RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 NBPF9Q3BBW0 867 aa13.62□□□□□ -0.23
BDNF-202ENST00000356660 CAPN12Q6ZSI9 719 aa13.62□□□□□ -0.23
BDNF-202ENST00000356660 EMILIN3Q9NT22 766 aa13.62□□□□□ -0.23
BDNF-202ENST00000356660 KLHL14Q9P2G3 628 aa13.62□□□□□ -0.23
BDNF-202ENST00000356660 LEMD3Q9Y2U8 911 aa13.62□□□□□ -0.23
BDNF-202ENST00000356660 MYH10P35580 1976 aa13.62□□□□□ -0.23
BDNF-202ENST00000356660 H0Y3Z8 333 aa13.61□□□□□ -0.23
BDNF-202ENST00000356660 TDP2O95551 362 aa13.61□□□□□ -0.23
BDNF-202ENST00000356660 BTDP43251 543 aa13.61□□□□□ -0.23
BDNF-202ENST00000356660 UBE2SQ16763 222 aa13.61□□□□□ -0.23
BDNF-202ENST00000356660 NAALADL2Q58DX5 795 aa13.61□□□□□ -0.23
BDNF-202ENST00000356660 GUF1Q8N442 669 aaKnown RBP13.61□□□□□ -0.23
BDNF-202ENST00000356660 ARMC2Q8NEN0 867 aa13.61□□□□□ -0.23
BDNF-202ENST00000356660 XPO6Q96QU8 1125 aaKnown RBP13.61□□□□□ -0.23
BDNF-202ENST00000356660 PRMT1Q99873 361 aaKnown RBP13.61□□□□□ -0.23
BDNF-202ENST00000356660 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.61□□□□□ -0.23
BDNF-202ENST00000356660 SSU72P8A0A1W2PR75 194 aa13.61□□□□□ -0.23
BDNF-202ENST00000356660 GRID2IPA4D2P6 1211 aa13.61□□□□□ -0.23
BDNF-202ENST00000356660 RASGRF2O14827 1237 aa13.61□□□□□ -0.23
BDNF-202ENST00000356660 PRPHP41219 470 aa13.61□□□□□ -0.23
BDNF-202ENST00000356660 IRX1P78414 480 aaPredicted RBP13.61□□□□□ -0.23
BDNF-202ENST00000356660 PSMD2Q13200 908 aa13.61□□□□□ -0.23
BDNF-202ENST00000356660 DRP2Q13474 957 aa13.61□□□□□ -0.23
BDNF-202ENST00000356660 IQCKQ8N0W5 287 aa13.61□□□□□ -0.23
BDNF-202ENST00000356660 ISCUQ9H1K1 167 aa13.61□□□□□ -0.23
BDNF-202ENST00000356660 ATP8A2Q9NTI2 1148 aa13.61□□□□□ -0.23
BDNF-202ENST00000356660 A0A1W2PQJ5 194 aa13.61□□□□□ -0.23
BDNF-202ENST00000356660 E9PMD0 336 aa13.61□□□□□ -0.23
BDNF-202ENST00000356660 GNA14O95837 355 aa13.61□□□□□ -0.23
BDNF-202ENST00000356660 ITGA4P13612 1032 aa13.61□□□□□ -0.23
BDNF-202ENST00000356660 MESDQ14696 234 aa13.61□□□□□ -0.23
BDNF-202ENST00000356660 NAB2Q15742 525 aa13.61□□□□□ -0.23
BDNF-202ENST00000356660 RUBCNQ92622 972 aa13.61□□□□□ -0.23
BDNF-202ENST00000356660 STAMBPL1Q96FJ0 436 aa13.61□□□□□ -0.23
BDNF-202ENST00000356660 BRIP1Q9BX63 1249 aa13.61□□□□□ -0.23
BDNF-202ENST00000356660 ZBTB16Q05516 673 aa13.61□□□□□ -0.23
BDNF-202ENST00000356660 QPCTQ16769 361 aa13.61□□□□□ -0.23
BDNF-202ENST00000356660 GALNT17Q6IS24 598 aa13.61□□□□□ -0.23
BDNF-202ENST00000356660 SPICE1Q8N0Z3 855 aa13.61□□□□□ -0.23
BDNF-202ENST00000356660 ARHGEF2Q92974 986 aaKnown RBP13.61□□□□□ -0.23
BDNF-202ENST00000356660 ZNF512BQ96KM6 892 aaPredicted RBP13.61□□□□□ -0.23
BDNF-202ENST00000356660 RIMBP3CA6NJZ7 1639 aa13.6□□□□□ -0.23
BDNF-202ENST00000356660 RIMBP3BA6NNM3 1639 aa13.6□□□□□ -0.23
BDNF-202ENST00000356660 RIMBP3Q9UFD9 1639 aa13.6□□□□□ -0.23
BDNF-202ENST00000356660 CCT8L1PA6NM43 557 aa13.6□□□□□ -0.23
BDNF-202ENST00000356660 CCDC188H7C350 402 aa13.6□□□□□ -0.23
BDNF-202ENST00000356660 ANKRD20A8PQ5CZ79 823 aa13.6□□□□□ -0.23
BDNF-202ENST00000356660 FAM47EQ6ZV65 393 aa13.6□□□□□ -0.23
BDNF-202ENST00000356660 LMNTD2Q8IXW0 634 aa13.6□□□□□ -0.23
BDNF-202ENST00000356660 UBL4BQ8N7F7 174 aa13.6□□□□□ -0.23
BDNF-202ENST00000356660 KIAA0895Q8NCT3 520 aa13.6□□□□□ -0.23
BDNF-202ENST00000356660 PLA2G12BQ9BX93 195 aa13.6□□□□□ -0.23
BDNF-202ENST00000356660 STK17AQ9UEE5 414 aa13.6□□□□□ -0.23
BDNF-202ENST00000356660 DDX25Q9UHL0 483 aaKnown RBP13.6□□□□□ -0.23
BDNF-202ENST00000356660 PCP11498 1178 aaKnown RBP13.6□□□□□ -0.23
BDNF-202ENST00000356660 SLC9A1P19634 815 aa13.6□□□□□ -0.23
BDNF-202ENST00000356660 SLC16A2P36021 539 aa13.6□□□□□ -0.23
BDNF-202ENST00000356660 CYP2J2P51589 502 aa13.6□□□□□ -0.23
BDNF-202ENST00000356660 ZNF131P52739 623 aa13.6□□□□□ -0.23
BDNF-202ENST00000356660 SNX1Q13596 522 aa13.6□□□□□ -0.23
BDNF-202ENST00000356660 ZRSR2Q15696 482 aaKnown RBP13.6□□□□□ -0.23
BDNF-202ENST00000356660 GSTA5Q7RTV2 222 aa13.6□□□□□ -0.23
BDNF-202ENST00000356660 METTL13Q8N6R0 699 aa13.6□□□□□ -0.23
BDNF-202ENST00000356660 GLG1Q92896 1179 aa13.6□□□□□ -0.23
BDNF-202ENST00000356660 CCDC77Q9BR77 488 aa13.6□□□□□ -0.23
BDNF-202ENST00000356660 DBR1Q9UK59 544 aaKnown RBP13.6□□□□□ -0.23
BDNF-202ENST00000356660 ABCC6O95255 1503 aa13.6□□□□□ -0.23
BDNF-202ENST00000356660 PDHA1P08559 390 aa13.6□□□□□ -0.23
BDNF-202ENST00000356660 FGFR4P22455 802 aa13.6□□□□□ -0.23
BDNF-202ENST00000356660 MXRA7P84157 204 aa13.6□□□□□ -0.23
BDNF-202ENST00000356660 PTK2Q05397 1052 aa13.6□□□□□ -0.23
BDNF-202ENST00000356660 COASYQ13057 564 aa13.6□□□□□ -0.23
BDNF-202ENST00000356660 NBPF20Q3BBV1 942 aa13.6□□□□□ -0.23
BDNF-202ENST00000356660 NSMFQ6X4W1 530 aa13.6□□□□□ -0.23
BDNF-202ENST00000356660 C7orf25Q9BPX7 421 aa13.6□□□□□ -0.23
BDNF-202ENST00000356660 TMOD4Q9NZQ9 345 aa13.6□□□□□ -0.23
BDNF-202ENST00000356660 GCNT4Q9P109 453 aa13.6□□□□□ -0.23
BDNF-202ENST00000356660 GJA3Q9Y6H8 435 aa13.6□□□□□ -0.23
BDNF-202ENST00000356660 SPATA31A3Q5VYP0 1347 aa13.59□□□□□ -0.23
BDNF-202ENST00000356660 NPHP3-ACAD11A0A0J9YXS1 232 aa13.59□□□□□ -0.23
BDNF-202ENST00000356660 WTIPA6NIX2 430 aaPredicted RBP13.59□□□□□ -0.23
BDNF-202ENST00000356660 KIF3CO14782 793 aa13.59□□□□□ -0.23
BDNF-202ENST00000356660 ADAMTS3O15072 1205 aa13.59□□□□□ -0.23
BDNF-202ENST00000356660 KCNQ2O43526 872 aa13.59□□□□□ -0.23
BDNF-202ENST00000356660 KLRC4O43908 158 aa13.59□□□□□ -0.23
BDNF-202ENST00000356660 CAND2O75155 1236 aa13.59□□□□□ -0.23
BDNF-202ENST00000356660 MYBL1P10243 752 aa13.59□□□□□ -0.23
BDNF-202ENST00000356660 PLCB3Q01970 1234 aa13.59□□□□□ -0.23
BDNF-202ENST00000356660 ZNF844Q08AG5 666 aa13.59□□□□□ -0.23
BDNF-202ENST00000356660 ITGB3BPQ13352 177 aaPredicted RBP13.59□□□□□ -0.23
BDNF-202ENST00000356660 TRIP13Q15645 432 aaPredicted RBP13.59□□□□□ -0.23
BDNF-202ENST00000356660 GNPTABQ3T906 1256 aa13.59□□□□□ -0.23
BDNF-202ENST00000356660 CAPRIN2Q6IMN6 1127 aaKnown RBP13.59□□□□□ -0.23
BDNF-202ENST00000356660 GLIS3Q8NEA6 775 aa13.59□□□□□ -0.23
BDNF-202ENST00000356660 JDP2Q8WYK2 163 aa13.59□□□□□ -0.23
BDNF-202ENST00000356660 MIEF2Q96C03 454 aa13.59□□□□□ -0.23
BDNF-202ENST00000356660 SAAL1Q96ER3 474 aa13.59□□□□□ -0.23
BDNF-202ENST00000356660 TMEM47Q9BQJ4 181 aa13.59□□□□□ -0.23
BDNF-202ENST00000356660 CHD2O14647 1828 aaKnown RBP13.59□□□□□ -0.23
BDNF-202ENST00000356660 AKAP12Q02952 1782 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms