RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 RPS6KC1Q96S38 1066 aa12.41□□□□□ -0.42
CNOT3-202ENST00000358389 SEMA6BQ9H3T3 888 aa12.41□□□□□ -0.42
CNOT3-202ENST00000358389 ADAM22Q9P0K1 906 aa12.41□□□□□ -0.42
CNOT3-202ENST00000358389 SIK3Q9Y2K2 1263 aa12.41□□□□□ -0.42
CNOT3-202ENST00000358389 ATP6V0A2Q9Y487 856 aa12.41□□□□□ -0.42
CNOT3-202ENST00000358389 PCDHGC5Q9Y5F6 944 aa12.41□□□□□ -0.42
CNOT3-202ENST00000358389 MAGEB6P1A0A0J9YX57 407 aa12.41□□□□□ -0.42
CNOT3-202ENST00000358389 TMEM110-MUSTN1A8MSY1 372 aa12.41□□□□□ -0.42
CNOT3-202ENST00000358389 FLOT1O75955 427 aa12.41□□□□□ -0.42
CNOT3-202ENST00000358389 RARAP10276 462 aa12.41□□□□□ -0.42
CNOT3-202ENST00000358389 ABL2P42684 1182 aa12.41□□□□□ -0.42
CNOT3-202ENST00000358389 ZNF211Q13398 564 aaPredicted RBP12.41□□□□□ -0.42
CNOT3-202ENST00000358389 MKRN4PQ13434 485 aaPredicted RBP12.41□□□□□ -0.42
CNOT3-202ENST00000358389 PICALMQ13492 652 aa12.41□□□□□ -0.42
CNOT3-202ENST00000358389 SLC18A3Q16572 532 aa12.41□□□□□ -0.42
CNOT3-202ENST00000358389 TXNRD1Q16881 649 aa12.41□□□□□ -0.42
CNOT3-202ENST00000358389 VPS36Q86VN1 386 aa12.41□□□□□ -0.42
CNOT3-202ENST00000358389 SRBD1Q8N5C6 995 aaKnown RBP12.41□□□□□ -0.42
CNOT3-202ENST00000358389 GBP7Q8N8V2 638 aaPredicted RBP12.41□□□□□ -0.42
CNOT3-202ENST00000358389 CNBD1Q8NA66 436 aa12.41□□□□□ -0.42
CNOT3-202ENST00000358389 TTLL11Q8NHH1 800 aa12.41□□□□□ -0.42
CNOT3-202ENST00000358389 EZH1Q92800 747 aaPredicted RBP12.41□□□□□ -0.42
CNOT3-202ENST00000358389 ARHGEF2Q92974 986 aaKnown RBP12.41□□□□□ -0.42
CNOT3-202ENST00000358389 GBP5Q96PP8 586 aa12.41□□□□□ -0.42
CNOT3-202ENST00000358389 TMOD2Q9NZR1 351 aa12.41□□□□□ -0.42
CNOT3-202ENST00000358389 CETN3O15182 167 aa12.4□□□□□ -0.42
CNOT3-202ENST00000358389 FESP07332 822 aa12.4□□□□□ -0.42
CNOT3-202ENST00000358389 DR1Q01658 176 aa12.4□□□□□ -0.42
CNOT3-202ENST00000358389 PPP2R5BQ15173 497 aa12.4□□□□□ -0.42
CNOT3-202ENST00000358389 RGL1Q9NZL6 768 aa12.4□□□□□ -0.42
CNOT3-202ENST00000358389 AXIN2Q9Y2T1 843 aa12.4□□□□□ -0.42
CNOT3-202ENST00000358389 CCDC188H7C350 402 aa12.4□□□□□ -0.42
CNOT3-202ENST00000358389 CALM1P0DP23 149 aa12.4□□□□□ -0.42
CNOT3-202ENST00000358389 CALM2P0DP24 149 aa12.4□□□□□ -0.42
CNOT3-202ENST00000358389 CALM3P0DP25 149 aa12.4□□□□□ -0.42
CNOT3-202ENST00000358389 PHKG2P15735 406 aa12.4□□□□□ -0.42
CNOT3-202ENST00000358389 GNAT2P19087 354 aa12.4□□□□□ -0.42
CNOT3-202ENST00000358389 ZNF131P52739 623 aa12.4□□□□□ -0.42
CNOT3-202ENST00000358389 NAPAP54920 295 aa12.4□□□□□ -0.42
CNOT3-202ENST00000358389 MARCH10Q8NA82 808 aaPredicted RBP12.4□□□□□ -0.42
CNOT3-202ENST00000358389 U2AF1L4Q8WU68 220 aaKnown RBP12.4□□□□□ -0.42
CNOT3-202ENST00000358389 ITFG2Q969R8 447 aa12.4□□□□□ -0.42
CNOT3-202ENST00000358389 DNAJC17Q9NVM6 304 aaKnown RBP12.4□□□□□ -0.42
CNOT3-202ENST00000358389 SCOCQ9UIL1 159 aa12.4□□□□□ -0.42
CNOT3-202ENST00000358389 RASAL2Q9UJF2 1139 aa12.4□□□□□ -0.42
CNOT3-202ENST00000358389 TMEM2Q9UHN6 1383 aa12.4□□□□□ -0.42
CNOT3-202ENST00000358389 RTN3O95197 1032 aaPredicted RBP12.4□□□□□ -0.42
CNOT3-202ENST00000358389 BAG3O95817 575 aa12.4□□□□□ -0.42
CNOT3-202ENST00000358389 PAEPP09466 180 aa12.4□□□□□ -0.42
CNOT3-202ENST00000358389 MRPS35P82673 323 aaKnown RBP12.4□□□□□ -0.42
CNOT3-202ENST00000358389 ALX1Q15699 326 aa12.4□□□□□ -0.42
CNOT3-202ENST00000358389 RNF220Q5VTB9 566 aa12.4□□□□□ -0.42
CNOT3-202ENST00000358389 TMTC3Q6ZXV5 915 aa12.4□□□□□ -0.42
CNOT3-202ENST00000358389 SPATA21Q7Z572 469 aa12.4□□□□□ -0.42
CNOT3-202ENST00000358389 FGD4Q96M96 766 aa12.4□□□□□ -0.42
CNOT3-202ENST00000358389 ARPP21Q9UBL0 812 aaPredicted RBP12.4□□□□□ -0.42
CNOT3-202ENST00000358389 SNX3O60493 162 aa12.39□□□□□ -0.43
CNOT3-202ENST00000358389 PPP1R15BQ5SWA1 713 aa12.39□□□□□ -0.43
CNOT3-202ENST00000358389 C6orf118Q5T5N4 469 aa12.39□□□□□ -0.43
CNOT3-202ENST00000358389 ALKBH5Q6P6C2 394 aaKnown RBP12.39□□□□□ -0.43
CNOT3-202ENST00000358389 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.39□□□□□ -0.43
CNOT3-202ENST00000358389 TEX9Q8N6V9 391 aa12.39□□□□□ -0.43
CNOT3-202ENST00000358389 TBK1Q9UHD2 729 aa12.39□□□□□ -0.43
CNOT3-202ENST00000358389 AMFRQ9UKV5 643 aa12.39□□□□□ -0.43
CNOT3-202ENST00000358389 ADAMTS3O15072 1205 aa12.39□□□□□ -0.43
CNOT3-202ENST00000358389 ACSL3O95573 720 aa12.39□□□□□ -0.43
CNOT3-202ENST00000358389 PPP1R2P41236 205 aa12.39□□□□□ -0.43
CNOT3-202ENST00000358389 USP11P51784 963 aa12.39□□□□□ -0.43
CNOT3-202ENST00000358389 ARHGAP22Q7Z5H3 698 aa12.39□□□□□ -0.43
CNOT3-202ENST00000358389 ZC3H18Q86VM9 953 aaKnown RBP12.39□□□□□ -0.43
CNOT3-202ENST00000358389 ZNF317Q96PQ6 595 aaPredicted RBP12.39□□□□□ -0.43
CNOT3-202ENST00000358389 PTPN22Q9Y2R2 807 aa12.39□□□□□ -0.43
CNOT3-202ENST00000358389 USH1CQ9Y6N9 552 aa12.39□□□□□ -0.43
CNOT3-202ENST00000358389 DIP2CQ9Y2E4 1556 aa12.39□□□□□ -0.43
CNOT3-202ENST00000358389 BAP1Q92560 729 aa12.39□□□□□ -0.43
CNOT3-202ENST00000358389 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.39□□□□□ -0.43
CNOT3-202ENST00000358389 CEP72Q9P209 647 aa12.39□□□□□ -0.43
CNOT3-202ENST00000358389 AFF2P51816 1311 aa12.39□□□□□ -0.43
CNOT3-202ENST00000358389 HEG1Q9ULI3 1381 aa12.39□□□□□ -0.43
CNOT3-202ENST00000358389 HNRNPH3P31942 346 aaKnown RBP12.39□□□□□ -0.43
CNOT3-202ENST00000358389 ZRSR2Q15696 482 aaKnown RBP12.39□□□□□ -0.43
CNOT3-202ENST00000358389 DNAJC9Q8WXX5 260 aa12.39□□□□□ -0.43
CNOT3-202ENST00000358389 CTNNBL1Q8WYA6 563 aaPredicted RBP12.39□□□□□ -0.43
CNOT3-202ENST00000358389 ARL2BPQ9Y2Y0 163 aa12.39□□□□□ -0.43
CNOT3-202ENST00000358389 hCG_2014768A0A024R1R8 64 aa12.38□□□□□ -0.43
CNOT3-202ENST00000358389 A0A1B0GVG6 124 aa12.38□□□□□ -0.43
CNOT3-202ENST00000358389 A0A1W2PRG0 241 aa12.38□□□□□ -0.43
CNOT3-202ENST00000358389 TNNI2P48788 182 aa12.38□□□□□ -0.43
CNOT3-202ENST00000358389 RASGRF1Q13972 1273 aa12.38□□□□□ -0.43
CNOT3-202ENST00000358389 RCN2Q14257 317 aa12.38□□□□□ -0.43
CNOT3-202ENST00000358389 DCAF17Q5H9S7 520 aaPredicted RBP12.38□□□□□ -0.43
CNOT3-202ENST00000358389 FBXO25Q8TCJ0 367 aa12.38□□□□□ -0.43
CNOT3-202ENST00000358389 CNKSR1Q969H4 720 aa12.38□□□□□ -0.43
CNOT3-202ENST00000358389 TMEM237Q96Q45 408 aa12.38□□□□□ -0.43
CNOT3-202ENST00000358389 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.38□□□□□ -0.433e-7■■■■■ 46.3
CNOT3-202ENST00000358389 KBTBD4Q9NVX7 518 aa12.38□□□□□ -0.43
CNOT3-202ENST00000358389 NKIRAS1Q9NYS0 192 aa12.38□□□□□ -0.43
CNOT3-202ENST00000358389 ZMYND8Q9ULU4 1186 aaPredicted RBP12.38□□□□□ -0.43
CNOT3-202ENST00000358389 PDE8BO95263 885 aa12.38□□□□□ -0.43
CNOT3-202ENST00000358389 H2AFZP0C0S5 128 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms