RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 PCDHA2Q9Y5H9 948 aa13.49□□□□□ -0.25
PTPN7-202ENST00000367279 BTAF1O14981 1849 aa13.49□□□□□ -0.25
PTPN7-202ENST00000367279 EIF3HO15372 352 aaKnown RBP eCLIP13.49□□□□□ -0.25
PTPN7-202ENST00000367279 AKAP3O75969 853 aa13.49□□□□□ -0.25
PTPN7-202ENST00000367279 SLC12A3P55017 1021 aa13.49□□□□□ -0.25
PTPN7-202ENST00000367279 CORO7P57737 925 aa13.49□□□□□ -0.25
PTPN7-202ENST00000367279 ICA1Q05084 483 aa13.49□□□□□ -0.25
PTPN7-202ENST00000367279 CRY2Q49AN0 593 aa13.49□□□□□ -0.25
PTPN7-202ENST00000367279 ODF2Q5BJF6 829 aa13.49□□□□□ -0.25
PTPN7-202ENST00000367279 ZNF572Q7Z3I7 529 aaPredicted RBP13.49□□□□□ -0.25
PTPN7-202ENST00000367279 VPS36Q86VN1 386 aa13.49□□□□□ -0.25
PTPN7-202ENST00000367279 RDH13Q8NBN7 331 aa13.49□□□□□ -0.25
PTPN7-202ENST00000367279 SYN2Q92777 582 aaPredicted RBP13.49□□□□□ -0.25
PTPN7-202ENST00000367279 NAP1L4Q99733 375 aaKnown RBP13.49□□□□□ -0.25
PTPN7-202ENST00000367279 FAM169AQ9Y6X4 670 aa13.49□□□□□ -0.25
PTPN7-202ENST00000367279 RBAK-RBAKDNI3L0D1 243 aa13.49□□□□□ -0.25
PTPN7-202ENST00000367279 NR3C1P04150 777 aa13.49□□□□□ -0.25
PTPN7-202ENST00000367279 DDR1Q08345 913 aa13.49□□□□□ -0.25
PTPN7-202ENST00000367279 FBXO11Q86XK2 927 aa13.49□□□□□ -0.25
PTPN7-202ENST00000367279 MYCT1Q8N699 235 aa13.49□□□□□ -0.25
PTPN7-202ENST00000367279 USP38Q8NB14 1042 aa13.49□□□□□ -0.25
PTPN7-202ENST00000367279 UBLCP1Q8WVY7 318 aaPredicted RBP13.49□□□□□ -0.25
PTPN7-202ENST00000367279 RNF14Q9UBS8 474 aa13.49□□□□□ -0.25
PTPN7-202ENST00000367279 PLAAQ9Y263 795 aa13.49□□□□□ -0.25
PTPN7-202ENST00000367279 KRIT1O00522 736 aa13.48□□□□□ -0.25
PTPN7-202ENST00000367279 FAM13AO94988 1023 aa13.48□□□□□ -0.25
PTPN7-202ENST00000367279 KIF4AO95239 1232 aa13.48□□□□□ -0.25
PTPN7-202ENST00000367279 PON1P27169 355 aa13.48□□□□□ -0.25
PTPN7-202ENST00000367279 NOVP48745 357 aa13.48□□□□□ -0.25
PTPN7-202ENST00000367279 GBP6Q6ZN66 633 aa13.48□□□□□ -0.25
PTPN7-202ENST00000367279 PPM1EQ8WY54 764 aa13.48□□□□□ -0.25
PTPN7-202ENST00000367279 CAVIN3Q969G5 261 aa13.48□□□□□ -0.25
PTPN7-202ENST00000367279 AMNQ9BXJ7 453 aa13.48□□□□□ -0.25
PTPN7-202ENST00000367279 DPH5Q9H2P9 285 aa13.48□□□□□ -0.25
PTPN7-202ENST00000367279 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.48□□□□□ -0.253e-11■■■■■ 99.4
PTPN7-202ENST00000367279 ATF5Q9Y2D1 282 aaPredicted RBP13.48□□□□□ -0.25
PTPN7-202ENST00000367279 DDTLA6NHG4 134 aaPredicted RBP13.48□□□□□ -0.25
PTPN7-202ENST00000367279 ZNF233A6NK53 670 aa13.48□□□□□ -0.25
PTPN7-202ENST00000367279 FAM86B1E9PN63 330 aa13.48□□□□□ -0.25
PTPN7-202ENST00000367279 FLOT1O75955 427 aa13.48□□□□□ -0.25
PTPN7-202ENST00000367279 FAM86B2P0C5J1 330 aa13.48□□□□□ -0.25
PTPN7-202ENST00000367279 CRKP46108 304 aa13.48□□□□□ -0.25
PTPN7-202ENST00000367279 USP11P51784 963 aa13.48□□□□□ -0.25
PTPN7-202ENST00000367279 MAEAQ7L5Y9 396 aa13.48□□□□□ -0.25
PTPN7-202ENST00000367279 ZNF622Q969S3 477 aaKnown RBP eCLIP13.48□□□□□ -0.251e-6■■□□□ 13.3
PTPN7-202ENST00000367279 RNPC3Q96LT9 517 aaKnown RBP13.48□□□□□ -0.25
PTPN7-202ENST00000367279 RUSC1Q9BVN2 902 aa13.48□□□□□ -0.25
PTPN7-202ENST00000367279 KCNMB3Q9NPA1 279 aa13.48□□□□□ -0.25
PTPN7-202ENST00000367279 GDF3Q9NR23 364 aa13.48□□□□□ -0.25
PTPN7-202ENST00000367279 AIPL1Q9NZN9 384 aa13.48□□□□□ -0.25
PTPN7-202ENST00000367279 NAGPAQ9UK23 515 aa13.48□□□□□ -0.25
PTPN7-202ENST00000367279 COL24A1Q17RW2 1714 aa13.48□□□□□ -0.25
PTPN7-202ENST00000367279 CFBP00751 764 aa13.47□□□□□ -0.25
PTPN7-202ENST00000367279 NMT1P30419 496 aaKnown RBP13.47□□□□□ -0.25
PTPN7-202ENST00000367279 CYP2J2P51589 502 aa13.47□□□□□ -0.25
PTPN7-202ENST00000367279 ZC2HC1CQ53FD0 456 aaPredicted RBP13.47□□□□□ -0.25
PTPN7-202ENST00000367279 PACS2Q86VP3 889 aa13.47□□□□□ -0.25
PTPN7-202ENST00000367279 INPP4AQ96PE3 977 aaPredicted RBP13.47□□□□□ -0.25
PTPN7-202ENST00000367279 P2RX7Q99572 595 aaKnown RBP13.47□□□□□ -0.25
PTPN7-202ENST00000367279 AJAP1Q9UKB5 411 aaPredicted RBP13.47□□□□□ -0.25
PTPN7-202ENST00000367279 RABGAP1Q9Y3P9 1069 aa13.47□□□□□ -0.25
PTPN7-202ENST00000367279 PCDHGC5Q9Y5F6 944 aa13.47□□□□□ -0.25
PTPN7-202ENST00000367279 F5H6K3 240 aa13.47□□□□□ -0.25
PTPN7-202ENST00000367279 MEIS2O14770 477 aa13.47□□□□□ -0.25
PTPN7-202ENST00000367279 TOM1O60784 492 aa13.47□□□□□ -0.25
PTPN7-202ENST00000367279 H2AFZP0C0S5 128 aa13.47□□□□□ -0.25
PTPN7-202ENST00000367279 RPL13P26373 211 aaKnown RBP13.47□□□□□ -0.25
PTPN7-202ENST00000367279 KLRC3Q07444 240 aa13.47□□□□□ -0.25
PTPN7-202ENST00000367279 IFI16Q16666 785 aaKnown RBP13.47□□□□□ -0.25
PTPN7-202ENST00000367279 ARHGAP44Q17R89 818 aa13.47□□□□□ -0.25
PTPN7-202ENST00000367279 EDRF1Q3B7T1 1238 aa13.47□□□□□ -0.25
PTPN7-202ENST00000367279 H2AFVQ71UI9 128 aa13.47□□□□□ -0.25
PTPN7-202ENST00000367279 RBM46Q8TBY0 533 aaKnown RBP13.47□□□□□ -0.25
PTPN7-202ENST00000367279 CERKQ8TCT0 537 aa13.47□□□□□ -0.25
PTPN7-202ENST00000367279 SH3GL2Q99962 352 aa13.47□□□□□ -0.25
PTPN7-202ENST00000367279 PKD2L1Q9P0L9 805 aa13.47□□□□□ -0.25
PTPN7-202ENST00000367279 ZBTB39O15060 712 aa13.47□□□□□ -0.25
PTPN7-202ENST00000367279 NR1D1P20393 614 aa13.47□□□□□ -0.25
PTPN7-202ENST00000367279 RNF187Q5TA31 235 aaPredicted RBP13.47□□□□□ -0.25
PTPN7-202ENST00000367279 PPP4R3CPQ6ZMV5 832 aa13.47□□□□□ -0.25
PTPN7-202ENST00000367279 IRF2BP2Q7Z5L9 587 aa13.47□□□□□ -0.25
PTPN7-202ENST00000367279 PPANQ9NQ55 473 aaKnown RBP13.47□□□□□ -0.25
PTPN7-202ENST00000367279 AMACRQ9UHK6 382 aa13.47□□□□□ -0.25
PTPN7-202ENST00000367279 PLIN4Q96Q06 1357 aa13.47□□□□□ -0.25
PTPN7-202ENST00000367279 MYH4Q9Y623 1939 aa13.47□□□□□ -0.25
PTPN7-202ENST00000367279 H0YHG0 523 aa13.46□□□□□ -0.25
PTPN7-202ENST00000367279 SHOX2O60902 331 aaPredicted RBP13.46□□□□□ -0.25
PTPN7-202ENST00000367279 KIAA0754O94854 1291 aa13.46□□□□□ -0.25
PTPN7-202ENST00000367279 HYIQ5T013 277 aa13.46□□□□□ -0.25
PTPN7-202ENST00000367279 APOBEC3HQ6NTF7 200 aaKnown RBP13.46□□□□□ -0.25
PTPN7-202ENST00000367279 RUBCNQ92622 972 aa13.46□□□□□ -0.25
PTPN7-202ENST00000367279 DNAJC18Q9H819 358 aa13.46□□□□□ -0.25
PTPN7-202ENST00000367279 NOC2LQ9Y3T9 749 aaKnown RBP13.46□□□□□ -0.25
PTPN7-202ENST00000367279 SPATA31C1P0DKV0 1188 aa13.46□□□□□ -0.25
PTPN7-202ENST00000367279 ITGA4P13612 1032 aa13.46□□□□□ -0.25
PTPN7-202ENST00000367279 SEC24CP53992 1094 aa13.46□□□□□ -0.25
PTPN7-202ENST00000367279 ERVK-9P63128 1117 aa13.46□□□□□ -0.25
PTPN7-202ENST00000367279 CCDC174Q6PII3 467 aa13.46□□□□□ -0.25
PTPN7-202ENST00000367279 FRMD5Q7Z6J6 570 aa13.46□□□□□ -0.25
PTPN7-202ENST00000367279 SP8Q8IXZ3 490 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms