RNA–Protein interactions for RNA: ENST00000361308.8

LMNA-202, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 1,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-202ENST00000361308 UNC93B1Q9H1C4 597 aa18.97■□□□□ 0.63
LMNA-202ENST00000361308 UPF3AQ9H1J1 476 aaKnown RBP18.97■□□□□ 0.63
LMNA-202ENST00000361308 CUEDC2Q9H467 287 aa18.97■□□□□ 0.63
LMNA-202ENST00000361308 IGSF9BQ9UPX0 1349 aa18.97■□□□□ 0.63
LMNA-202ENST00000361308 HTTP42858 3142 aa18.97■□□□□ 0.63
LMNA-202ENST00000361308 ZEB2O60315 1214 aa18.97■□□□□ 0.63
LMNA-202ENST00000361308 MYCNP04198 464 aaPredicted RBP18.97■□□□□ 0.63
LMNA-202ENST00000361308 XRCC6P12956 609 aaKnown RBP eCLIP18.97■□□□□ 0.636e-7■■■■□ 20.4
LMNA-202ENST00000361308 YWHABP31946 246 aaKnown RBP18.97■□□□□ 0.63
LMNA-202ENST00000361308 SLC26A2P50443 739 aa18.97■□□□□ 0.63
LMNA-202ENST00000361308 NKX3-2P78367 333 aa18.97■□□□□ 0.63
LMNA-202ENST00000361308 IRX5P78411 483 aaPredicted RBP18.97■□□□□ 0.63
LMNA-202ENST00000361308 KLHL40Q2TBA0 621 aa18.97■□□□□ 0.63
LMNA-202ENST00000361308 KRBA2Q6ZNG9 492 aa18.97■□□□□ 0.63
LMNA-202ENST00000361308 KCNK18Q7Z418 384 aa18.97■□□□□ 0.63
LMNA-202ENST00000361308 TRIM50Q86XT4 487 aa18.97■□□□□ 0.63
LMNA-202ENST00000361308 RNF208Q9H0X6 261 aa18.97■□□□□ 0.63
LMNA-202ENST00000361308 ERAP1Q9NZ08 941 aa18.97■□□□□ 0.63
LMNA-202ENST00000361308 ZBTB39O15060 712 aa18.96■□□□□ 0.63
LMNA-202ENST00000361308 CTAGE5O15320 804 aa18.96■□□□□ 0.63
LMNA-202ENST00000361308 ZNF862O60290 1169 aa18.96■□□□□ 0.63
LMNA-202ENST00000361308 ADAMTS4O75173 837 aa18.96■□□□□ 0.63
LMNA-202ENST00000361308 MTFR1Q15390 333 aa18.96■□□□□ 0.63
LMNA-202ENST00000361308 LHX8Q68G74 356 aa18.96■□□□□ 0.63
LMNA-202ENST00000361308 KANK3Q6NY19 840 aa18.96■□□□□ 0.63
LMNA-202ENST00000361308 OTUD6AQ7L8S5 288 aa18.96■□□□□ 0.63
LMNA-202ENST00000361308 LARP4BQ92615 738 aaKnown RBP18.96■□□□□ 0.63
LMNA-202ENST00000361308 RAD54LQ92698 747 aa18.96■□□□□ 0.63
LMNA-202ENST00000361308 C16orf70Q9BSU1 422 aa18.96■□□□□ 0.63
LMNA-202ENST00000361308 BLOC1S4Q9NUP1 217 aa18.96■□□□□ 0.63
LMNA-202ENST00000361308 ZNF215Q9UL58 517 aaPredicted RBP18.96■□□□□ 0.63
LMNA-202ENST00000361308 H3BRB1 525 aa18.95■□□□□ 0.62
LMNA-202ENST00000361308 ACTN4O43707 911 aaKnown RBP18.95■□□□□ 0.62
LMNA-202ENST00000361308 KPNA6O60684 536 aa18.95■□□□□ 0.62
LMNA-202ENST00000361308 MYL3P08590 195 aa18.95■□□□□ 0.62
LMNA-202ENST00000361308 ZNF286BP0CG31 522 aa18.95■□□□□ 0.62
LMNA-202ENST00000361308 CCL5P13501 91 aa18.95■□□□□ 0.62
LMNA-202ENST00000361308 ATP4AP20648 1035 aa18.95■□□□□ 0.62
LMNA-202ENST00000361308 MARK3P27448 753 aa18.95■□□□□ 0.62
LMNA-202ENST00000361308 PRKCEQ02156 737 aa18.95■□□□□ 0.62
LMNA-202ENST00000361308 DHX8Q14562 1220 aaKnown RBP18.95■□□□□ 0.62
LMNA-202ENST00000361308 XKR3Q5GH77 459 aa18.95■□□□□ 0.62
LMNA-202ENST00000361308 SV2BQ7L1I2 683 aa18.95■□□□□ 0.62
LMNA-202ENST00000361308 RNF180Q86T96 592 aa18.95■□□□□ 0.62
LMNA-202ENST00000361308 LRRC15Q8TF66 581 aa18.95■□□□□ 0.62
LMNA-202ENST00000361308 BHMT2Q9H2M3 363 aa18.95■□□□□ 0.62
LMNA-202ENST00000361308 TUT1Q9H6E5 874 aaKnown RBP18.95■□□□□ 0.62
LMNA-202ENST00000361308 PAK6Q9NQU5 681 aaPredicted RBP18.95■□□□□ 0.62
LMNA-202ENST00000361308 NRBP2Q9NSY0 501 aa18.95■□□□□ 0.62
LMNA-202ENST00000361308 MYADML2A6NDP7 307 aa18.94■□□□□ 0.62
LMNA-202ENST00000361308 EYA4O95677 639 aa18.94■□□□□ 0.62
LMNA-202ENST00000361308 OATP04181 439 aa18.94■□□□□ 0.62
LMNA-202ENST00000361308 SSBP05455 408 aaKnown RBP eCLIP18.94■□□□□ 0.62
LMNA-202ENST00000361308 PLA2G4BP0C869 781 aa18.94■□□□□ 0.62
LMNA-202ENST00000361308 MCM6Q14566 821 aa18.94■□□□□ 0.62
LMNA-202ENST00000361308 CCDC43Q96MW1 224 aaKnown RBP18.94■□□□□ 0.62
LMNA-202ENST00000361308 MAGEF1Q9HAY2 307 aa18.94■□□□□ 0.62
LMNA-202ENST00000361308 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.94■□□□□ 0.62
LMNA-202ENST00000361308 AMPD3Q01432 767 aa18.94■□□□□ 0.62
LMNA-202ENST00000361308 ANO5Q75V66 913 aa18.94■□□□□ 0.62
LMNA-202ENST00000361308 SYT2Q8N9I0 419 aaPredicted RBP18.94■□□□□ 0.62
LMNA-202ENST00000361308 PCSK9Q8NBP7 692 aaKnown RBP18.94■□□□□ 0.62
LMNA-202ENST00000361308 KLHDC9Q8NEP7 349 aa18.94■□□□□ 0.62
LMNA-202ENST00000361308 BBXQ8WY36 941 aaPredicted RBP18.94■□□□□ 0.62
LMNA-202ENST00000361308 ARMC5Q96C12 935 aa18.94■□□□□ 0.62
LMNA-202ENST00000361308 PAGE5Q96GU1 130 aa18.94■□□□□ 0.62
LMNA-202ENST00000361308 ZNF333Q96JL9 665 aa18.94■□□□□ 0.62
LMNA-202ENST00000361308 FAM167AQ96KS9 214 aa18.94■□□□□ 0.62
LMNA-202ENST00000361308 DEFB118Q96PH6 123 aa18.94■□□□□ 0.62
LMNA-202ENST00000361308 ANKEF1Q9NU02 776 aa18.94■□□□□ 0.62
LMNA-202ENST00000361308 SEPT9Q9UHD8 586 aaPredicted RBP18.94■□□□□ 0.62
LMNA-202ENST00000361308 HOOK1Q9UJC3 728 aaKnown RBP18.94■□□□□ 0.62
LMNA-202ENST00000361308 DBR1Q9UK59 544 aaKnown RBP18.94■□□□□ 0.62
LMNA-202ENST00000361308 STBD1O95210 358 aa18.93■□□□□ 0.62
LMNA-202ENST00000361308 CST5P28325 142 aaPredicted RBP18.93■□□□□ 0.62
LMNA-202ENST00000361308 AFMP43652 599 aa18.93■□□□□ 0.62
LMNA-202ENST00000361308 PURAQ00577 322 aaKnown RBP18.93■□□□□ 0.62
LMNA-202ENST00000361308 CAMK4Q16566 473 aa18.93■□□□□ 0.62
LMNA-202ENST00000361308 XKR9Q5GH70 373 aa18.93■□□□□ 0.62
LMNA-202ENST00000361308 ARRDC4Q8NCT1 418 aa18.93■□□□□ 0.62
LMNA-202ENST00000361308 ATP8B4Q8TF62 1192 aa18.93■□□□□ 0.62
LMNA-202ENST00000361308 STAMQ92783 540 aa18.93■□□□□ 0.62
LMNA-202ENST00000361308 SYAP1Q96A49 352 aaPredicted RBP18.93■□□□□ 0.62
LMNA-202ENST00000361308 LRRC27Q9C0I9 530 aa18.93■□□□□ 0.62
LMNA-202ENST00000361308 TNMDQ9H2S6 317 aa18.93■□□□□ 0.62
LMNA-202ENST00000361308 RNPEPQ9H4A4 650 aa18.93■□□□□ 0.62
LMNA-202ENST00000361308 KBTBD4Q9NVX7 518 aa18.93■□□□□ 0.62
LMNA-202ENST00000361308 RARRES1P49788 294 aa18.92■□□□□ 0.62
LMNA-202ENST00000361308 SLC12A3P55017 1021 aa18.92■□□□□ 0.62
LMNA-202ENST00000361308 PLCB4Q15147 1175 aa18.92■□□□□ 0.62
LMNA-202ENST00000361308 KCNA10Q16322 511 aa18.92■□□□□ 0.62
LMNA-202ENST00000361308 CAVIN1Q6NZI2 390 aaKnown RBP18.92■□□□□ 0.62
LMNA-202ENST00000361308 ELOA2Q8IYF1 753 aaPredicted RBP18.92■□□□□ 0.62
LMNA-202ENST00000361308 CEP170P1Q96L14 293 aa18.92■□□□□ 0.62
LMNA-202ENST00000361308 SH2D3AQ9BRG2 576 aa18.92■□□□□ 0.62
LMNA-202ENST00000361308 KATNAL1Q9BW62 490 aa18.92■□□□□ 0.62
LMNA-202ENST00000361308 NIFKQ9BYG3 293 aaKnown RBP18.92■□□□□ 0.62
LMNA-202ENST00000361308 NUP62CLQ9H1M0 184 aa18.92■□□□□ 0.62
LMNA-202ENST00000361308 TRPC6Q9Y210 931 aa18.92■□□□□ 0.62
LMNA-202ENST00000361308 ARHGEF35A5YM69 484 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms