RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 MUTP22033 750 aa28.95■■■□□ 2.23
CUEDC1-201ENST00000360238 APBA1Q02410 837 aa28.95■■■□□ 2.23
CUEDC1-201ENST00000360238 NAB2Q15742 525 aa28.95■■■□□ 2.23
CUEDC1-201ENST00000360238 KLHDC7AQ5VTJ3 777 aa28.95■■■□□ 2.23
CUEDC1-201ENST00000360238 LRCH2Q5VUJ6 765 aa28.95■■■□□ 2.23
CUEDC1-201ENST00000360238 RINT1Q6NUQ1 792 aa28.95■■■□□ 2.23
CUEDC1-201ENST00000360238 DPY19L2P1Q6NXN4 242 aa28.95■■■□□ 2.23
CUEDC1-201ENST00000360238 TBC1D5Q92609 795 aa28.95■■■□□ 2.23
CUEDC1-201ENST00000360238 TLR10Q9BXR5 811 aa28.95■■■□□ 2.23
CUEDC1-201ENST00000360238 ZNF70Q9UC06 446 aaPredicted RBP28.95■■■□□ 2.23
CUEDC1-201ENST00000360238 ANKRD13CQ8N6S4 541 aa28.95■■■□□ 2.22
CUEDC1-201ENST00000360238 FAM133AQ8N9E0 248 aa28.95■■■□□ 2.22
CUEDC1-201ENST00000360238 SPATA4Q8NEY3 305 aa28.95■■■□□ 2.22
CUEDC1-201ENST00000360238 FAM71BQ8TC56 605 aa28.95■■■□□ 2.22
CUEDC1-201ENST00000360238 GCNT3O95395 438 aa28.94■■■□□ 2.22
CUEDC1-201ENST00000360238 EPB41P11171 864 aaKnown RBP28.94■■■□□ 2.22
CUEDC1-201ENST00000360238 HSP90B2PQ58FF3 399 aa28.94■■■□□ 2.22
CUEDC1-201ENST00000360238 MRPL11Q9Y3B7 192 aaKnown RBP28.94■■■□□ 2.22
CUEDC1-201ENST00000360238 CNTNAP1P78357 1384 aa28.94■■■□□ 2.22
CUEDC1-201ENST00000360238 AKAP3O75969 853 aa28.94■■■□□ 2.22
CUEDC1-201ENST00000360238 EXOC3L4Q17RC7 722 aa28.94■■■□□ 2.22
CUEDC1-201ENST00000360238 CCDC181Q5TID7 509 aa28.94■■■□□ 2.22
CUEDC1-201ENST00000360238 RNF14Q9UBS8 474 aa28.94■■■□□ 2.22
CUEDC1-201ENST00000360238 FBXL5Q9UKA1 691 aa28.94■■■□□ 2.22
CUEDC1-201ENST00000360238 ADAM21Q9UKJ8 722 aa28.94■■■□□ 2.22
CUEDC1-201ENST00000360238 BZW2Q9Y6E2 419 aaKnown RBP28.94■■■□□ 2.22
CUEDC1-201ENST00000360238 CLRN2A0PK11 232 aa28.93■■■□□ 2.22
CUEDC1-201ENST00000360238 AARSP49588 968 aaKnown RBP eCLIP28.93■■■□□ 2.22
CUEDC1-201ENST00000360238 DLGAP5Q15398 846 aa28.93■■■□□ 2.22
CUEDC1-201ENST00000360238 NFIL3Q16649 462 aa28.93■■■□□ 2.22
CUEDC1-201ENST00000360238 CCNI2Q6ZMN8 369 aaPredicted RBP28.93■■■□□ 2.22
CUEDC1-201ENST00000360238 GMLQ99445 158 aa28.93■■■□□ 2.22
CUEDC1-201ENST00000360238 VCPKMTQ9H867 229 aa28.93■■■□□ 2.22
CUEDC1-201ENST00000360238 A0A087X0T9 212 aa28.92■■■□□ 2.22
CUEDC1-201ENST00000360238 BUB1O43683 1085 aa28.92■■■□□ 2.22
CUEDC1-201ENST00000360238 SLITRK3O94933 977 aa28.92■■■□□ 2.22
CUEDC1-201ENST00000360238 FAM228BP0C875 321 aa28.92■■■□□ 2.22
CUEDC1-201ENST00000360238 UCHL3P15374 230 aa28.92■■■□□ 2.22
CUEDC1-201ENST00000360238 PRELPP51888 382 aa28.92■■■□□ 2.22
CUEDC1-201ENST00000360238 SPDYE2Q495Y8 402 aa28.92■■■□□ 2.22
CUEDC1-201ENST00000360238 C10orf76Q5T2E6 689 aa28.92■■■□□ 2.22
CUEDC1-201ENST00000360238 FAM160B2Q86V87 743 aa28.92■■■□□ 2.22
CUEDC1-201ENST00000360238 PCDHGC5Q9Y5F6 944 aa28.92■■■□□ 2.22
CUEDC1-201ENST00000360238 UBE4BO95155 1302 aa28.92■■■□□ 2.22
CUEDC1-201ENST00000360238 C21orf2O43822 256 aa28.92■■■□□ 2.22
CUEDC1-201ENST00000360238 FAM13AO94988 1023 aa28.92■■■□□ 2.22
CUEDC1-201ENST00000360238 PAFAH1B1P43034 410 aa28.92■■■□□ 2.22
CUEDC1-201ENST00000360238 CTTNQ14247 550 aaKnown RBP28.92■■■□□ 2.22
CUEDC1-201ENST00000360238 CCDC174Q6PII3 467 aa28.92■■■□□ 2.22
CUEDC1-201ENST00000360238 FRMPD4Q14CM0 1322 aa28.92■■■□□ 2.22
CUEDC1-201ENST00000360238 GTPBP10A4D1E9 387 aaKnown RBP28.91■■■□□ 2.22
CUEDC1-201ENST00000360238 ERICH4A6NGS2 130 aa28.91■■■□□ 2.22
CUEDC1-201ENST00000360238 BTNL10A8MVZ5 291 aa28.91■■■□□ 2.22
CUEDC1-201ENST00000360238 VIL1P09327 827 aaKnown RBP28.91■■■□□ 2.22
CUEDC1-201ENST00000360238 PON1P27169 355 aa28.91■■■□□ 2.22
CUEDC1-201ENST00000360238 NAP1L1P55209 391 aaKnown RBP28.91■■■□□ 2.22
CUEDC1-201ENST00000360238 SETQ01105 290 aaPredicted RBP28.91■■■□□ 2.22
CUEDC1-201ENST00000360238 EPHA7Q15375 998 aa28.91■■■□□ 2.22
CUEDC1-201ENST00000360238 FKBP1CQ5VVH2 108 aa28.91■■■□□ 2.22
CUEDC1-201ENST00000360238 C1orf186Q6ZWK4 172 aa28.91■■■□□ 2.22
CUEDC1-201ENST00000360238 DYDC2Q96IM9 177 aa28.91■■■□□ 2.22
CUEDC1-201ENST00000360238 VPS18Q9P253 973 aa28.91■■■□□ 2.22
CUEDC1-201ENST00000360238 MYH11P35749 1972 aa28.91■■■□□ 2.22
CUEDC1-201ENST00000360238 ZMYM2Q9UBW7 1377 aa28.91■■■□□ 2.22
CUEDC1-201ENST00000360238 NCK2O43639 380 aa28.91■■■□□ 2.22
CUEDC1-201ENST00000360238 TBC1D12O60347 775 aa28.91■■■□□ 2.22
CUEDC1-201ENST00000360238 SLC9A1P19634 815 aa28.91■■■□□ 2.22
CUEDC1-201ENST00000360238 ANXA13P27216 316 aa28.91■■■□□ 2.22
CUEDC1-201ENST00000360238 TNNT3P45378 269 aaPredicted RBP28.91■■■□□ 2.22
CUEDC1-201ENST00000360238 ARID5AQ03989 594 aa28.91■■■□□ 2.22
CUEDC1-201ENST00000360238 CEP55Q53EZ4 464 aa28.91■■■□□ 2.22
CUEDC1-201ENST00000360238 TAF3Q5VWG9 929 aa28.91■■■□□ 2.22
CUEDC1-201ENST00000360238 CCDC102AQ96A19 550 aa28.91■■■□□ 2.22
CUEDC1-201ENST00000360238 SLC35C1Q96A29 364 aa28.91■■■□□ 2.22
CUEDC1-201ENST00000360238 SPAG5Q96R06 1193 aa28.91■■■□□ 2.22
CUEDC1-201ENST00000360238 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP28.91■■■□□ 2.22
CUEDC1-201ENST00000360238 WDR11Q9BZH6 1224 aa28.91■■■□□ 2.22
CUEDC1-201ENST00000360238 SEL1LQ9UBV2 794 aa28.91■■■□□ 2.22
CUEDC1-201ENST00000360238 ATP8B3O60423 1300 aa28.9■■■□□ 2.22
CUEDC1-201ENST00000360238 GAS7O60861 476 aa28.9■■■□□ 2.22
CUEDC1-201ENST00000360238 N4BP1O75113 896 aaKnown RBP28.9■■■□□ 2.22
CUEDC1-201ENST00000360238 ACTN1P12814 892 aa28.9■■■□□ 2.22
CUEDC1-201ENST00000360238 DCAF17Q5H9S7 520 aaPredicted RBP28.9■■■□□ 2.22
CUEDC1-201ENST00000360238 GBP6Q6ZN66 633 aa28.9■■■□□ 2.22
CUEDC1-201ENST00000360238 TPH2Q8IWU9 490 aa28.9■■■□□ 2.22
CUEDC1-201ENST00000360238 PIGOQ8TEQ8 1089 aa28.9■■■□□ 2.22
CUEDC1-201ENST00000360238 KCND2Q9NZV8 630 aa28.9■■■□□ 2.22
CUEDC1-201ENST00000360238 ADAMTS1Q9UHI8 967 aa28.9■■■□□ 2.22
CUEDC1-201ENST00000360238 HPCAL4Q9UM19 191 aa28.9■■■□□ 2.22
CUEDC1-201ENST00000360238 KLRC1P26715 233 aa28.89■■■□□ 2.22
CUEDC1-201ENST00000360238 IRF2BP2Q7Z5L9 587 aa28.89■■■□□ 2.22
CUEDC1-201ENST00000360238 OGFOD1Q8N543 542 aa28.89■■■□□ 2.22
CUEDC1-201ENST00000360238 PSMD1Q99460 953 aa28.89■■■□□ 2.22
CUEDC1-201ENST00000360238 CXCR5P32302 372 aa28.89■■■□□ 2.22
CUEDC1-201ENST00000360238 PRKCIP41743 596 aa28.89■■■□□ 2.22
CUEDC1-201ENST00000360238 KIAA0753Q2KHM9 967 aa28.89■■■□□ 2.22
CUEDC1-201ENST00000360238 PARVGQ9HBI0 331 aa28.89■■■□□ 2.22
CUEDC1-201ENST00000360238 TGFB1I1O43294 461 aa28.88■■■□□ 2.21
CUEDC1-201ENST00000360238 CHMP2AO43633 222 aa28.88■■■□□ 2.21
CUEDC1-201ENST00000360238 PALMO75781 387 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms