RNA–Protein interactions for RNA: ENST00000360524.12

CCDC144A-204, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC144A, Length 5,830 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-204ENST00000360524 NCAPD2Q15021 1401 aa13.15□□□□□ -0.3
CCDC144A-204ENST00000360524 SEPT2Q15019 361 aa13.15□□□□□ -0.3
CCDC144A-204ENST00000360524 Q3C1V9 767 aa13.15□□□□□ -0.3
CCDC144A-204ENST00000360524 PIK3R5Q8WYR1 880 aa13.15□□□□□ -0.3
CCDC144A-204ENST00000360524 ANGPTL2Q9UKU9 493 aa13.15□□□□□ -0.3
CCDC144A-204ENST00000360524 LRFN2Q9ULH4 789 aa13.15□□□□□ -0.3
CCDC144A-204ENST00000360524 SRGAP2O75044 1071 aa13.15□□□□□ -0.3
CCDC144A-204ENST00000360524 SASH1O94885 1247 aa13.15□□□□□ -0.3
CCDC144A-204ENST00000360524 PLCG1P19174 1290 aa13.15□□□□□ -0.3
CCDC144A-204ENST00000360524 CD58P19256 250 aa13.15□□□□□ -0.3
CCDC144A-204ENST00000360524 SCARA5Q6ZMJ2 495 aa13.15□□□□□ -0.3
CCDC144A-204ENST00000360524 CNOT10Q9H9A5 744 aaKnown RBP13.15□□□□□ -0.3
CCDC144A-204ENST00000360524 ATICP31939 592 aa13.15□□□□□ -0.3
CCDC144A-204ENST00000360524 LIFRP42702 1097 aa13.15□□□□□ -0.3
CCDC144A-204ENST00000360524 FKBP3Q00688 224 aaKnown RBP13.15□□□□□ -0.3
CCDC144A-204ENST00000360524 PPP1R2P3Q6NXS1 205 aa13.15□□□□□ -0.3
CCDC144A-204ENST00000360524 ABCF3Q9NUQ8 709 aa13.15□□□□□ -0.3
CCDC144A-204ENST00000360524 GOLGA8IPA6NC78 632 aa13.15□□□□□ -0.3
CCDC144A-204ENST00000360524 GOLGA8JA6NMD2 632 aa13.15□□□□□ -0.3
CCDC144A-204ENST00000360524 MTERF2Q49AM1 385 aa13.15□□□□□ -0.3
CCDC144A-204ENST00000360524 ALS2CLQ60I27 953 aa13.15□□□□□ -0.3
CCDC144A-204ENST00000360524 NCAPGQ9BPX3 1015 aa13.15□□□□□ -0.3
CCDC144A-204ENST00000360524 ZCCHC11Q5TAX3 1644 aaKnown RBP13.15□□□□□ -0.31
CCDC144A-204ENST00000360524 MAP3K4Q9Y6R4 1608 aa13.15□□□□□ -0.31
CCDC144A-204ENST00000360524 GNGT2O14610 69 aa13.14□□□□□ -0.31
CCDC144A-204ENST00000360524 RESTQ13127 1097 aa13.14□□□□□ -0.31
CCDC144A-204ENST00000360524 PSMD2Q13200 908 aa13.14□□□□□ -0.31
CCDC144A-204ENST00000360524 C10orf76Q5T2E6 689 aa13.14□□□□□ -0.31
CCDC144A-204ENST00000360524 TTLL6Q8N841 843 aa13.14□□□□□ -0.31
CCDC144A-204ENST00000360524 KDM6BO15054 1643 aa13.14□□□□□ -0.31
CCDC144A-204ENST00000360524 GOLGA8CPA6NN73 597 aa13.14□□□□□ -0.31
CCDC144A-204ENST00000360524 RPS6KA4O75676 772 aa13.14□□□□□ -0.31
CCDC144A-204ENST00000360524 NDUFA10O95299 355 aa13.14□□□□□ -0.31
CCDC144A-204ENST00000360524 NCF2P19878 526 aaPredicted RBP13.14□□□□□ -0.31
CCDC144A-204ENST00000360524 NT5C2P49902 561 aa13.14□□□□□ -0.31
CCDC144A-204ENST00000360524 SLFNL1Q499Z3 407 aa13.14□□□□□ -0.31
CCDC144A-204ENST00000360524 GPR101Q96P66 508 aaPredicted RBP13.14□□□□□ -0.31
CCDC144A-204ENST00000360524 NFU1Q9UMS0 254 aa13.14□□□□□ -0.31
CCDC144A-204ENST00000360524 SRPRBQ9Y5M8 271 aaKnown RBP13.14□□□□□ -0.31
CCDC144A-204ENST00000360524 ZSCAN20P17040 1043 aaPredicted RBP13.14□□□□□ -0.31
CCDC144A-204ENST00000360524 HOXA7P31268 230 aaPredicted RBP13.14□□□□□ -0.31
CCDC144A-204ENST00000360524 DR1Q01658 176 aa13.14□□□□□ -0.31
CCDC144A-204ENST00000360524 GRAMD4Q6IC98 578 aa13.14□□□□□ -0.31
CCDC144A-204ENST00000360524 ZC3H18Q86VM9 953 aaKnown RBP13.14□□□□□ -0.31
CCDC144A-204ENST00000360524 GSPT2Q8IYD1 628 aaKnown RBP13.14□□□□□ -0.31
CCDC144A-204ENST00000360524 DEPDC1BQ8WUY9 529 aa13.14□□□□□ -0.31
CCDC144A-204ENST00000360524 MAML1Q92585 1016 aa13.14□□□□□ -0.31
CCDC144A-204ENST00000360524 BRIP1Q9BX63 1249 aa13.14□□□□□ -0.31
CCDC144A-204ENST00000360524 DRC3Q9H069 523 aa13.14□□□□□ -0.31
CCDC144A-204ENST00000360524 SLC38A10Q9HBR0 1119 aa13.14□□□□□ -0.31
CCDC144A-204ENST00000360524 ANGPTL3Q9Y5C1 460 aa13.14□□□□□ -0.31
CCDC144A-204ENST00000360524 PLA2G4BP0C869 781 aa13.14□□□□□ -0.31
CCDC144A-204ENST00000360524 HAUS8Q9BT25 410 aa13.14□□□□□ -0.31
CCDC144A-204ENST00000360524 CALN1Q9BXU9 219 aa13.14□□□□□ -0.31
CCDC144A-204ENST00000360524 PARVGQ9HBI0 331 aa13.14□□□□□ -0.31
CCDC144A-204ENST00000360524 EMILIN3Q9NT22 766 aa13.14□□□□□ -0.31
CCDC144A-204ENST00000360524 NXF1Q9UBU9 619 aaKnown RBP13.14□□□□□ -0.31
CCDC144A-204ENST00000360524 ATF5Q9Y2D1 282 aaPredicted RBP13.14□□□□□ -0.31
CCDC144A-204ENST00000360524 MED7O43513 233 aa13.14□□□□□ -0.31
CCDC144A-204ENST00000360524 SERPING1P05155 500 aa13.14□□□□□ -0.31
CCDC144A-204ENST00000360524 CUL4AQ13619 759 aa13.14□□□□□ -0.31
CCDC144A-204ENST00000360524 CAPRIN2Q6IMN6 1127 aaKnown RBP13.14□□□□□ -0.31
CCDC144A-204ENST00000360524 DNAAF3Q8N9W5 541 aa13.14□□□□□ -0.31
CCDC144A-204ENST00000360524 THAP9Q9H5L6 903 aa13.14□□□□□ -0.31
CCDC144A-204ENST00000360524 MCF2LO15068 1137 aa13.13□□□□□ -0.31
CCDC144A-204ENST00000360524 PDHA1P08559 390 aa13.13□□□□□ -0.31
CCDC144A-204ENST00000360524 TFAMQ00059 246 aaKnown RBP13.13□□□□□ -0.31
CCDC144A-204ENST00000360524 NBPF9Q3BBW0 867 aa13.13□□□□□ -0.31
CCDC144A-204ENST00000360524 BBS5Q8N3I7 341 aa13.13□□□□□ -0.31
CCDC144A-204ENST00000360524 FAM167BQ9BTA0 163 aa13.13□□□□□ -0.31
CCDC144A-204ENST00000360524 ZWILCHQ9H900 591 aa13.13□□□□□ -0.31
CCDC144A-204ENST00000360524 RCOR1Q9UKL0 485 aa13.13□□□□□ -0.31
CCDC144A-204ENST00000360524 INPP5FQ9Y2H2 1132 aa13.13□□□□□ -0.31
CCDC144A-204ENST00000360524 TYW5A2RUC4 315 aaKnown RBP13.13□□□□□ -0.31
CCDC144A-204ENST00000360524 SFI1A8K8P3 1242 aa13.13□□□□□ -0.31
CCDC144A-204ENST00000360524 CFLARO15519 480 aa13.13□□□□□ -0.31
CCDC144A-204ENST00000360524 MT-ND3P03897 115 aa13.13□□□□□ -0.31
CCDC144A-204ENST00000360524 CTTNQ14247 550 aaKnown RBP13.13□□□□□ -0.31
CCDC144A-204ENST00000360524 ARHGEF18Q6ZSZ5 1173 aa13.13□□□□□ -0.31
CCDC144A-204ENST00000360524 RSRC2Q7L4I2 434 aaKnown RBP13.13□□□□□ -0.31
CCDC144A-204ENST00000360524 HSPH1Q92598 858 aa13.13□□□□□ -0.31
CCDC144A-204ENST00000360524 FAM149B1Q96BN6 582 aa13.13□□□□□ -0.31
CCDC144A-204ENST00000360524 SH3GLB2Q9NR46 395 aa13.13□□□□□ -0.31
CCDC144A-204ENST00000360524 ZNF521Q96K83 1311 aa13.13□□□□□ -0.31
CCDC144A-204ENST00000360524 MMP10P09238 476 aa13.13□□□□□ -0.31
CCDC144A-204ENST00000360524 SRGAP2BP0DMP2 458 aa13.13□□□□□ -0.31
CCDC144A-204ENST00000360524 EEF1DP29692 281 aaKnown RBP13.13□□□□□ -0.31
CCDC144A-204ENST00000360524 TMEM179Q6ZVK1 233 aa13.13□□□□□ -0.31
CCDC144A-204ENST00000360524 RAB44Q7Z6P3 723 aaPredicted RBP13.13□□□□□ -0.31
CCDC144A-204ENST00000360524 ATP6V1E2Q96A05 226 aa13.13□□□□□ -0.31
CCDC144A-204ENST00000360524 CXorf56Q9H5V9 222 aa13.13□□□□□ -0.31
CCDC144A-204ENST00000360524 GJB4Q9NTQ9 266 aa13.13□□□□□ -0.31
CCDC144A-204ENST00000360524 ZNF335Q9H4Z2 1342 aaPredicted RBP13.13□□□□□ -0.31
CCDC144A-204ENST00000360524 CPSF1Q10570 1443 aaKnown RBP13.13□□□□□ -0.31
CCDC144A-204ENST00000360524 PRDM15P57071 1507 aaPredicted RBP13.13□□□□□ -0.31
CCDC144A-204ENST00000360524 TADA3O75528 432 aa13.13□□□□□ -0.31
CCDC144A-204ENST00000360524 ACSL3O95573 720 aa13.13□□□□□ -0.31
CCDC144A-204ENST00000360524 MCAMP43121 646 aa13.13□□□□□ -0.31
CCDC144A-204ENST00000360524 STX1BP61266 288 aa13.13□□□□□ -0.31
CCDC144A-204ENST00000360524 PDCLQ13371 301 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms