RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 KIAA1755Q5JYT7 1200 aa19.87■□□□□ 0.77
UBQLN4-201ENST00000368309 TPH2Q8IWU9 490 aa19.87■□□□□ 0.77
UBQLN4-201ENST00000368309 ZC3H3Q8IXZ2 948 aaKnown RBP19.87■□□□□ 0.77
UBQLN4-201ENST00000368309 PCDHB13Q9Y5F0 798 aa19.87■□□□□ 0.77
UBQLN4-201ENST00000368309 TCP10L2B9ZVM9 353 aa19.87■□□□□ 0.77
UBQLN4-201ENST00000368309 AARSP49588 968 aaKnown RBP eCLIP19.87■□□□□ 0.775e-7■■■■■ 34.9
UBQLN4-201ENST00000368309 PTPROQ16827 1216 aa19.87■□□□□ 0.77
UBQLN4-201ENST00000368309 ARHGAP27Q6ZUM4 889 aa19.87■□□□□ 0.77
UBQLN4-201ENST00000368309 ACER1Q8TDN7 264 aa19.87■□□□□ 0.77
UBQLN4-201ENST00000368309 RABGAP1Q9Y3P9 1069 aa19.87■□□□□ 0.77
UBQLN4-201ENST00000368309 XRCC5P13010 732 aaKnown RBP19.87■□□□□ 0.77
UBQLN4-201ENST00000368309 EPM2AIP1Q7L775 607 aaPredicted RBP19.87■□□□□ 0.77
UBQLN4-201ENST00000368309 SMCHD1A6NHR9 2005 aa19.86■□□□□ 0.77
UBQLN4-201ENST00000368309 AGPSO00116 658 aa19.86■□□□□ 0.77
UBQLN4-201ENST00000368309 UCHL3P15374 230 aa19.86■□□□□ 0.77
UBQLN4-201ENST00000368309 EXOC3L4Q17RC7 722 aa19.86■□□□□ 0.77
UBQLN4-201ENST00000368309 CCDC174Q6PII3 467 aa19.86■□□□□ 0.77
UBQLN4-201ENST00000368309 ZNF572Q7Z3I7 529 aaPredicted RBP19.86■□□□□ 0.77
UBQLN4-201ENST00000368309 AENQ8WTP8 325 aaKnown RBP19.86■□□□□ 0.77
UBQLN4-201ENST00000368309 TBCAO75347 108 aaKnown RBP19.86■□□□□ 0.77
UBQLN4-201ENST00000368309 AFPP02771 609 aaKnown RBP19.86■□□□□ 0.77
UBQLN4-201ENST00000368309 ZNF571Q7Z3V5 609 aaPredicted RBP19.86■□□□□ 0.77
UBQLN4-201ENST00000368309 FRMD5Q7Z6J6 570 aa19.86■□□□□ 0.77
UBQLN4-201ENST00000368309 GOLPH3Q9H4A6 298 aa19.86■□□□□ 0.77
UBQLN4-201ENST00000368309 LUC7LQ9NQ29 371 aaKnown RBP19.86■□□□□ 0.77
UBQLN4-201ENST00000368309 CLRN2A0PK11 232 aa19.85■□□□□ 0.77
UBQLN4-201ENST00000368309 NR3C1P04150 777 aa19.85■□□□□ 0.77
UBQLN4-201ENST00000368309 PON1P27169 355 aa19.85■□□□□ 0.77
UBQLN4-201ENST00000368309 CIITAP33076 1130 aa19.85■□□□□ 0.77
UBQLN4-201ENST00000368309 ACTN2P35609 894 aa19.85■□□□□ 0.77
UBQLN4-201ENST00000368309 CFAP221Q4G0U5 840 aa19.85■□□□□ 0.77
UBQLN4-201ENST00000368309 IRF2BP2Q7Z5L9 587 aa19.85■□□□□ 0.77
UBQLN4-201ENST00000368309 KSR1Q8IVT5 923 aa19.85■□□□□ 0.77
UBQLN4-201ENST00000368309 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.85■□□□□ 0.77
UBQLN4-201ENST00000368309 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.85■□□□□ 0.77
UBQLN4-201ENST00000368309 CALUO43852 315 aaPredicted RBP19.85■□□□□ 0.77
UBQLN4-201ENST00000368309 ITIH3Q06033 890 aa19.85■□□□□ 0.77
UBQLN4-201ENST00000368309 SCN9AQ15858 1988 aa19.85■□□□□ 0.77
UBQLN4-201ENST00000368309 SIPA1L1O43166 1804 aa19.85■□□□□ 0.77
UBQLN4-201ENST00000368309 PDXKO00764 312 aa19.85■□□□□ 0.77
UBQLN4-201ENST00000368309 SLC26A4O43511 780 aa19.85■□□□□ 0.77
UBQLN4-201ENST00000368309 MMP14P50281 582 aa19.85■□□□□ 0.77
UBQLN4-201ENST00000368309 ZYXQ15942 572 aaKnown RBP19.85■□□□□ 0.77
UBQLN4-201ENST00000368309 DPY19L2P1Q6NXN4 242 aa19.85■□□□□ 0.77
UBQLN4-201ENST00000368309 C8orf74Q6P047 294 aa19.85■□□□□ 0.77
UBQLN4-201ENST00000368309 GJB7Q6PEY0 223 aa19.85■□□□□ 0.77
UBQLN4-201ENST00000368309 WDR18Q9BV38 432 aa19.85■□□□□ 0.77
UBQLN4-201ENST00000368309 STIM2Q9P246 746 aa19.85■□□□□ 0.77
UBQLN4-201ENST00000368309 NMT1P30419 496 aaKnown RBP19.84■□□□□ 0.77
UBQLN4-201ENST00000368309 ZC2HC1CQ53FD0 456 aaPredicted RBP19.84■□□□□ 0.77
UBQLN4-201ENST00000368309 RINT1Q6NUQ1 792 aa19.84■□□□□ 0.77
UBQLN4-201ENST00000368309 FAM170AA1A519 330 aa19.84■□□□□ 0.77
UBQLN4-201ENST00000368309 RBM46Q8TBY0 533 aaKnown RBP19.84■□□□□ 0.77
UBQLN4-201ENST00000368309 ASTN1O14525 1302 aa19.84■□□□□ 0.77
UBQLN4-201ENST00000368309 GOLGA6BA6NDN3 693 aa19.84■□□□□ 0.77
UBQLN4-201ENST00000368309 STAT2P52630 851 aa19.84■□□□□ 0.77
UBQLN4-201ENST00000368309 MCTP2Q6DN12 878 aa19.84■□□□□ 0.77
UBQLN4-201ENST00000368309 LEKR1Q6ZMV7 388 aa19.84■□□□□ 0.77
UBQLN4-201ENST00000368309 MYCT1Q8N699 235 aa19.84■□□□□ 0.77
UBQLN4-201ENST00000368309 DYDC2Q96IM9 177 aa19.84■□□□□ 0.77
UBQLN4-201ENST00000368309 AJAP1Q9UKB5 411 aaPredicted RBP19.84■□□□□ 0.77
UBQLN4-201ENST00000368309 IGLV3-22A0A075B6J6 115 aa19.83■□□□□ 0.77
UBQLN4-201ENST00000368309 ESYT3A0FGR9 886 aa19.83■□□□□ 0.77
UBQLN4-201ENST00000368309 ZSCAN5CA6NGD5 496 aaPredicted RBP19.83■□□□□ 0.77
UBQLN4-201ENST00000368309 EYA4O95677 639 aa19.83■□□□□ 0.77
UBQLN4-201ENST00000368309 GOLGA6L1Q8N7Z2 621 aa19.83■□□□□ 0.77
UBQLN4-201ENST00000368309 GOLGA5Q8TBA6 731 aa19.83■□□□□ 0.77
UBQLN4-201ENST00000368309 TYW1Q9NV66 732 aaKnown RBP19.83■□□□□ 0.77
UBQLN4-201ENST00000368309 SLITRK3O94933 977 aa19.83■□□□□ 0.76
UBQLN4-201ENST00000368309 FKBP1AP62942 108 aaKnown RBP19.83■□□□□ 0.76
UBQLN4-201ENST00000368309 CC2D2BQ6DHV5 1058 aa19.83■□□□□ 0.76
UBQLN4-201ENST00000368309 BTNL9Q6UXG8 535 aa19.83■□□□□ 0.76
UBQLN4-201ENST00000368309 GRID2IPA4D2P6 1211 aa19.83■□□□□ 0.76
UBQLN4-201ENST00000368309 GLI1P08151 1106 aa19.83■□□□□ 0.76
UBQLN4-201ENST00000368309 NOP2P46087 812 aaKnown RBP19.83■□□□□ 0.76
UBQLN4-201ENST00000368309 OTOP1Q7RTM1 612 aa19.83■□□□□ 0.76
UBQLN4-201ENST00000368309 AFAP1L1Q8TED9 768 aa19.83■□□□□ 0.76
UBQLN4-201ENST00000368309 HSD17B14Q9BPX1 270 aa19.83■□□□□ 0.76
UBQLN4-201ENST00000368309 POLR3CQ9BUI4 534 aaPredicted RBP19.83■□□□□ 0.76
UBQLN4-201ENST00000368309 NRXN2Q9P2S2 1712 aa19.83■□□□□ 0.76
UBQLN4-201ENST00000368309 YDJCA8MPS7 323 aa19.82■□□□□ 0.76
UBQLN4-201ENST00000368309 NPM3O75607 178 aaKnown RBP19.82■□□□□ 0.76
UBQLN4-201ENST00000368309 LRCH2Q5VUJ6 765 aa19.82■□□□□ 0.76
UBQLN4-201ENST00000368309 FOXR1Q6PIV2 292 aa19.82■□□□□ 0.76
UBQLN4-201ENST00000368309 SLC35C1Q96A29 364 aa19.82■□□□□ 0.76
UBQLN4-201ENST00000368309 ENTPD3O75355 529 aa19.82■□□□□ 0.76
UBQLN4-201ENST00000368309 FAM13AO94988 1023 aa19.82■□□□□ 0.76
UBQLN4-201ENST00000368309 EPB41P11171 864 aaKnown RBP19.82■□□□□ 0.76
UBQLN4-201ENST00000368309 MEI1Q5TIA1 1274 aa19.82■□□□□ 0.76
UBQLN4-201ENST00000368309 TSKSQ9UJT2 592 aa19.82■□□□□ 0.76
UBQLN4-201ENST00000368309 TGFB1I1O43294 461 aa19.82■□□□□ 0.76
UBQLN4-201ENST00000368309 RPL13P26373 211 aaKnown RBP19.82■□□□□ 0.76
UBQLN4-201ENST00000368309 COG2Q14746 738 aa19.82■□□□□ 0.76
UBQLN4-201ENST00000368309 EPHA7Q15375 998 aa19.82■□□□□ 0.76
UBQLN4-201ENST00000368309 IFT81Q8WYA0 676 aa19.82■□□□□ 0.76
UBQLN4-201ENST00000368309 PLCB1Q9NQ66 1216 aa19.82■□□□□ 0.76
UBQLN4-201ENST00000368309 PCDHGC5Q9Y5F6 944 aa19.82■□□□□ 0.76
UBQLN4-201ENST00000368309 CYP3A4P08684 503 aa19.81■□□□□ 0.76
UBQLN4-201ENST00000368309 SKIDA1Q1XH10 827 aa19.81■□□□□ 0.76
UBQLN4-201ENST00000368309 GCNT4Q9P109 453 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms