RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 BARX2Q9UMQ3 279 aaPredicted RBP6.99□□□□□ -1.29
CDC42SE2-201ENST00000360515 CCND2P30279 289 aa6.99□□□□□ -1.29
CDC42SE2-201ENST00000360515 BTG3Q14201 252 aaPredicted RBP6.99□□□□□ -1.29
CDC42SE2-201ENST00000360515 NSMFQ6X4W1 530 aa6.99□□□□□ -1.29
CDC42SE2-201ENST00000360515 KCTD1Q719H9 257 aa6.99□□□□□ -1.29
CDC42SE2-201ENST00000360515 RSPH3Q86UC2 560 aa6.99□□□□□ -1.29
CDC42SE2-201ENST00000360515 ZNF598Q86UK7 904 aaKnown RBP6.99□□□□□ -1.29
CDC42SE2-201ENST00000360515 PI4K2BQ8TCG2 481 aa6.99□□□□□ -1.29
CDC42SE2-201ENST00000360515 CASD1Q96PB1 797 aa6.99□□□□□ -1.29
CDC42SE2-201ENST00000360515 TMEM117Q9H0C3 514 aa6.99□□□□□ -1.29
CDC42SE2-201ENST00000360515 TLE6Q9H808 572 aa6.99□□□□□ -1.29
CDC42SE2-201ENST00000360515 TRPV5Q9NQA5 729 aa6.99□□□□□ -1.29
CDC42SE2-201ENST00000360515 PCDHB12Q9Y5F1 795 aa6.99□□□□□ -1.29
CDC42SE2-201ENST00000360515 FGF18O76093 207 aa6.99□□□□□ -1.29
CDC42SE2-201ENST00000360515 PROS1P07225 676 aa6.99□□□□□ -1.29
CDC42SE2-201ENST00000360515 IFIT2P09913 472 aaKnown RBP6.99□□□□□ -1.29
CDC42SE2-201ENST00000360515 SRFP11831 508 aa6.99□□□□□ -1.29
CDC42SE2-201ENST00000360515 SCG2P13521 617 aa6.99□□□□□ -1.29
CDC42SE2-201ENST00000360515 RSPO4Q2I0M5 234 aaPredicted RBP6.99□□□□□ -1.29
CDC42SE2-201ENST00000360515 BCL11AQ9H165 835 aa6.99□□□□□ -1.29
CDC42SE2-201ENST00000360515 HOMER2Q9NSB8 354 aa6.99□□□□□ -1.29
CDC42SE2-201ENST00000360515 ERVFC1P60507 584 aa6.98□□□□□ -1.29
CDC42SE2-201ENST00000360515 PRKCQQ04759 706 aa6.98□□□□□ -1.29
CDC42SE2-201ENST00000360515 OS9Q13438 667 aaPredicted RBP6.98□□□□□ -1.29
CDC42SE2-201ENST00000360515 TTBK2Q6IQ55 1244 aa6.98□□□□□ -1.29
CDC42SE2-201ENST00000360515 RMDN3Q96TC7 470 aa6.98□□□□□ -1.29
CDC42SE2-201ENST00000360515 MTA3Q9BTC8 594 aa6.98□□□□□ -1.29
CDC42SE2-201ENST00000360515 SFXN1Q9H9B4 322 aa6.98□□□□□ -1.29
CDC42SE2-201ENST00000360515 CACNA2D2Q9NY47 1150 aa6.98□□□□□ -1.29
CDC42SE2-201ENST00000360515 TNNQ9UQP3 1299 aa6.98□□□□□ -1.29
CDC42SE2-201ENST00000360515 NOTCH4Q99466 2003 aa6.98□□□□□ -1.29
CDC42SE2-201ENST00000360515 RLBP1P12271 317 aa6.98□□□□□ -1.29
CDC42SE2-201ENST00000360515 OTOP3Q7RTS5 596 aa6.98□□□□□ -1.29
CDC42SE2-201ENST00000360515 DDX53Q86TM3 631 aaKnown RBP6.98□□□□□ -1.29
CDC42SE2-201ENST00000360515 CAPNS1P04632 268 aa6.98□□□□□ -1.29
CDC42SE2-201ENST00000360515 ZNF286BP0CG31 522 aa6.98□□□□□ -1.29
CDC42SE2-201ENST00000360515 KCNA2P16389 499 aa6.98□□□□□ -1.29
CDC42SE2-201ENST00000360515 RUFY4Q6ZNE9 571 aa6.98□□□□□ -1.29
CDC42SE2-201ENST00000360515 SPATA33Q96N06 139 aa6.98□□□□□ -1.29
CDC42SE2-201ENST00000360515 RXFP1Q9HBX9 757 aa6.98□□□□□ -1.29
CDC42SE2-201ENST00000360515 DDX49Q9Y6V7 483 aaKnown RBP6.98□□□□□ -1.29
CDC42SE2-201ENST00000360515 PTPDC1A2A3K4 754 aa6.97□□□□□ -1.29
CDC42SE2-201ENST00000360515 SOBPA7XYQ1 873 aa6.97□□□□□ -1.29
CDC42SE2-201ENST00000360515 EEPD1Q7L9B9 569 aa6.97□□□□□ -1.29
CDC42SE2-201ENST00000360515 NIPA1Q7RTP0 329 aa6.97□□□□□ -1.29
CDC42SE2-201ENST00000360515 TNPO1Q92973 898 aaKnown RBP6.97□□□□□ -1.29
CDC42SE2-201ENST00000360515 MBOAT7Q96N66 472 aa6.97□□□□□ -1.29
CDC42SE2-201ENST00000360515 JMJD4Q9H9V9 463 aa6.97□□□□□ -1.29
CDC42SE2-201ENST00000360515 PALM3A6NDB9 673 aaPredicted RBP6.97□□□□□ -1.29
CDC42SE2-201ENST00000360515 MRPS9P82933 396 aaKnown RBP6.97□□□□□ -1.29
CDC42SE2-201ENST00000360515 IER5Q5VY09 327 aa6.97□□□□□ -1.29
CDC42SE2-201ENST00000360515 SLC24A5Q71RS6 500 aa6.97□□□□□ -1.29
CDC42SE2-201ENST00000360515 CDHR1Q96JP9 859 aa6.97□□□□□ -1.29
CDC42SE2-201ENST00000360515 DCTPP1Q9H773 170 aa6.97□□□□□ -1.29
CDC42SE2-201ENST00000360515 AGO3Q9H9G7 860 aaKnown RBP6.97□□□□□ -1.29
CDC42SE2-201ENST00000360515 GGPS1O95749 300 aa6.97□□□□□ -1.29
CDC42SE2-201ENST00000360515 CTSAP10619 480 aa6.97□□□□□ -1.29
CDC42SE2-201ENST00000360515 CDC37Q16543 378 aaPredicted RBP6.97□□□□□ -1.29
CDC42SE2-201ENST00000360515 PPP4R3CPQ6ZMV5 832 aa6.97□□□□□ -1.29
CDC42SE2-201ENST00000360515 LRRC55Q6ZSA7 311 aa6.97□□□□□ -1.29
CDC42SE2-201ENST00000360515 PJA1Q8NG27 643 aa6.97□□□□□ -1.29
CDC42SE2-201ENST00000360515 CELF4Q9BZC1 486 aaKnown RBP6.97□□□□□ -1.29
CDC42SE2-201ENST00000360515 ZSCAN32Q9NX65 697 aa6.97□□□□□ -1.29
CDC42SE2-201ENST00000360515 MTUS1Q9ULD2 1270 aa6.97□□□□□ -1.29
CDC42SE2-201ENST00000360515 UBIAD1Q9Y5Z9 338 aa6.97□□□□□ -1.29
CDC42SE2-201ENST00000360515 GSTTP1A0A1W2PQM5 241 aa6.96□□□□□ -1.29
CDC42SE2-201ENST00000360515 TAF4O00268 1085 aa6.96□□□□□ -1.29
CDC42SE2-201ENST00000360515 MICAL2O94851 1124 aa6.96□□□□□ -1.29
CDC42SE2-201ENST00000360515 CALML3P27482 149 aa6.96□□□□□ -1.29
CDC42SE2-201ENST00000360515 CNR2P34972 360 aa6.96□□□□□ -1.29
CDC42SE2-201ENST00000360515 SLFNL1Q499Z3 407 aa6.96□□□□□ -1.29
CDC42SE2-201ENST00000360515 C1orf210Q8IVY1 113 aa6.96□□□□□ -1.29
CDC42SE2-201ENST00000360515 ADGRF4Q8IZF3 695 aa6.96□□□□□ -1.29
CDC42SE2-201ENST00000360515 MAP4K1Q92918 833 aa6.96□□□□□ -1.29
CDC42SE2-201ENST00000360515 LOXL4Q96JB6 756 aa6.96□□□□□ -1.29
CDC42SE2-201ENST00000360515 EXOC6BQ9Y2D4 811 aa6.96□□□□□ -1.29
CDC42SE2-201ENST00000360515 MRVI1Q9Y6F6 885 aa6.96□□□□□ -1.29
CDC42SE2-201ENST00000360515 CDY2AQ9Y6F7 541 aa6.96□□□□□ -1.29
CDC42SE2-201ENST00000360515 ZFHX4Q86UP3 3567 aa6.96□□□□□ -1.3
CDC42SE2-201ENST00000360515 KRBA1A5PL33 1030 aa6.96□□□□□ -1.3
CDC42SE2-201ENST00000360515 PI15O43692 258 aa6.96□□□□□ -1.3
CDC42SE2-201ENST00000360515 PPP1R11O60927 126 aaPredicted RBP6.96□□□□□ -1.3
CDC42SE2-201ENST00000360515 TECP42680 631 aa6.96□□□□□ -1.3
CDC42SE2-201ENST00000360515 NONOQ15233 471 aaKnown RBP eCLIP6.96□□□□□ -1.3
CDC42SE2-201ENST00000360515 LAIR1Q6GTX8 287 aa6.96□□□□□ -1.3
CDC42SE2-201ENST00000360515 LRRC43Q8N309 656 aa6.96□□□□□ -1.3
CDC42SE2-201ENST00000360515 MSANTD3Q96H12 275 aa6.96□□□□□ -1.3
CDC42SE2-201ENST00000360515 HOXA9P31269 272 aa6.95□□□□□ -1.3
CDC42SE2-201ENST00000360515 FZD5Q13467 585 aa6.95□□□□□ -1.3
CDC42SE2-201ENST00000360515 GNPTABQ3T906 1256 aa6.95□□□□□ -1.3
CDC42SE2-201ENST00000360515 ARHGEF16Q5VV41 709 aa6.95□□□□□ -1.3
CDC42SE2-201ENST00000360515 PCYT2Q99447 389 aa6.95□□□□□ -1.3
CDC42SE2-201ENST00000360515 TMEM175Q9BSA9 504 aa6.95□□□□□ -1.3
CDC42SE2-201ENST00000360515 LRRCC1Q9C099 1032 aa6.95□□□□□ -1.3
CDC42SE2-201ENST00000360515 ERAP1Q9NZ08 941 aa6.95□□□□□ -1.3
CDC42SE2-201ENST00000360515 CHGBP05060 677 aa6.95□□□□□ -1.3
CDC42SE2-201ENST00000360515 TDO2P48775 406 aa6.95□□□□□ -1.3
CDC42SE2-201ENST00000360515 CLCN4P51793 760 aa6.95□□□□□ -1.3
CDC42SE2-201ENST00000360515 QRICH1Q2TAL8 776 aa6.95□□□□□ -1.3
CDC42SE2-201ENST00000360515 CES5AQ6NT32 575 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms