RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 LMBR1Q8WVP7 490 aa17.87■□□□□ 0.45
PFDN4-201ENST00000371419 BBXQ8WY36 941 aaPredicted RBP17.87■□□□□ 0.45
PFDN4-201ENST00000371419 USP28Q96RU2 1077 aa17.87■□□□□ 0.45
PFDN4-201ENST00000371419 EIF2AK1Q9BQI3 630 aaKnown RBP17.87■□□□□ 0.45
PFDN4-201ENST00000371419 FTOQ9C0B1 505 aaKnown RBP eCLIP17.87■□□□□ 0.45
PFDN4-201ENST00000371419 PRDM5Q9NQX1 630 aaPredicted RBP17.87■□□□□ 0.45
PFDN4-201ENST00000371419 PDLIM7Q9NR12 457 aa17.87■□□□□ 0.45
PFDN4-201ENST00000371419 TMEM39AQ9NV64 488 aa17.87■□□□□ 0.45
PFDN4-201ENST00000371419 RGL1Q9NZL6 768 aa17.87■□□□□ 0.45
PFDN4-201ENST00000371419 PRKAG2Q9UGJ0 569 aa17.87■□□□□ 0.45
PFDN4-201ENST00000371419 ZDHHC9Q9Y397 364 aa17.87■□□□□ 0.45
PFDN4-201ENST00000371419 WDR81Q562E7 1941 aa17.86■□□□□ 0.45
PFDN4-201ENST00000371419 RRN3P2A6NIE6 340 aa17.86■□□□□ 0.45
PFDN4-201ENST00000371419 OATP04181 439 aa17.86■□□□□ 0.45
PFDN4-201ENST00000371419 ZNF200P98182 395 aaPredicted RBP17.86■□□□□ 0.45
PFDN4-201ENST00000371419 PRKCEQ02156 737 aa17.86■□□□□ 0.45
PFDN4-201ENST00000371419 CEBPZQ03701 1054 aaKnown RBP17.86■□□□□ 0.45
PFDN4-201ENST00000371419 HIC1Q14526 733 aa17.86■□□□□ 0.45
PFDN4-201ENST00000371419 GRIK4Q16099 956 aa17.86■□□□□ 0.45
PFDN4-201ENST00000371419 IL17AQ16552 155 aa17.86■□□□□ 0.45
PFDN4-201ENST00000371419 IGSF22Q8N9C0 903 aa17.86■□□□□ 0.45
PFDN4-201ENST00000371419 ERMNQ8TAM6 284 aa17.86■□□□□ 0.45
PFDN4-201ENST00000371419 DYDC2Q96IM9 177 aa17.86■□□□□ 0.45
PFDN4-201ENST00000371419 HSD17B14Q9BPX1 270 aa17.86■□□□□ 0.45
PFDN4-201ENST00000371419 LXNQ9BS40 222 aa17.86■□□□□ 0.45
PFDN4-201ENST00000371419 NRBP2Q9NSY0 501 aa17.86■□□□□ 0.45
PFDN4-201ENST00000371419 LRWD1Q9UFC0 647 aa17.86■□□□□ 0.45
PFDN4-201ENST00000371419 CEP290O15078 2479 aa17.86■□□□□ 0.45
PFDN4-201ENST00000371419 KAT6AQ92794 2004 aa17.85■□□□□ 0.45
PFDN4-201ENST00000371419 KIAA0355O15063 1070 aa17.85■□□□□ 0.45
PFDN4-201ENST00000371419 TRAK2O60296 914 aa17.85■□□□□ 0.45
PFDN4-201ENST00000371419 SLITRK3O94933 977 aa17.85■□□□□ 0.45
PFDN4-201ENST00000371419 IGBP1P78318 339 aa17.85■□□□□ 0.45
PFDN4-201ENST00000371419 CYP4A11Q02928 519 aa17.85■□□□□ 0.45
PFDN4-201ENST00000371419 PTPAQ15257 358 aa17.85■□□□□ 0.45
PFDN4-201ENST00000371419 XKR3Q5GH77 459 aa17.85■□□□□ 0.45
PFDN4-201ENST00000371419 ZNF484Q5JVG2 852 aa17.85■□□□□ 0.45
PFDN4-201ENST00000371419 TRMT1LQ7Z2T5 733 aaKnown RBP17.85■□□□□ 0.45
PFDN4-201ENST00000371419 ZSWIM4Q9H7M6 989 aa17.85■□□□□ 0.45
PFDN4-201ENST00000371419 TBX21Q9UL17 535 aa17.85■□□□□ 0.45
PFDN4-201ENST00000371419 STK24Q9Y6E0 443 aa17.85■□□□□ 0.45
PFDN4-201ENST00000371419 COL1A2P08123 1366 aa17.84■□□□□ 0.45
PFDN4-201ENST00000371419 VWA3AA6NCI4 1184 aa17.84■□□□□ 0.45
PFDN4-201ENST00000371419 TRIM43BA6NCK2 446 aa17.84■□□□□ 0.45
PFDN4-201ENST00000371419 TREHO43280 583 aa17.84■□□□□ 0.45
PFDN4-201ENST00000371419 CYP2C9P11712 490 aa17.84■□□□□ 0.45
PFDN4-201ENST00000371419 DEKP35659 375 aaKnown RBP17.84■□□□□ 0.45
PFDN4-201ENST00000371419 NASPP49321 788 aaPredicted RBP17.84■□□□□ 0.45
PFDN4-201ENST00000371419 ADAM17P78536 824 aa17.84■□□□□ 0.45
PFDN4-201ENST00000371419 CTTNQ14247 550 aaKnown RBP17.84■□□□□ 0.45
PFDN4-201ENST00000371419 FOXD4L6Q3SYB3 417 aaPredicted RBP17.84■□□□□ 0.45
PFDN4-201ENST00000371419 ATL3Q6DD88 541 aa17.84■□□□□ 0.45
PFDN4-201ENST00000371419 FOXD4L3Q6VB84 417 aaPredicted RBP17.84■□□□□ 0.45
PFDN4-201ENST00000371419 SH3RF1Q7Z6J0 888 aa17.84■□□□□ 0.45
PFDN4-201ENST00000371419 TPH2Q8IWU9 490 aa17.84■□□□□ 0.45
PFDN4-201ENST00000371419 C4orf19Q8IY42 314 aa17.84■□□□□ 0.45
PFDN4-201ENST00000371419 TRIM43Q96BQ3 446 aaPredicted RBP17.84■□□□□ 0.45
PFDN4-201ENST00000371419 CTAGE1Q96RT6 745 aa17.84■□□□□ 0.45
PFDN4-201ENST00000371419 ZMYND8Q9ULU4 1186 aaPredicted RBP17.84■□□□□ 0.45
PFDN4-201ENST00000371419 STBD1O95210 358 aa17.83■□□□□ 0.45
PFDN4-201ENST00000371419 PTK7Q13308 1070 aa17.83■□□□□ 0.45
PFDN4-201ENST00000371419 SLC39A14Q15043 492 aa17.83■□□□□ 0.45
PFDN4-201ENST00000371419 MARCH8Q5T0T0 291 aa17.83■□□□□ 0.45
PFDN4-201ENST00000371419 HAUS3Q68CZ6 603 aa17.83■□□□□ 0.45
PFDN4-201ENST00000371419 SERINC5Q86VE9 423 aa17.83■□□□□ 0.45
PFDN4-201ENST00000371419 POLR3CQ9BUI4 534 aaPredicted RBP17.83■□□□□ 0.45
PFDN4-201ENST00000371419 TUFT1Q9NNX1 390 aa17.83■□□□□ 0.45
PFDN4-201ENST00000371419 WRAP73Q9P2S5 460 aaPredicted RBP17.83■□□□□ 0.45
PFDN4-201ENST00000371419 TFIP11Q9UBB9 837 aaKnown RBP17.83■□□□□ 0.45
PFDN4-201ENST00000371419 SEPT9Q9UHD8 586 aaPredicted RBP17.83■□□□□ 0.45
PFDN4-201ENST00000371419 TUBE1Q9UJT0 475 aa17.83■□□□□ 0.45
PFDN4-201ENST00000371419 ATP6V1DQ9Y5K8 247 aa17.83■□□□□ 0.45
PFDN4-201ENST00000371419 MORC2Q9Y6X9 1032 aaPredicted RBP17.83■□□□□ 0.45
PFDN4-201ENST00000371419 TRIP12Q14669 1992 aaPredicted RBP17.83■□□□□ 0.44
PFDN4-201ENST00000371419 MYH15Q9Y2K3 1946 aa17.83■□□□□ 0.44
PFDN4-201ENST00000371419 MBLAC1A4D2B0 266 aaPredicted RBP17.82■□□□□ 0.44
PFDN4-201ENST00000371419 ZBTB42B2RXF5 422 aa17.82■□□□□ 0.44
PFDN4-201ENST00000371419 LYPLA2O95372 231 aa17.82■□□□□ 0.44
PFDN4-201ENST00000371419 SPATA31C1P0DKV0 1188 aa17.82■□□□□ 0.44
PFDN4-201ENST00000371419 SYN1P17600 705 aa17.82■□□□□ 0.44
PFDN4-201ENST00000371419 RPA1P27694 616 aa17.82■□□□□ 0.44
PFDN4-201ENST00000371419 STK38Q15208 465 aa17.82■□□□□ 0.44
PFDN4-201ENST00000371419 CATSPER3Q86XQ3 398 aa17.82■□□□□ 0.44
PFDN4-201ENST00000371419 CCDC155Q8N6L0 562 aa17.82■□□□□ 0.44
PFDN4-201ENST00000371419 TRAPPC12Q8WVT3 735 aa17.82■□□□□ 0.44
PFDN4-201ENST00000371419 NIFKQ9BYG3 293 aaKnown RBP17.82■□□□□ 0.44
PFDN4-201ENST00000371419 HIPK3Q9H422 1215 aa17.82■□□□□ 0.44
PFDN4-201ENST00000371419 MED24O75448 989 aa17.82■□□□□ 0.44
PFDN4-201ENST00000371419 RAG1P15918 1043 aa17.82■□□□□ 0.44
PFDN4-201ENST00000371419 MARCKSP29966 332 aaPredicted RBP17.82■□□□□ 0.44
PFDN4-201ENST00000371419 YWHABP31946 246 aaKnown RBP17.82■□□□□ 0.44
PFDN4-201ENST00000371419 CCT6AP40227 531 aaKnown RBP17.82■□□□□ 0.44
PFDN4-201ENST00000371419 BFSP2Q13515 415 aa17.82■□□□□ 0.44
PFDN4-201ENST00000371419 KRT79Q5XKE5 535 aa17.82■□□□□ 0.44
PFDN4-201ENST00000371419 TAF2Q6P1X5 1199 aa17.82■□□□□ 0.44
PFDN4-201ENST00000371419 ANO5Q75V66 913 aa17.82■□□□□ 0.44
PFDN4-201ENST00000371419 OTUD6AQ7L8S5 288 aa17.82■□□□□ 0.44
PFDN4-201ENST00000371419 LINC00301Q8NCQ3 95 aa17.82■□□□□ 0.44
PFDN4-201ENST00000371419 CAGE1Q8TC20 777 aa17.82■□□□□ 0.44
PFDN4-201ENST00000371419 SNX29Q8TEQ0 813 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms