RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 SCN5AQ14524 2016 aa20.86■□□□□ 0.93
CHTOP-202ENST00000368687 RSPH10B2B2RC85 870 aa20.85■□□□□ 0.93
CHTOP-202ENST00000368687 CHMP2AO43633 222 aa20.85■□□□□ 0.93
CHTOP-202ENST00000368687 EFCAB14O75071 495 aa20.85■□□□□ 0.93
CHTOP-202ENST00000368687 BAIAP3O94812 1187 aa20.85■□□□□ 0.93
CHTOP-202ENST00000368687 RSPH10BP0C881 870 aa20.85■□□□□ 0.93
CHTOP-202ENST00000368687 U2AF2P26368 475 aaKnown RBP eCLIP20.85■□□□□ 0.933e-20■■■■□ 24.3
CHTOP-202ENST00000368687 SMAD3P84022 425 aaKnown RBP20.85■□□□□ 0.93
CHTOP-202ENST00000368687 HIC1Q14526 733 aa20.85■□□□□ 0.93
CHTOP-202ENST00000368687 C16orf59Q7L2K0 433 aa20.85■□□□□ 0.93
CHTOP-202ENST00000368687 NRBP2Q9NSY0 501 aa20.85■□□□□ 0.93
CHTOP-202ENST00000368687 GABBR1Q9UBS5 961 aa20.85■□□□□ 0.93
CHTOP-202ENST00000368687 COL6A3P12111 3177 aa20.85■□□□□ 0.93
CHTOP-202ENST00000368687 H3BQV1 296 aa20.84■□□□□ 0.93
CHTOP-202ENST00000368687 CXCL10P02778 98 aa20.84■□□□□ 0.93
CHTOP-202ENST00000368687 ACRP10323 421 aa20.84■□□□□ 0.93
CHTOP-202ENST00000368687 GJB2P29033 226 aa20.84■□□□□ 0.93
CHTOP-202ENST00000368687 CUL4AQ13619 759 aa20.84■□□□□ 0.93
CHTOP-202ENST00000368687 CALCRLQ16602 461 aa20.84■□□□□ 0.93
CHTOP-202ENST00000368687 ZNF618Q5T7W0 954 aa20.84■□□□□ 0.93
CHTOP-202ENST00000368687 RASIP1Q5U651 963 aa20.84■□□□□ 0.93
CHTOP-202ENST00000368687 FAM43BQ6ZT52 329 aaPredicted RBP20.84■□□□□ 0.93
CHTOP-202ENST00000368687 POTEDQ86YR6 584 aa20.84■□□□□ 0.93
CHTOP-202ENST00000368687 UIMC1Q96RL1 719 aa20.84■□□□□ 0.93
CHTOP-202ENST00000368687 FTOQ9C0B1 505 aaKnown RBP eCLIP20.84■□□□□ 0.93
CHTOP-202ENST00000368687 PCDHA2Q9Y5H9 948 aa20.84■□□□□ 0.93
CHTOP-202ENST00000368687 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.83■□□□□ 0.93
CHTOP-202ENST00000368687 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.83■□□□□ 0.93
CHTOP-202ENST00000368687 FAM205CA6NFA0 338 aa20.83■□□□□ 0.93
CHTOP-202ENST00000368687 M0QZ92 97 aa20.83■□□□□ 0.93
CHTOP-202ENST00000368687 PDCP20941 246 aa20.83■□□□□ 0.93
CHTOP-202ENST00000368687 IGBP1P78318 339 aa20.83■□□□□ 0.93
CHTOP-202ENST00000368687 FAM26DQ5JW98 314 aa20.83■□□□□ 0.93
CHTOP-202ENST00000368687 MARCH8Q5T0T0 291 aa20.83■□□□□ 0.93
CHTOP-202ENST00000368687 DEFB128Q7Z7B8 93 aa20.83■□□□□ 0.93
CHTOP-202ENST00000368687 ZNF710Q8N1W2 664 aa20.83■□□□□ 0.93
CHTOP-202ENST00000368687 NME8Q8N427 588 aa20.83■□□□□ 0.93
CHTOP-202ENST00000368687 DEFB123Q8N688 67 aa20.83■□□□□ 0.93
CHTOP-202ENST00000368687 VAV3Q9UKW4 847 aa20.83■□□□□ 0.93
CHTOP-202ENST00000368687 SMIM35A0A1B0GVV1 85 aa20.82■□□□□ 0.92
CHTOP-202ENST00000368687 MAGEB2O15479 319 aa20.82■□□□□ 0.92
CHTOP-202ENST00000368687 OATP04181 439 aa20.82■□□□□ 0.92
CHTOP-202ENST00000368687 PRKCEQ02156 737 aa20.82■□□□□ 0.92
CHTOP-202ENST00000368687 IER5Q5VY09 327 aa20.82■□□□□ 0.92
CHTOP-202ENST00000368687 CNKSR3Q6P9H4 555 aa20.82■□□□□ 0.92
CHTOP-202ENST00000368687 HAS1Q92839 578 aa20.82■□□□□ 0.92
CHTOP-202ENST00000368687 WNT8BQ93098 351 aa20.82■□□□□ 0.92
CHTOP-202ENST00000368687 INTS4Q96HW7 963 aaKnown RBP20.82■□□□□ 0.92
CHTOP-202ENST00000368687 PCDHA12Q9UN75 941 aa20.82■□□□□ 0.92
CHTOP-202ENST00000368687 PSMC5P62195 406 aa20.81■□□□□ 0.92
CHTOP-202ENST00000368687 XKR3Q5GH77 459 aa20.81■□□□□ 0.92
CHTOP-202ENST00000368687 TRAF7Q6Q0C0 670 aa20.81■□□□□ 0.92
CHTOP-202ENST00000368687 MTHFD1LQ6UB35 978 aa20.81■□□□□ 0.92
CHTOP-202ENST00000368687 OTOP2Q7RTS6 562 aa20.81■□□□□ 0.92
CHTOP-202ENST00000368687 NEK9Q8TD19 979 aa20.81■□□□□ 0.92
CHTOP-202ENST00000368687 PPME1Q9Y570 386 aa20.81■□□□□ 0.92
CHTOP-202ENST00000368687 SLC4A7Q9Y6M7 1214 aa20.81■□□□□ 0.92
CHTOP-202ENST00000368687 TET1Q8NFU7 2136 aa20.81■□□□□ 0.92
CHTOP-202ENST00000368687 ABHD14A-ACY1A0A1B0GW23 586 aa20.8■□□□□ 0.92
CHTOP-202ENST00000368687 K7ELQ4 463 aaPredicted RBP20.8■□□□□ 0.92
CHTOP-202ENST00000368687 P4HBP07237 508 aaKnown RBP20.8■□□□□ 0.92
CHTOP-202ENST00000368687 ATP4AP20648 1035 aa20.8■□□□□ 0.92
CHTOP-202ENST00000368687 QARSP47897 775 aaKnown RBP20.8■□□□□ 0.92
CHTOP-202ENST00000368687 PHOSPHO2Q8TCD6 241 aa20.8■□□□□ 0.92
CHTOP-202ENST00000368687 APBB2Q92870 758 aa20.8■□□□□ 0.92
CHTOP-202ENST00000368687 GJA10Q969M2 543 aa20.8■□□□□ 0.92
CHTOP-202ENST00000368687 SNX21Q969T3 373 aa20.8■□□□□ 0.92
CHTOP-202ENST00000368687 SLC9A7Q96T83 725 aa20.8■□□□□ 0.92
CHTOP-202ENST00000368687 SQORQ9Y6N5 450 aa20.8■□□□□ 0.92
CHTOP-202ENST00000368687 TMEM265A0A087WTH1 108 aa20.79■□□□□ 0.92
CHTOP-202ENST00000368687 ZBBXA8MT70 800 aa20.79■□□□□ 0.92
CHTOP-202ENST00000368687 NBNO60934 754 aa20.79■□□□□ 0.92
CHTOP-202ENST00000368687 KLRC1P26715 233 aa20.79■□□□□ 0.92
CHTOP-202ENST00000368687 TMOD1P28289 359 aa20.79■□□□□ 0.92
CHTOP-202ENST00000368687 MCM7P33993 719 aa20.79■□□□□ 0.92
CHTOP-202ENST00000368687 KCNJ6P48051 423 aa20.79■□□□□ 0.92
CHTOP-202ENST00000368687 MRPS6P82932 125 aaKnown RBP20.79■□□□□ 0.92
CHTOP-202ENST00000368687 IKBKEQ14164 716 aa20.79■□□□□ 0.92
CHTOP-202ENST00000368687 EPHA7Q15375 998 aa20.79■□□□□ 0.92
CHTOP-202ENST00000368687 RILPL1Q5EBL4 403 aa20.79■□□□□ 0.92
CHTOP-202ENST00000368687 TTC38Q5R3I4 469 aa20.79■□□□□ 0.92
CHTOP-202ENST00000368687 LARP1BQ659C4 914 aaKnown RBP20.79■□□□□ 0.92
CHTOP-202ENST00000368687 FAM109BQ6ICB4 259 aaPredicted RBP20.79■□□□□ 0.92
CHTOP-202ENST00000368687 RUFY4Q6ZNE9 571 aa20.79■□□□□ 0.92
CHTOP-202ENST00000368687 EXOC8Q8IYI6 725 aa20.79■□□□□ 0.92
CHTOP-202ENST00000368687 USP38Q8NB14 1042 aa20.79■□□□□ 0.92
CHTOP-202ENST00000368687 SEPT8Q92599 483 aa20.79■□□□□ 0.92
CHTOP-202ENST00000368687 MTMR9Q96QG7 549 aa20.79■□□□□ 0.92
CHTOP-202ENST00000368687 TTC12Q9H892 705 aaPredicted RBP20.79■□□□□ 0.92
CHTOP-202ENST00000368687 MTMR10Q9NXD2 777 aa20.79■□□□□ 0.92
CHTOP-202ENST00000368687 ZBTB42B2RXF5 422 aa20.78■□□□□ 0.92
CHTOP-202ENST00000368687 LAD1O00515 517 aa20.78■□□□□ 0.92
CHTOP-202ENST00000368687 ZNF862O60290 1169 aa20.78■□□□□ 0.92
CHTOP-202ENST00000368687 CTSHP09668 335 aa20.78■□□□□ 0.92
CHTOP-202ENST00000368687 RAB30Q15771 203 aa20.78■□□□□ 0.92
CHTOP-202ENST00000368687 MCTP1Q6DN14 999 aa20.78■□□□□ 0.92
CHTOP-202ENST00000368687 DNAJB3Q8WWF6 145 aa20.78■□□□□ 0.92
CHTOP-202ENST00000368687 VWCEQ96DN2 955 aa20.78■□□□□ 0.92
CHTOP-202ENST00000368687 JPH2Q9BR39 696 aaPredicted RBP20.78■□□□□ 0.92
CHTOP-202ENST00000368687 NIFKQ9BYG3 293 aaKnown RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms