RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 FTCDO95954 541 aa9.72□□□□□ -0.85
SYNE1-205ENST00000367251 PRCPP42785 496 aa9.72□□□□□ -0.85
SYNE1-205ENST00000367251 MKRN3Q13064 507 aaKnown RBP9.72□□□□□ -0.85
SYNE1-205ENST00000367251 NR1H3Q13133 447 aa9.72□□□□□ -0.85
SYNE1-205ENST00000367251 IQCB1Q15051 598 aa9.72□□□□□ -0.85
SYNE1-205ENST00000367251 SLC7A3Q8WY07 619 aa9.72□□□□□ -0.85
SYNE1-205ENST00000367251 TMEM47Q9BQJ4 181 aa9.72□□□□□ -0.85
SYNE1-205ENST00000367251 APOL6Q9BWW8 343 aa9.72□□□□□ -0.85
SYNE1-205ENST00000367251 ZMYND12Q9H0C1 365 aa9.72□□□□□ -0.85
SYNE1-205ENST00000367251 DCP1AQ9NPI6 582 aaPredicted RBP9.72□□□□□ -0.85
SYNE1-205ENST00000367251 ADD3Q9UEY8 706 aaKnown RBP9.72□□□□□ -0.85
SYNE1-205ENST00000367251 SFMBT1Q9UHJ3 866 aa9.72□□□□□ -0.85
SYNE1-205ENST00000367251 FBXO2Q9UK22 296 aaPredicted RBP9.72□□□□□ -0.85
SYNE1-205ENST00000367251 CAPN11Q9UMQ6 739 aa9.72□□□□□ -0.85
SYNE1-205ENST00000367251 SUGT1Q9Y2Z0 365 aa9.72□□□□□ -0.85
SYNE1-205ENST00000367251 COL15A1P39059 1388 aa9.72□□□□□ -0.85
SYNE1-205ENST00000367251 ITSN1Q15811 1721 aa9.72□□□□□ -0.85
SYNE1-205ENST00000367251 USP17L3A6NCW0 530 aa9.72□□□□□ -0.85
SYNE1-205ENST00000367251 USP17L4A6NCW7 530 aa9.72□□□□□ -0.85
SYNE1-205ENST00000367251 COBLO75128 1261 aa9.72□□□□□ -0.85
SYNE1-205ENST00000367251 LDHAP00338 332 aaKnown RBP9.72□□□□□ -0.85
SYNE1-205ENST00000367251 PSAPP07602 524 aa9.72□□□□□ -0.85
SYNE1-205ENST00000367251 RWDD2BP57060 319 aa9.72□□□□□ -0.85
SYNE1-205ENST00000367251 USP17L1Q7RTZ2 530 aa9.72□□□□□ -0.85
SYNE1-205ENST00000367251 CNPY4Q8N129 248 aa9.72□□□□□ -0.85
SYNE1-205ENST00000367251 MMS19Q96T76 1030 aa9.72□□□□□ -0.85
SYNE1-205ENST00000367251 UBE2TQ9NPD8 197 aaPredicted RBP9.72□□□□□ -0.85
SYNE1-205ENST00000367251 MINPP1Q9UNW1 487 aa9.72□□□□□ -0.85
SYNE1-205ENST00000367251 GDAQ9Y2T3 454 aa9.72□□□□□ -0.85
SYNE1-205ENST00000367251 IPO5O00410 1097 aaKnown RBP9.71□□□□□ -0.85
SYNE1-205ENST00000367251 SORBS3O60504 671 aa9.71□□□□□ -0.85
SYNE1-205ENST00000367251 KRT10P13645 584 aa9.71□□□□□ -0.85
SYNE1-205ENST00000367251 EFCC1Q9HA90 598 aa9.71□□□□□ -0.85
SYNE1-205ENST00000367251 MROH7-TTC4A0A0A0MT08 1334 aa9.71□□□□□ -0.85
SYNE1-205ENST00000367251 DPYSL4O14531 572 aa9.71□□□□□ -0.85
SYNE1-205ENST00000367251 INHBAP08476 426 aa9.71□□□□□ -0.85
SYNE1-205ENST00000367251 ASPHQ12797 758 aa9.71□□□□□ -0.85
SYNE1-205ENST00000367251 NAALADL2Q58DX5 795 aa9.71□□□□□ -0.85
SYNE1-205ENST00000367251 TMCO4Q5TGY1 634 aa9.71□□□□□ -0.85
SYNE1-205ENST00000367251 KCTD16Q68DU8 428 aa9.71□□□□□ -0.85
SYNE1-205ENST00000367251 PLEKHA4Q9H4M7 779 aa9.71□□□□□ -0.85
SYNE1-205ENST00000367251 VIPAS39Q9H9C1 493 aa9.71□□□□□ -0.85
SYNE1-205ENST00000367251 SUGCTQ9HAC7 445 aa9.71□□□□□ -0.85
SYNE1-205ENST00000367251 CEMIPQ8WUJ3 1361 aa9.71□□□□□ -0.86
SYNE1-205ENST00000367251 A0A1B0GTH6 734 aa9.71□□□□□ -0.86
SYNE1-205ENST00000367251 LRRIQ4A6NIV6 560 aa9.71□□□□□ -0.86
SYNE1-205ENST00000367251 RASGRF2O14827 1237 aa9.71□□□□□ -0.86
SYNE1-205ENST00000367251 BNIP3LO60238 219 aa9.71□□□□□ -0.86
SYNE1-205ENST00000367251 GGPS1O95749 300 aa9.71□□□□□ -0.86
SYNE1-205ENST00000367251 GNL1P36915 607 aaPredicted RBP9.71□□□□□ -0.86
SYNE1-205ENST00000367251 PLTPP55058 493 aa9.71□□□□□ -0.86
SYNE1-205ENST00000367251 PDIA5Q14554 519 aa9.71□□□□□ -0.86
SYNE1-205ENST00000367251 ARID5BQ14865 1188 aa9.71□□□□□ -0.86
SYNE1-205ENST00000367251 KRT39Q6A163 491 aa9.71□□□□□ -0.86
SYNE1-205ENST00000367251 BRINP3Q76B58 766 aa9.71□□□□□ -0.86
SYNE1-205ENST00000367251 STK38LQ9Y2H1 464 aa9.71□□□□□ -0.86
SYNE1-205ENST00000367251 ATP8A1Q9Y2Q0 1164 aa9.71□□□□□ -0.86
SYNE1-205ENST00000367251 TECPR2O15040 1411 aa9.71□□□□□ -0.86
SYNE1-205ENST00000367251 MYO3BQ8WXR4 1341 aa9.71□□□□□ -0.86
SYNE1-205ENST00000367251 A6NJR5 290 aa9.71□□□□□ -0.86
SYNE1-205ENST00000367251 GOLGA8CPA6NN73 597 aa9.71□□□□□ -0.86
SYNE1-205ENST00000367251 KCTD17Q8N5Z5 321 aa9.71□□□□□ -0.86
SYNE1-205ENST00000367251 MAP3K14Q99558 947 aa9.71□□□□□ -0.86
SYNE1-205ENST00000367251 HINFPQ9BQA5 517 aa9.71□□□□□ -0.86
SYNE1-205ENST00000367251 CCSER1Q9C0I3 900 aa9.71□□□□□ -0.86
SYNE1-205ENST00000367251 ADGRB1O14514 1584 aa9.71□□□□□ -0.86
SYNE1-205ENST00000367251 CYP2D7A0A087X1C5 515 aa9.71□□□□□ -0.86
SYNE1-205ENST00000367251 FOXP2O15409 715 aa9.71□□□□□ -0.86
SYNE1-205ENST00000367251 RXRBP28702 533 aa9.71□□□□□ -0.86
SYNE1-205ENST00000367251 USP11P51784 963 aa9.71□□□□□ -0.86
SYNE1-205ENST00000367251 IFT88Q13099 833 aa9.71□□□□□ -0.86
SYNE1-205ENST00000367251 SBK1Q52WX2 424 aa9.71□□□□□ -0.86
SYNE1-205ENST00000367251 TBC1D9BQ66K14 1250 aa9.71□□□□□ -0.86
SYNE1-205ENST00000367251 SEPT14Q6ZU15 432 aa9.71□□□□□ -0.86
SYNE1-205ENST00000367251 FBXO41Q8TF61 875 aa9.71□□□□□ -0.86
SYNE1-205ENST00000367251 MYCBPQ99417 103 aaPredicted RBP9.71□□□□□ -0.86
SYNE1-205ENST00000367251 SEPT9Q9UHD8 586 aaPredicted RBP9.71□□□□□ -0.86
SYNE1-205ENST00000367251 KIF28PB7ZC32 967 aa9.7□□□□□ -0.86
SYNE1-205ENST00000367251 PRPSAP1Q14558 356 aa9.7□□□□□ -0.86
SYNE1-205ENST00000367251 STOX1Q6ZVD7 989 aa9.7□□□□□ -0.86
SYNE1-205ENST00000367251 SH3RF3Q8TEJ3 882 aaPredicted RBP9.7□□□□□ -0.86
SYNE1-205ENST00000367251 SPATA17Q96L03 361 aa9.7□□□□□ -0.86
SYNE1-205ENST00000367251 RCSD1Q6JBY9 416 aa9.7□□□□□ -0.86
SYNE1-205ENST00000367251 RFX6Q8HWS3 928 aa9.7□□□□□ -0.86
SYNE1-205ENST00000367251 BBS5Q8N3I7 341 aa9.7□□□□□ -0.86
SYNE1-205ENST00000367251 PHF20Q9BVI0 1012 aa9.7□□□□□ -0.86
SYNE1-205ENST00000367251 FAM8A1Q9UBU6 413 aa9.7□□□□□ -0.86
SYNE1-205ENST00000367251 AXIN2Q9Y2T1 843 aa9.7□□□□□ -0.86
SYNE1-205ENST00000367251 FAM187AA6NFU0 413 aa9.7□□□□□ -0.86
SYNE1-205ENST00000367251 MCF2LO15068 1137 aa9.7□□□□□ -0.86
SYNE1-205ENST00000367251 CSF1RP07333 972 aa9.7□□□□□ -0.86
SYNE1-205ENST00000367251 PRR29P0C7W0 189 aa9.7□□□□□ -0.86
SYNE1-205ENST00000367251 RFC1P35251 1148 aaPredicted RBP9.7□□□□□ -0.86
SYNE1-205ENST00000367251 PRELPP51888 382 aa9.7□□□□□ -0.86
SYNE1-205ENST00000367251 COASYQ13057 564 aa9.7□□□□□ -0.86
SYNE1-205ENST00000367251 OXER1Q8TDS5 423 aa9.7□□□□□ -0.86
SYNE1-205ENST00000367251 GBP5Q96PP8 586 aa9.7□□□□□ -0.86
SYNE1-205ENST00000367251 PFASO15067 1338 aa9.7□□□□□ -0.86
SYNE1-205ENST00000367251 SGK1O00141 431 aa9.7□□□□□ -0.86
SYNE1-205ENST00000367251 CLIC2O15247 247 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms