RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 LCE2DQ5TA82 110 aaPredicted RBP12.18□□□□□ -0.46
TUBE1-201ENST00000368657 MYSM1Q5VVJ2 828 aa12.18□□□□□ -0.46
TUBE1-201ENST00000368657 LAIR1Q6GTX8 287 aa12.18□□□□□ -0.46
TUBE1-201ENST00000368657 KCNV1Q6PIU1 500 aa12.18□□□□□ -0.46
TUBE1-201ENST00000368657 TMC7Q7Z402 723 aa12.18□□□□□ -0.46
TUBE1-201ENST00000368657 MRPL43Q8N983 215 aaKnown RBP12.18□□□□□ -0.46
TUBE1-201ENST00000368657 PJA1Q8NG27 643 aa12.18□□□□□ -0.46
TUBE1-201ENST00000368657 NEDD1Q8NHV4 660 aa12.18□□□□□ -0.46
TUBE1-201ENST00000368657 SHDQ96IW2 340 aa12.18□□□□□ -0.46
TUBE1-201ENST00000368657 SPATA33Q96N06 139 aa12.18□□□□□ -0.46
TUBE1-201ENST00000368657 FAM126AQ9BYI3 521 aaPredicted RBP12.18□□□□□ -0.46
TUBE1-201ENST00000368657 SPATA6Q9NWH7 488 aaPredicted RBP12.18□□□□□ -0.46
TUBE1-201ENST00000368657 MRVI1Q9Y6F6 885 aa12.18□□□□□ -0.46
TUBE1-201ENST00000368657 RETP07949 1114 aa12.17□□□□□ -0.46
TUBE1-201ENST00000368657 TSPY3P0CV98 308 aa12.17□□□□□ -0.46
TUBE1-201ENST00000368657 TSPY8P0CW00 308 aa12.17□□□□□ -0.46
TUBE1-201ENST00000368657 ADD2P35612 726 aa12.17□□□□□ -0.46
TUBE1-201ENST00000368657 KRT17Q04695 432 aa12.17□□□□□ -0.46
TUBE1-201ENST00000368657 APOBRQ0VD83 1088 aa12.17□□□□□ -0.46
TUBE1-201ENST00000368657 BMS1Q14692 1282 aaKnown RBP12.17□□□□□ -0.46
TUBE1-201ENST00000368657 CSRP2Q16527 193 aa12.17□□□□□ -0.46
TUBE1-201ENST00000368657 FBXO47Q5MNV8 452 aa12.17□□□□□ -0.46
TUBE1-201ENST00000368657 GIMAP6Q6P9H5 292 aa12.17□□□□□ -0.46
TUBE1-201ENST00000368657 BTNL9Q6UXG8 535 aa12.17□□□□□ -0.46
TUBE1-201ENST00000368657 TSHZ1Q6ZSZ6 1077 aa12.17□□□□□ -0.46
TUBE1-201ENST00000368657 CCDC149Q6ZUS6 474 aa12.17□□□□□ -0.46
TUBE1-201ENST00000368657 RSPH3Q86UC2 560 aa12.17□□□□□ -0.46
TUBE1-201ENST00000368657 STK11IPQ8N1F8 1099 aa12.17□□□□□ -0.46
TUBE1-201ENST00000368657 SLC44A3Q8N4M1 653 aa12.17□□□□□ -0.46
TUBE1-201ENST00000368657 COLGALT1Q8NBJ5 622 aa12.17□□□□□ -0.46
TUBE1-201ENST00000368657 SEMA4GQ9NTN9 838 aa12.17□□□□□ -0.46
TUBE1-201ENST00000368657 SETD4Q9NVD3 440 aa12.17□□□□□ -0.46
TUBE1-201ENST00000368657 SQORQ9Y6N5 450 aa12.17□□□□□ -0.46
TUBE1-201ENST00000368657 UNC79Q9P2D8 2635 aa12.17□□□□□ -0.46
TUBE1-201ENST00000368657 MINDY4BA8MYZ0 360 aa12.16□□□□□ -0.46
TUBE1-201ENST00000368657 GOLIM4O00461 696 aa12.16□□□□□ -0.46
TUBE1-201ENST00000368657 CLASP2O75122 1294 aaKnown RBP12.16□□□□□ -0.46
TUBE1-201ENST00000368657 SCG2P13521 617 aa12.16□□□□□ -0.46
TUBE1-201ENST00000368657 MAGEA9P43362 315 aa12.16□□□□□ -0.46
TUBE1-201ENST00000368657 STARD6P59095 220 aa12.16□□□□□ -0.46
TUBE1-201ENST00000368657 ADAM17P78536 824 aa12.16□□□□□ -0.46
TUBE1-201ENST00000368657 SMC1AQ14683 1233 aaKnown RBP12.16□□□□□ -0.46
TUBE1-201ENST00000368657 HSDL1Q3SXM5 330 aa12.16□□□□□ -0.46
TUBE1-201ENST00000368657 SOWAHCQ53LP3 525 aaPredicted RBP12.16□□□□□ -0.46
TUBE1-201ENST00000368657 CELF3Q5SZQ8 465 aaKnown RBP12.16□□□□□ -0.46
TUBE1-201ENST00000368657 TAF2Q6P1X5 1199 aa12.16□□□□□ -0.46
TUBE1-201ENST00000368657 DCLRE1AQ6PJP8 1040 aa12.16□□□□□ -0.46
TUBE1-201ENST00000368657 PRR23CQ6ZRP0 262 aa12.16□□□□□ -0.46
TUBE1-201ENST00000368657 CELF5Q8N6W0 485 aaKnown RBP12.16□□□□□ -0.46
TUBE1-201ENST00000368657 C12orf76Q8N812 135 aaPredicted RBP12.16□□□□□ -0.46
TUBE1-201ENST00000368657 SSH3Q8TE77 659 aa12.16□□□□□ -0.46
TUBE1-201ENST00000368657 CHMP4CQ96CF2 233 aa12.16□□□□□ -0.46
TUBE1-201ENST00000368657 USP26Q9BXU7 913 aa12.16□□□□□ -0.46
TUBE1-201ENST00000368657 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.16□□□□□ -0.46
TUBE1-201ENST00000368657 ARHGEF3Q9NR81 526 aa12.16□□□□□ -0.46
TUBE1-201ENST00000368657 NOP58Q9Y2X3 529 aaKnown RBP12.16□□□□□ -0.46
TUBE1-201ENST00000368657 PCDHB7Q9Y5E2 793 aa12.16□□□□□ -0.46
TUBE1-201ENST00000368657 KIAA1217Q5T5P2 1943 aa12.15□□□□□ -0.46
TUBE1-201ENST00000368657 TM4SF5O14894 197 aa12.15□□□□□ -0.46
TUBE1-201ENST00000368657 LAG3P18627 525 aa12.15□□□□□ -0.46
TUBE1-201ENST00000368657 LIMK1P53667 647 aa12.15□□□□□ -0.46
TUBE1-201ENST00000368657 MGAT3Q09327 533 aa12.15□□□□□ -0.46
TUBE1-201ENST00000368657 UBE3CQ15386 1083 aa12.15□□□□□ -0.46
TUBE1-201ENST00000368657 PRR23BQ6ZRT6 265 aa12.15□□□□□ -0.46
TUBE1-201ENST00000368657 GPR149Q86SP6 731 aa12.15□□□□□ -0.46
TUBE1-201ENST00000368657 GPR152Q8TDT2 470 aa12.15□□□□□ -0.46
TUBE1-201ENST00000368657 LINC01599Q8WXQ3 324 aa12.15□□□□□ -0.46
TUBE1-201ENST00000368657 OSBPL6Q9BZF3 934 aa12.15□□□□□ -0.46
TUBE1-201ENST00000368657 TYW1Q9NV66 732 aaKnown RBP12.15□□□□□ -0.46
TUBE1-201ENST00000368657 CNOT1A5YKK6 2376 aaKnown RBP12.15□□□□□ -0.46
TUBE1-201ENST00000368657 C2orf71A6NGG8 1288 aa12.14□□□□□ -0.47
TUBE1-201ENST00000368657 TBKBP1A7MCY6 615 aa12.14□□□□□ -0.47
TUBE1-201ENST00000368657 TGFB3P10600 412 aa12.14□□□□□ -0.47
TUBE1-201ENST00000368657 GATMP50440 423 aa12.14□□□□□ -0.47
TUBE1-201ENST00000368657 ATP8B2P98198 1209 aa12.14□□□□□ -0.47
TUBE1-201ENST00000368657 SYDE2Q5VT97 1194 aa12.14□□□□□ -0.47
TUBE1-201ENST00000368657 DCAF4Q8WV16 495 aa12.14□□□□□ -0.47
TUBE1-201ENST00000368657 TAAR1Q96RJ0 339 aa12.14□□□□□ -0.47
TUBE1-201ENST00000368657 MFRPQ9BY79 579 aa12.14□□□□□ -0.47
TUBE1-201ENST00000368657 PLIN4Q96Q06 1357 aa12.14□□□□□ -0.47
TUBE1-201ENST00000368657 NAV2Q8IVL1 2488 aa12.14□□□□□ -0.47
TUBE1-201ENST00000368657 NRCAMQ92823 1304 aa12.13□□□□□ -0.47
TUBE1-201ENST00000368657 GDF9O60383 454 aa12.13□□□□□ -0.47
TUBE1-201ENST00000368657 PRDM1O75626 825 aa12.13□□□□□ -0.47
TUBE1-201ENST00000368657 RPLP2P05387 115 aaKnown RBP12.13□□□□□ -0.47
TUBE1-201ENST00000368657 CD52P31358 61 aa12.13□□□□□ -0.47
TUBE1-201ENST00000368657 PPM1AP35813 382 aa12.13□□□□□ -0.47
TUBE1-201ENST00000368657 NRLP54845 237 aa12.13□□□□□ -0.47
TUBE1-201ENST00000368657 ARHGAP4P98171 946 aa12.13□□□□□ -0.47
TUBE1-201ENST00000368657 TFAP4Q01664 338 aa12.13□□□□□ -0.47
TUBE1-201ENST00000368657 PTPN14Q15678 1187 aa12.13□□□□□ -0.47
TUBE1-201ENST00000368657 LETM2Q2VYF4 491 aa12.13□□□□□ -0.47
TUBE1-201ENST00000368657 KANK3Q6NY19 840 aa12.13□□□□□ -0.47
TUBE1-201ENST00000368657 TMC5Q6UXY8 1006 aa12.13□□□□□ -0.47
TUBE1-201ENST00000368657 TMEM87AQ8NBN3 555 aa12.13□□□□□ -0.47
TUBE1-201ENST00000368657 GLG1Q92896 1179 aa12.13□□□□□ -0.47
TUBE1-201ENST00000368657 RMDN3Q96TC7 470 aa12.13□□□□□ -0.47
TUBE1-201ENST00000368657 DNAJC2Q99543 621 aaKnown RBP12.13□□□□□ -0.47
TUBE1-201ENST00000368657 FOXQ1Q9C009 403 aa12.13□□□□□ -0.47
TUBE1-201ENST00000368657 AGO3Q9H9G7 860 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms