RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 EPHB1P54762 984 aa11.03□□□□□ -0.64
CD28-202ENST00000374481 RNF220Q5VTB9 566 aa11.03□□□□□ -0.64
CD28-202ENST00000374481 MYOCDQ8IZQ8 938 aa11.03□□□□□ -0.64
CD28-202ENST00000374481 ZNF444Q8N0Y2 327 aaPredicted RBP11.03□□□□□ -0.64
CD28-202ENST00000374481 DDX18Q9NVP1 670 aaKnown RBP11.03□□□□□ -0.64
CD28-202ENST00000374481 DNAAF2Q9NVR5 837 aaKnown RBP11.03□□□□□ -0.64
CD28-202ENST00000374481 MYO5CQ9NQX4 1742 aa11.02□□□□□ -0.64
CD28-202ENST00000374481 O00370 1275 aa11.02□□□□□ -0.64
CD28-202ENST00000374481 GIPC1O14908 333 aa11.02□□□□□ -0.64
CD28-202ENST00000374481 SLC5A1P13866 664 aa11.02□□□□□ -0.64
CD28-202ENST00000374481 SLC1A4P43007 532 aa11.02□□□□□ -0.64
CD28-202ENST00000374481 ARFIP2P53365 341 aa11.02□□□□□ -0.64
CD28-202ENST00000374481 DSG1Q02413 1049 aa11.02□□□□□ -0.64
CD28-202ENST00000374481 CBX3Q13185 183 aa11.02□□□□□ -0.64
CD28-202ENST00000374481 TMEM259Q4ZIN3 620 aa11.02□□□□□ -0.64
CD28-202ENST00000374481 SPICE1Q8N0Z3 855 aa11.02□□□□□ -0.64
CD28-202ENST00000374481 TRIM56Q9BRZ2 755 aaKnown RBP11.02□□□□□ -0.64
CD28-202ENST00000374481 ANAPC5Q9UJX4 755 aa11.02□□□□□ -0.64
CD28-202ENST00000374481 STX8Q9UNK0 236 aa11.02□□□□□ -0.64
CD28-202ENST00000374481 A0A0U1RQJ8 604 aa11.02□□□□□ -0.65
CD28-202ENST00000374481 FMNL1O95466 1100 aaPredicted RBP11.02□□□□□ -0.65
CD28-202ENST00000374481 OATP04181 439 aa11.02□□□□□ -0.65
CD28-202ENST00000374481 FAM153BP0C7A2 387 aa11.02□□□□□ -0.65
CD28-202ENST00000374481 HARSP12081 509 aaKnown RBP11.02□□□□□ -0.65
CD28-202ENST00000374481 PRLRP16471 622 aa11.02□□□□□ -0.65
CD28-202ENST00000374481 TXKP42681 527 aa11.02□□□□□ -0.65
CD28-202ENST00000374481 TBL3Q12788 808 aaKnown RBP11.02□□□□□ -0.65
CD28-202ENST00000374481 LLGL1Q15334 1064 aa11.02□□□□□ -0.65
CD28-202ENST00000374481 FAM153CQ494X1 144 aa11.02□□□□□ -0.65
CD28-202ENST00000374481 CTAGE3PQ8IX95 158 aa11.02□□□□□ -0.65
CD28-202ENST00000374481 OSBPL7Q9BZF2 842 aa11.02□□□□□ -0.65
CD28-202ENST00000374481 RXFP1Q9HBX9 757 aa11.02□□□□□ -0.65
CD28-202ENST00000374481 C6orf50Q9HD87 102 aa11.02□□□□□ -0.65
CD28-202ENST00000374481 METTL5Q9NRN9 209 aaKnown RBP11.02□□□□□ -0.65
CD28-202ENST00000374481 ABCF3Q9NUQ8 709 aa11.02□□□□□ -0.65
CD28-202ENST00000374481 FAM153AQ9UHL3 310 aa11.02□□□□□ -0.65
CD28-202ENST00000374481 ATP10DQ9P241 1426 aa11.02□□□□□ -0.65
CD28-202ENST00000374481 ITGB3BPQ13352 177 aaPredicted RBP11.02□□□□□ -0.65
CD28-202ENST00000374481 SLC4A8Q2Y0W8 1093 aa11.02□□□□□ -0.65
CD28-202ENST00000374481 KCTD21Q4G0X4 260 aa11.02□□□□□ -0.65
CD28-202ENST00000374481 ZNF654Q8IZM8 581 aa11.02□□□□□ -0.65
CD28-202ENST00000374481 FANCBQ8NB91 859 aa11.02□□□□□ -0.65
CD28-202ENST00000374481 UIMC1Q96RL1 719 aa11.02□□□□□ -0.65
CD28-202ENST00000374481 EIF2AQ9BY44 585 aaKnown RBP11.02□□□□□ -0.65
CD28-202ENST00000374481 ZBTB3Q9H5J0 574 aa11.02□□□□□ -0.65
CD28-202ENST00000374481 R3HDM2Q9Y2K5 976 aaKnown RBP11.02□□□□□ -0.65
CD28-202ENST00000374481 TMA7Q9Y2S6 64 aaKnown RBP11.02□□□□□ -0.65
CD28-202ENST00000374481 COMMD3-BMI1R4GMX3 469 aa11.02□□□□□ -0.65
CD28-202ENST00000374481 PRDM1O75626 825 aa11.01□□□□□ -0.65
CD28-202ENST00000374481 MBD4O95243 580 aa11.01□□□□□ -0.65
CD28-202ENST00000374481 IFNB1P01574 187 aa11.01□□□□□ -0.65
CD28-202ENST00000374481 TATP17735 454 aaPredicted RBP11.01□□□□□ -0.65
CD28-202ENST00000374481 FGFR4P22455 802 aa11.01□□□□□ -0.65
CD28-202ENST00000374481 DCTN2Q13561 401 aaKnown RBP11.01□□□□□ -0.65
CD28-202ENST00000374481 TRAIPQ9BWF2 469 aa11.01□□□□□ -0.65
CD28-202ENST00000374481 MRPL46Q9H2W6 279 aaKnown RBP11.01□□□□□ -0.65
CD28-202ENST00000374481 PARVBQ9HBI1 364 aa11.01□□□□□ -0.65
CD28-202ENST00000374481 SH3GLB1Q9Y371 365 aa11.01□□□□□ -0.65
CD28-202ENST00000374481 ZSCAN5CA6NGD5 496 aaPredicted RBP11.01□□□□□ -0.65
CD28-202ENST00000374481 FNTAP49354 379 aa11.01□□□□□ -0.65
CD28-202ENST00000374481 LMNB2Q03252 620 aa11.01□□□□□ -0.65
CD28-202ENST00000374481 CTDSPL2Q05D32 466 aa11.01□□□□□ -0.65
CD28-202ENST00000374481 MCL1Q07820 350 aa11.01□□□□□ -0.65
CD28-202ENST00000374481 ASPHQ12797 758 aa11.01□□□□□ -0.65
CD28-202ENST00000374481 THOC5Q13769 683 aaKnown RBP11.01□□□□□ -0.65
CD28-202ENST00000374481 SESTD1Q86VW0 696 aa11.01□□□□□ -0.65
CD28-202ENST00000374481 PALM2Q8IXS6 379 aa11.01□□□□□ -0.65
CD28-202ENST00000374481 TRIM11Q96F44 468 aa11.01□□□□□ -0.65
CD28-202ENST00000374481 PHACTR1Q9C0D0 580 aa11.01□□□□□ -0.65
CD28-202ENST00000374481 RIC8AQ9NPQ8 531 aa11.01□□□□□ -0.65
CD28-202ENST00000374481 CNGB3Q9NQW8 809 aa11.01□□□□□ -0.65
CD28-202ENST00000374481 TXNDC16Q9P2K2 825 aa11.01□□□□□ -0.65
CD28-202ENST00000374481 CAPN6Q9Y6Q1 641 aa11.01□□□□□ -0.65
CD28-202ENST00000374481 FANCAO15360 1455 aa11.01□□□□□ -0.65
CD28-202ENST00000374481 PITPNM2Q9BZ72 1349 aa11.01□□□□□ -0.65
CD28-202ENST00000374481 ATICP31939 592 aa11.01□□□□□ -0.65
CD28-202ENST00000374481 KRT81Q14533 505 aa11.01□□□□□ -0.65
CD28-202ENST00000374481 TMC4Q7Z404 712 aa11.01□□□□□ -0.65
CD28-202ENST00000374481 NUDCD3Q8IVD9 361 aa11.01□□□□□ -0.65
CD28-202ENST00000374481 FNBP1Q96RU3 617 aa11.01□□□□□ -0.65
CD28-202ENST00000374481 BABAM1Q9NWV8 329 aa11.01□□□□□ -0.65
CD28-202ENST00000374481 STRNO43815 780 aa11.01□□□□□ -0.65
CD28-202ENST00000374481 NPTXRO95502 500 aa11.01□□□□□ -0.65
CD28-202ENST00000374481 MCF2P10911 925 aa11.01□□□□□ -0.65
CD28-202ENST00000374481 XRCC5P13010 732 aaKnown RBP11.01□□□□□ -0.65
CD28-202ENST00000374481 VCAM1P19320 739 aa11.01□□□□□ -0.65
CD28-202ENST00000374481 OCA2Q04671 838 aa11.01□□□□□ -0.65
CD28-202ENST00000374481 CYTH1Q15438 398 aa11.01□□□□□ -0.65
CD28-202ENST00000374481 OGFOD1Q8N543 542 aa11.01□□□□□ -0.65
CD28-202ENST00000374481 USP38Q8NB14 1042 aa11.01□□□□□ -0.65
CD28-202ENST00000374481 DDHD1Q8NEL9 900 aa11.01□□□□□ -0.65
CD28-202ENST00000374481 SCG3Q8WXD2 468 aaKnown RBP11.01□□□□□ -0.65
CD28-202ENST00000374481 ATP2A3Q93084 1043 aa11.01□□□□□ -0.65
CD28-202ENST00000374481 EYA1Q99502 592 aa11.01□□□□□ -0.65
CD28-202ENST00000374481 FAM187AA6NFU0 413 aa11□□□□□ -0.65
CD28-202ENST00000374481 M0R2C6 588 aa11□□□□□ -0.65
CD28-202ENST00000374481 HOXB7P09629 217 aa11□□□□□ -0.65
CD28-202ENST00000374481 ST3GAL1Q11201 340 aa11□□□□□ -0.65
CD28-202ENST00000374481 MESDQ14696 234 aa11□□□□□ -0.65
CD28-202ENST00000374481 ARHGAP44Q17R89 818 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms