□□□□ 0.47
C11orf88-202ENST00000375618 RSPH10B2B2RC85 870 aa17.97■□□□□ 0.47
C11orf88-202ENST00000375618 H3BQV1 296 aa17.97■□□□□ 0.47
C11orf88-202ENST00000375618 MARCH6O60337 910 aa17.97■□□□□ 0.47
C11orf88-202ENST00000375618 C22orf31O95567 290 aa17.97■□□□□ 0.47
C11orf88-202ENST00000375618 FGBP02675 491 aa17.97■□□□□ 0.47
C11orf88-202ENST00000375618 CXCL10P02778 98 aa17.97■□□□□ 0.47
C11orf88-202ENST00000375618 OATP04181 439 aa17.97■□□□□ 0.47
C11orf88-202ENST00000375618 RSPH10BP0C881 870 aa17.97■□□□□ 0.47
C11orf88-202ENST00000375618 RFC2P35250 354 aa17.97■□□□□ 0.47
C11orf88-202ENST00000375618 TXKP42681 527 aa17.97■□□□□ 0.47
C11orf88-202ENST00000375618 TRAPPC10P48553 1259 aa17.97■□□□□ 0.47
C11orf88-202ENST00000375618 MGAT3Q09327 533 aa17.97■□□□□ 0.47
C11orf88-202ENST00000375618 TARBP2Q15633 366 aaKnown RBP17.97■□□□□ 0.47
C11orf88-202ENST00000375618 ZNF484Q5JVG2 852 aa17.97■□□□□ 0.47
C11orf88-202ENST00000375618 FAM26DQ5JW98 314 aa17.97■□□□□ 0.47
C11orf88-202ENST00000375618 PSRC1Q6PGN9 363 aaPredicted RBP17.97■□□□□ 0.47
C11orf88-202ENST00000375618 RPAINQ86UA6 219 aa17.97■□□□□ 0.47
C11orf88-202ENST00000375618 SLFN12Q8IYM2 578 aa17.97■□□□□ 0.47
C11orf88-202ENST00000375618 INTS4Q96HW7 963 aaKnown RBP17.97■□□□□ 0.47
C11orf88-202ENST00000375618 CEP89Q96ST8 783 aa17.97■□□□□ 0.47
C11orf88-202ENST00000375618 SH2D3AQ9BRG2 576 aa17.97■□□□□ 0.47
C11orf88-202ENST00000375618 FAM49AQ9H0Q0 323 aaPredicted RBP17.97■□□□□ 0.47
C11orf88-202ENST00000375618 PCDHA2Q9Y5H9 948 aa17.97■□□□□ 0.47
C11orf88-202ENST00000375618 MYH9P35579 1960 aaKnown RBP17.97■□□□□ 0.47
C11orf88-202ENST00000375618 KAT6AQ92794 2004 aa17.96■□□□□ 0.47
C11orf88-202ENST00000375618 COL1A2P08123 1366 aa17.96■□□□□ 0.47
C11orf88-202ENST00000375618 POTEMA6NI47 508 aa17.96■□□□□ 0.47
C11orf88-202ENST00000375618 GRXCR1A8MXD5 290 aa17.96■□□□□ 0.47
C11orf88-202ENST00000375618 BAG4O95429 457 aaKnown RBP17.96■□□□□ 0.47
C11orf88-202ENST00000375618 EPHA7Q15375 998 aa17.96■□□□□ 0.47
C11orf88-202ENST00000375618 TAF2Q6P1X5 1199 aa17.96■□□□□ 0.47
C11orf88-202ENST00000375618 RPUSD2Q8IZ73 545 aaKnown RBP17.96■□□□□ 0.47
C11orf88-202ENST00000375618 DYDC2Q96IM9 177 aa17.96■□□□□ 0.47
C11orf88-202ENST00000375618 PCDHA12Q9UN75 941 aa17.96■□□□□ 0.47
C11orf88-202ENST00000375618 ZBTB39O15060 712 aa17.95■□□□□ 0.46
C11orf88-202ENST00000375618 CAND2O75155 1236 aa17.95■□□□□ 0.46
C11orf88-202ENST00000375618 OR52Z1P0C646 297 aa17.95■□□□□ 0.46
C11orf88-202ENST00000375618 PSMC5P62195 406 aa17.95■□□□□ 0.46
C11orf88-202ENST00000375618 TMEM62Q0P6H9 643 aa17.95■□□□□ 0.46
C11orf88-202ENST00000375618 CTTNQ14247 550 aaKnown RBP17.95■□□□□ 0.46
C11orf88-202ENST00000375618 PLA2G4FQ68DD2 849 aa17.95■□□□□ 0.46
C11orf88-202ENST00000375618 ANO5Q75V66 913 aa17.95■□□□□ 0.46
C11orf88-202ENST00000375618 KIAA0319LQ8IZA0 1049 aa17.95■□□□□ 0.46
C11orf88-202ENST00000375618 LINC01465Q8N7H1 131 aa17.95■□□□□ 0.46
C11orf88-202ENST00000375618 ZNF579Q8NAF0 562 aaKnown RBP17.95■□□□□ 0.46
C11orf88-202ENST00000375618 FAM167AQ96KS9 214 aa17.95■□□□□ 0.46
C11orf88-202ENST00000375618 FTOQ9C0B1 505 aaKnown RBP eCLIP17.95■□□□□ 0.46
C11orf88-202ENST00000375618 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.95■□□□□ 0.46
C11orf88-202ENST00000375618 NOL7Q9UMY1 257 aaKnown RBP17.95■□□□□ 0.46
C11orf88-202ENST00000375618 SMIM35A0A1B0GVV1 85 aa17.94■□□□□ 0.46
C11orf88-202ENST00000375618 PFKMP08237 780 aa17.94■□□□□ 0.46
C11orf88-202ENST00000375618 SYT1P21579 422 aa17.94■□□□□ 0.46
C11orf88-202ENST00000375618 QARSP47897 775 aaKnown RBP17.94■□□□□ 0.46
C11orf88-202ENST00000375618 MRPS6P82932 125 aaKnown RBP17.94■□□□□ 0.46
C11orf88-202ENST00000375618 CYP4A11Q02928 519 aa17.94■□□□□ 0.46
C11orf88-202ENST00000375618 ORC2Q13416 577 aaPredicted RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms