RNA–Protein interactions for RNA: ENST00000361528.8

CNOT4-203, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT4, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-203ENST00000361528 PDCD7Q8N8D1 485 aaKnown RBP12.55□□□□□ -0.4
CNOT4-203ENST00000361528 SLC17A8Q8NDX2 589 aa12.55□□□□□ -0.4
CNOT4-203ENST00000361528 HELBQ8NG08 1087 aaPredicted RBP12.55□□□□□ -0.4
CNOT4-203ENST00000361528 SEC14L1Q92503 715 aa12.55□□□□□ -0.4
CNOT4-203ENST00000361528 PSMB7Q99436 277 aa12.55□□□□□ -0.4
CNOT4-203ENST00000361528 SIKE1Q9BRV8 207 aa12.55□□□□□ -0.4
CNOT4-203ENST00000361528 GJB4Q9NTQ9 266 aa12.55□□□□□ -0.4
CNOT4-203ENST00000361528 BTBD7Q9P203 1132 aa12.55□□□□□ -0.4
CNOT4-203ENST00000361528 SPATA31D1Q6ZQQ2 1576 aa12.55□□□□□ -0.4
CNOT4-203ENST00000361528 MYH7BA7E2Y1 1941 aa12.55□□□□□ -0.4
CNOT4-203ENST00000361528 RGPD1P0DJD0 1748 aa12.55□□□□□ -0.4
CNOT4-203ENST00000361528 PNPLA7Q6ZV29 1317 aa12.54□□□□□ -0.4
CNOT4-203ENST00000361528 PIK3C2BO00750 1634 aa12.54□□□□□ -0.4
CNOT4-203ENST00000361528 TBC1D12O60347 775 aa12.54□□□□□ -0.4
CNOT4-203ENST00000361528 FUT4P22083 530 aa12.54□□□□□ -0.4
CNOT4-203ENST00000361528 CCNFP41002 786 aa12.54□□□□□ -0.4
CNOT4-203ENST00000361528 RAB15P59190 212 aa12.54□□□□□ -0.4
CNOT4-203ENST00000361528 RASSF7Q02833 373 aa12.54□□□□□ -0.4
CNOT4-203ENST00000361528 KRT72Q14CN4 511 aa12.54□□□□□ -0.4
CNOT4-203ENST00000361528 TCERG1LQ5VWI1 586 aa12.54□□□□□ -0.4
CNOT4-203ENST00000361528 RSPH3Q86UC2 560 aa12.54□□□□□ -0.4
CNOT4-203ENST00000361528 CGREF1Q99674 301 aa12.54□□□□□ -0.4
CNOT4-203ENST00000361528 HNRNPABQ99729 332 aaKnown RBP12.54□□□□□ -0.4
CNOT4-203ENST00000361528 TMEM109Q9BVC6 243 aa12.54□□□□□ -0.4
CNOT4-203ENST00000361528 ASCC2Q9H1I8 757 aaPredicted RBP12.54□□□□□ -0.4
CNOT4-203ENST00000361528 METTL14Q9HCE5 456 aaKnown RBP12.54□□□□□ -0.4
CNOT4-203ENST00000361528 TLR7Q9NYK1 1049 aaKnown RBP12.54□□□□□ -0.4
CNOT4-203ENST00000361528 SEC63Q9UGP8 760 aaKnown RBP12.54□□□□□ -0.4
CNOT4-203ENST00000361528 TRIM33Q9UPN9 1127 aa12.54□□□□□ -0.4
CNOT4-203ENST00000361528 CD2APQ9Y5K6 639 aa12.54□□□□□ -0.4
CNOT4-203ENST00000361528 MAP3K7O43318 606 aa12.54□□□□□ -0.4
CNOT4-203ENST00000361528 NCK2O43639 380 aa12.54□□□□□ -0.4
CNOT4-203ENST00000361528 VDRP11473 427 aa12.54□□□□□ -0.4
CNOT4-203ENST00000361528 HOXA10P31260 410 aaPredicted RBP12.54□□□□□ -0.4
CNOT4-203ENST00000361528 STIP1P31948 543 aaKnown RBP12.54□□□□□ -0.4
CNOT4-203ENST00000361528 RTP1P59025 263 aa12.54□□□□□ -0.4
CNOT4-203ENST00000361528 CTDSPL2Q05D32 466 aa12.54□□□□□ -0.4
CNOT4-203ENST00000361528 EIF4A2Q14240 407 aaKnown RBP12.54□□□□□ -0.4
CNOT4-203ENST00000361528 TRADDQ15628 312 aa12.54□□□□□ -0.4
CNOT4-203ENST00000361528 CNGA2Q16280 664 aa12.54□□□□□ -0.4
CNOT4-203ENST00000361528 SPTY2D1Q68D10 685 aaPredicted RBP12.54□□□□□ -0.4
CNOT4-203ENST00000361528 ZNF280DQ6N043 979 aa12.54□□□□□ -0.4
CNOT4-203ENST00000361528 BTNL9Q6UXG8 535 aa12.54□□□□□ -0.4
CNOT4-203ENST00000361528 NOSTRINQ8IVI9 506 aa12.54□□□□□ -0.4
CNOT4-203ENST00000361528 NELFCDQ8IXH7 590 aa12.54□□□□□ -0.4
CNOT4-203ENST00000361528 USHBP1Q8N6Y0 703 aa12.54□□□□□ -0.4
CNOT4-203ENST00000361528 SUPT20HQ8NEM7 779 aa12.54□□□□□ -0.4
CNOT4-203ENST00000361528 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.54□□□□□ -0.4
CNOT4-203ENST00000361528 NELFBQ8WX92 580 aa12.54□□□□□ -0.4
CNOT4-203ENST00000361528 ABTB1Q969K4 478 aaPredicted RBP12.54□□□□□ -0.4
CNOT4-203ENST00000361528 COG3Q96JB2 828 aa12.54□□□□□ -0.4
CNOT4-203ENST00000361528 ZNF184Q99676 751 aaPredicted RBP12.54□□□□□ -0.4
CNOT4-203ENST00000361528 PYM1Q9BRP8 204 aaKnown RBP12.54□□□□□ -0.4
CNOT4-203ENST00000361528 UBAC1Q9BSL1 405 aa12.54□□□□□ -0.4
CNOT4-203ENST00000361528 DHX36Q9H2U1 1008 aaKnown RBP12.54□□□□□ -0.4
CNOT4-203ENST00000361528 TLE6Q9H808 572 aa12.54□□□□□ -0.4
CNOT4-203ENST00000361528 FAIMQ9NVQ4 179 aa12.54□□□□□ -0.4
CNOT4-203ENST00000361528 HESX1Q9UBX0 185 aa12.54□□□□□ -0.4
CNOT4-203ENST00000361528 DDX60Q8IY21 1712 aaKnown RBP12.53□□□□□ -0.4
CNOT4-203ENST00000361528 CCDC188H7C350 402 aa12.53□□□□□ -0.4
CNOT4-203ENST00000361528 RGS16O15492 202 aaPredicted RBP12.53□□□□□ -0.4
CNOT4-203ENST00000361528 KIF11P52732 1056 aa12.53□□□□□ -0.4
CNOT4-203ENST00000361528 SLC34A1Q06495 639 aa12.53□□□□□ -0.4
CNOT4-203ENST00000361528 CCDC153Q494R4 210 aa12.53□□□□□ -0.4
CNOT4-203ENST00000361528 RRAGBQ5VZM2 374 aa12.53□□□□□ -0.4
CNOT4-203ENST00000361528 OLFML2BQ68BL8 750 aa12.53□□□□□ -0.4
CNOT4-203ENST00000361528 RNF25Q96BH1 459 aaPredicted RBP12.53□□□□□ -0.4
CNOT4-203ENST00000361528 ZMAT2Q96NC0 199 aaKnown RBP12.53□□□□□ -0.4
CNOT4-203ENST00000361528 CDK19Q9BWU1 502 aa12.53□□□□□ -0.4
CNOT4-203ENST00000361528 TXLNGYQ9BZA5 131 aa12.53□□□□□ -0.4
CNOT4-203ENST00000361528 STRN4Q9NRL3 753 aa12.53□□□□□ -0.4
CNOT4-203ENST00000361528 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.53□□□□□ -0.4
CNOT4-203ENST00000361528 STK32BQ9NY57 414 aa12.53□□□□□ -0.4
CNOT4-203ENST00000361528 ZNF212Q9UDV6 495 aa12.53□□□□□ -0.4
CNOT4-203ENST00000361528 PLAGL2Q9UPG8 496 aa12.53□□□□□ -0.4
CNOT4-203ENST00000361528 FADS3Q9Y5Q0 445 aa12.53□□□□□ -0.4
CNOT4-203ENST00000361528 PALLDQ8WX93 1383 aa12.53□□□□□ -0.4
CNOT4-203ENST00000361528 SOS2Q07890 1332 aaPredicted RBP12.53□□□□□ -0.4
CNOT4-203ENST00000361528 hCG_2014768A0A024R1R8 64 aa12.53□□□□□ -0.4
CNOT4-203ENST00000361528 ZFYP08048 801 aaPredicted RBP12.53□□□□□ -0.4
CNOT4-203ENST00000361528 SPATA31D3P0C874 917 aa12.53□□□□□ -0.4
CNOT4-203ENST00000361528 SERPINB3P29508 390 aa12.53□□□□□ -0.4
CNOT4-203ENST00000361528 USP11P51784 963 aa12.53□□□□□ -0.4
CNOT4-203ENST00000361528 PSMC1P62191 440 aaKnown RBP12.53□□□□□ -0.4
CNOT4-203ENST00000361528 DCTN2Q13561 401 aaKnown RBP12.53□□□□□ -0.4
CNOT4-203ENST00000361528 LRRC74BQ6ZQY2 392 aa12.53□□□□□ -0.4
CNOT4-203ENST00000361528 SPATA31D4Q6ZUB0 917 aa12.53□□□□□ -0.4
CNOT4-203ENST00000361528 SCFD2Q8WU76 684 aa12.53□□□□□ -0.4
CNOT4-203ENST00000361528 TAOK3Q9H2K8 898 aa12.53□□□□□ -0.4
CNOT4-203ENST00000361528 SLITRK6Q9H5Y7 841 aa12.53□□□□□ -0.4
CNOT4-203ENST00000361528 PFDN4Q9NQP4 134 aa12.53□□□□□ -0.4
CNOT4-203ENST00000361528 AGPAT5Q9NUQ2 364 aa12.53□□□□□ -0.4
CNOT4-203ENST00000361528 MAGEC2Q9UBF1 373 aaPredicted RBP12.53□□□□□ -0.4
CNOT4-203ENST00000361528 PA2G4Q9UQ80 394 aaKnown RBP12.53□□□□□ -0.4
CNOT4-203ENST00000361528 USH1CQ9Y6N9 552 aa12.53□□□□□ -0.4
CNOT4-203ENST00000361528 PLEKHG1Q9ULL1 1385 aa12.52□□□□□ -0.4
CNOT4-203ENST00000361528 MYPNQ86TC9 1320 aa12.52□□□□□ -0.4
CNOT4-203ENST00000361528 KANSL1LA0AUZ9 987 aa12.52□□□□□ -0.41
CNOT4-203ENST00000361528 LSM1O15116 133 aaKnown RBP12.52□□□□□ -0.41
CNOT4-203ENST00000361528 PDGFRBP09619 1106 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms