RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 POTEGQ6S5H5 508 aa11.22□□□□□ -0.61
TPM3-209ENST00000368527 POTEEQ6S8J3 1075 aa11.22□□□□□ -0.61
TPM3-209ENST00000368527 ADAMTSL1Q8N6G6 1762 aa11.22□□□□□ -0.61
TPM3-209ENST00000368527 EIF1ADQ8N9N8 165 aaKnown RBP11.22□□□□□ -0.61
TPM3-209ENST00000368527 PNKPQ96T60 521 aa11.22□□□□□ -0.61
TPM3-209ENST00000368527 HSD17B14Q9BPX1 270 aa11.22□□□□□ -0.61
TPM3-209ENST00000368527 REEP2Q9BRK0 252 aa11.22□□□□□ -0.61
TPM3-209ENST00000368527 GANQ9H2C0 597 aa11.22□□□□□ -0.61
TPM3-209ENST00000368527 PARVGQ9HBI0 331 aa11.22□□□□□ -0.61
TPM3-209ENST00000368527 ABCB6Q9NP58 842 aa11.22□□□□□ -0.61
TPM3-209ENST00000368527 ZNF70Q9UC06 446 aaPredicted RBP11.22□□□□□ -0.61
TPM3-209ENST00000368527 TRIM10Q9UDY6 481 aa11.22□□□□□ -0.61
TPM3-209ENST00000368527 PRDM4Q9UKN5 801 aa11.22□□□□□ -0.61
TPM3-209ENST00000368527 ZBTB21Q9ULJ3 1066 aa11.22□□□□□ -0.61
TPM3-209ENST00000368527 FRMPD4Q14CM0 1322 aa11.21□□□□□ -0.61
TPM3-209ENST00000368527 A0A0A6YYK5 440 aaPredicted RBP11.21□□□□□ -0.61
TPM3-209ENST00000368527 SHTN1A0MZ66 631 aa11.21□□□□□ -0.61
TPM3-209ENST00000368527 RCCD1A6NED2 376 aa11.21□□□□□ -0.61
TPM3-209ENST00000368527 FAM86B1E9PN63 330 aa11.21□□□□□ -0.61
TPM3-209ENST00000368527 GAS7O60861 476 aa11.21□□□□□ -0.61
TPM3-209ENST00000368527 NOL4O94818 638 aa11.21□□□□□ -0.61
TPM3-209ENST00000368527 NR3C1P04150 777 aa11.21□□□□□ -0.61
TPM3-209ENST00000368527 FAM86B2P0C5J1 330 aa11.21□□□□□ -0.61
TPM3-209ENST00000368527 GUCY2CP25092 1073 aa11.21□□□□□ -0.61
TPM3-209ENST00000368527 ZNF131P52739 623 aa11.21□□□□□ -0.61
TPM3-209ENST00000368527 CACNB3P54284 484 aa11.21□□□□□ -0.61
TPM3-209ENST00000368527 POLR2FP61218 127 aaKnown RBP11.21□□□□□ -0.61
TPM3-209ENST00000368527 MAP3K10Q02779 954 aa11.21□□□□□ -0.61
TPM3-209ENST00000368527 PABPC4Q13310 644 aaKnown RBP eCLIP11.21□□□□□ -0.61
TPM3-209ENST00000368527 USH1GQ495M9 461 aa11.21□□□□□ -0.61
TPM3-209ENST00000368527 CEP55Q53EZ4 464 aa11.21□□□□□ -0.61
TPM3-209ENST00000368527 EMBQ6PCB8 327 aa11.21□□□□□ -0.61
TPM3-209ENST00000368527 OTOP1Q7RTM1 612 aa11.21□□□□□ -0.61
TPM3-209ENST00000368527 SFR1Q86XK3 245 aa11.21□□□□□ -0.61
TPM3-209ENST00000368527 SLC9A9Q8IVB4 645 aa11.21□□□□□ -0.61
TPM3-209ENST00000368527 NELFCDQ8IXH7 590 aa11.21□□□□□ -0.61
TPM3-209ENST00000368527 SYCE1Q8N0S2 351 aa11.21□□□□□ -0.61
TPM3-209ENST00000368527 TTLL6Q8N841 843 aa11.21□□□□□ -0.61
TPM3-209ENST00000368527 NOA1Q8NC60 698 aaKnown RBP11.21□□□□□ -0.61
TPM3-209ENST00000368527 LPAR1Q92633 364 aa11.21□□□□□ -0.61
TPM3-209ENST00000368527 PRMT6Q96LA8 375 aaPredicted RBP11.21□□□□□ -0.61
TPM3-209ENST00000368527 SPAG5Q96R06 1193 aa11.21□□□□□ -0.61
TPM3-209ENST00000368527 IWS1Q96ST2 819 aa11.21□□□□□ -0.61
TPM3-209ENST00000368527 OSBPL9Q96SU4 736 aa11.21□□□□□ -0.61
TPM3-209ENST00000368527 MMS19Q96T76 1030 aa11.21□□□□□ -0.61
TPM3-209ENST00000368527 GMLQ99445 158 aa11.21□□□□□ -0.61
TPM3-209ENST00000368527 TEKT3Q9BXF9 490 aa11.21□□□□□ -0.61
TPM3-209ENST00000368527 BHMT2Q9H2M3 363 aa11.21□□□□□ -0.61
TPM3-209ENST00000368527 ZHX3Q9H4I2 956 aa11.21□□□□□ -0.61
TPM3-209ENST00000368527 CWC15Q9P013 229 aaKnown RBP11.21□□□□□ -0.61
TPM3-209ENST00000368527 PCDHGC5Q9Y5F6 944 aa11.21□□□□□ -0.61
TPM3-209ENST00000368527 LOXHD1Q8IVV2 1947 aa11.2□□□□□ -0.62
TPM3-209ENST00000368527 MEIS1O00470 390 aa11.2□□□□□ -0.62
TPM3-209ENST00000368527 ENC1O14682 589 aa11.2□□□□□ -0.62
TPM3-209ENST00000368527 EPHB6O15197 1021 aa11.2□□□□□ -0.62
TPM3-209ENST00000368527 P4HA2O15460 535 aa11.2□□□□□ -0.62
TPM3-209ENST00000368527 N4BP1O75113 896 aaKnown RBP11.2□□□□□ -0.62
TPM3-209ENST00000368527 GCNT3O95395 438 aa11.2□□□□□ -0.62
TPM3-209ENST00000368527 ABL1P00519 1130 aa11.2□□□□□ -0.62
TPM3-209ENST00000368527 ABCD1P33897 745 aa11.2□□□□□ -0.62
TPM3-209ENST00000368527 STAT3P40763 770 aa11.2□□□□□ -0.62
TPM3-209ENST00000368527 NPEPPSP55786 919 aa11.2□□□□□ -0.62
TPM3-209ENST00000368527 APBA1Q02410 837 aa11.2□□□□□ -0.62
TPM3-209ENST00000368527 RAPGEF1Q13905 1077 aa11.2□□□□□ -0.62
TPM3-209ENST00000368527 KLHDC7AQ5VTJ3 777 aa11.2□□□□□ -0.62
TPM3-209ENST00000368527 RINT1Q6NUQ1 792 aa11.2□□□□□ -0.62
TPM3-209ENST00000368527 XRRA1Q6P2D8 792 aa11.2□□□□□ -0.62
TPM3-209ENST00000368527 CCNI2Q6ZMN8 369 aaPredicted RBP11.2□□□□□ -0.62
TPM3-209ENST00000368527 CREG2Q8IUH2 290 aa11.2□□□□□ -0.62
TPM3-209ENST00000368527 SMCR8Q8TEV9 937 aaPredicted RBP11.2□□□□□ -0.62
TPM3-209ENST00000368527 COG1Q8WTW3 980 aa11.2□□□□□ -0.62
TPM3-209ENST00000368527 TAF4BQ92750 862 aa11.2□□□□□ -0.62
TPM3-209ENST00000368527 EEF2KMTQ96G04 330 aa11.2□□□□□ -0.62
TPM3-209ENST00000368527 PBKQ96KB5 322 aa11.2□□□□□ -0.62
TPM3-209ENST00000368527 CRACR2AQ9BSW2 395 aa11.2□□□□□ -0.62
TPM3-209ENST00000368527 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.2□□□□□ -0.62
TPM3-209ENST00000368527 FRMD4BQ9Y2L6 1034 aa11.2□□□□□ -0.62
TPM3-209ENST00000368527 SLX4Q8IY92 1834 aa11.19□□□□□ -0.62
TPM3-209ENST00000368527 FAM196BA6NMK8 535 aa11.19□□□□□ -0.62
TPM3-209ENST00000368527 OPLAHO14841 1288 aa11.19□□□□□ -0.62
TPM3-209ENST00000368527 MAPK13O15264 365 aa11.19□□□□□ -0.62
TPM3-209ENST00000368527 MOCS3O95396 460 aa11.19□□□□□ -0.62
TPM3-209ENST00000368527 CFBP00751 764 aa11.19□□□□□ -0.62
TPM3-209ENST00000368527 ICAM1P05362 532 aa11.19□□□□□ -0.62
TPM3-209ENST00000368527 UCHL3P15374 230 aa11.19□□□□□ -0.62
TPM3-209ENST00000368527 CAP2P40123 477 aa11.19□□□□□ -0.62
TPM3-209ENST00000368527 STAT1P42224 750 aa11.19□□□□□ -0.62
TPM3-209ENST00000368527 HSD17B4P51659 736 aa11.19□□□□□ -0.62
TPM3-209ENST00000368527 NAP1L1P55209 391 aaKnown RBP11.19□□□□□ -0.62
TPM3-209ENST00000368527 TNNC1P63316 161 aa11.19□□□□□ -0.62
TPM3-209ENST00000368527 CETN1Q12798 172 aa11.19□□□□□ -0.62
TPM3-209ENST00000368527 TNFAIP1Q13829 316 aa11.19□□□□□ -0.62
TPM3-209ENST00000368527 PPP2R5EQ16537 467 aa11.19□□□□□ -0.62
TPM3-209ENST00000368527 ALS2CLQ60I27 953 aa11.19□□□□□ -0.62
TPM3-209ENST00000368527 C1orf186Q6ZWK4 172 aa11.19□□□□□ -0.62
TPM3-209ENST00000368527 IFT20Q8IY31 132 aa11.19□□□□□ -0.62
TPM3-209ENST00000368527 SPATA4Q8NEY3 305 aa11.19□□□□□ -0.62
TPM3-209ENST00000368527 SLC16A10Q8TF71 515 aa11.19□□□□□ -0.62
TPM3-209ENST00000368527 HOOK2Q96ED9 719 aa11.19□□□□□ -0.62
TPM3-209ENST00000368527 SELENOOQ9BVL4 669 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms