RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 ZFYVE27Q5T4F4 411 aa14.81□□□□□ -0.04
TRIM4-203ENST00000355947 UBAP2Q5T6F2 1119 aaKnown RBP14.81□□□□□ -0.04
TRIM4-203ENST00000355947 KCTD1Q719H9 257 aa14.81□□□□□ -0.04
TRIM4-203ENST00000355947 NBPF5PQ86XG9 351 aaPredicted RBP14.81□□□□□ -0.04
TRIM4-203ENST00000355947 CUEDC2Q9H467 287 aa14.81□□□□□ -0.04
TRIM4-203ENST00000355947 RTCBQ9Y3I0 505 aaKnown RBP14.81□□□□□ -0.04
TRIM4-203ENST00000355947 ECM29Q5VYK3 1845 aa14.81□□□□□ -0.04
TRIM4-203ENST00000355947 SSU72P8A0A1W2PR75 194 aa14.81□□□□□ -0.04
TRIM4-203ENST00000355947 DIAPH2O60879 1101 aa14.81□□□□□ -0.04
TRIM4-203ENST00000355947 FLOT1O75955 427 aa14.81□□□□□ -0.04
TRIM4-203ENST00000355947 HSPA9P38646 679 aaKnown RBP14.81□□□□□ -0.04
TRIM4-203ENST00000355947 KCNJ1P48048 391 aa14.81□□□□□ -0.04
TRIM4-203ENST00000355947 GSCP56915 257 aaPredicted RBP14.81□□□□□ -0.04
TRIM4-203ENST00000355947 RPS8P62241 208 aaKnown RBP14.81□□□□□ -0.04
TRIM4-203ENST00000355947 CDK17Q00537 523 aa14.81□□□□□ -0.04
TRIM4-203ENST00000355947 SNX1Q13596 522 aa14.81□□□□□ -0.04
TRIM4-203ENST00000355947 PPP4R3AQ6IN85 833 aa14.81□□□□□ -0.04
TRIM4-203ENST00000355947 EPS8L3Q8TE67 593 aaKnown RBP14.81□□□□□ -0.04
TRIM4-203ENST00000355947 XPO6Q96QU8 1125 aaKnown RBP14.81□□□□□ -0.04
TRIM4-203ENST00000355947 THRAP3Q9Y2W1 955 aaKnown RBP14.81□□□□□ -0.04
TRIM4-203ENST00000355947 XRCC5P13010 732 aaKnown RBP14.81□□□□□ -0.04
TRIM4-203ENST00000355947 GJC1P36383 396 aa14.81□□□□□ -0.04
TRIM4-203ENST00000355947 TNIP1Q15025 636 aa14.81□□□□□ -0.04
TRIM4-203ENST00000355947 TTBK2Q6IQ55 1244 aa14.81□□□□□ -0.04
TRIM4-203ENST00000355947 SPDL1Q96EA4 605 aa14.81□□□□□ -0.04
TRIM4-203ENST00000355947 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.81□□□□□ -0.042e-6■■■■□ 19.8
TRIM4-203ENST00000355947 MTFR1LQ9H019 292 aa14.81□□□□□ -0.04
TRIM4-203ENST00000355947 ACTR5Q9H9F9 607 aaPredicted RBP14.81□□□□□ -0.04
TRIM4-203ENST00000355947 PLCB1Q9NQ66 1216 aa14.81□□□□□ -0.04
TRIM4-203ENST00000355947 GCNT4Q9P109 453 aa14.81□□□□□ -0.04
TRIM4-203ENST00000355947 DAAM1Q9Y4D1 1078 aa14.81□□□□□ -0.04
TRIM4-203ENST00000355947 PLCG2P16885 1265 aa14.8□□□□□ -0.04
TRIM4-203ENST00000355947 CASP4P49662 377 aa14.8□□□□□ -0.04
TRIM4-203ENST00000355947 ERFP50548 548 aa14.8□□□□□ -0.04
TRIM4-203ENST00000355947 CYP2J2P51589 502 aa14.8□□□□□ -0.04
TRIM4-203ENST00000355947 UBE4AQ14139 1066 aa14.8□□□□□ -0.04
TRIM4-203ENST00000355947 SLC29A2Q14542 456 aa14.8□□□□□ -0.04
TRIM4-203ENST00000355947 LRCH2Q5VUJ6 765 aa14.8□□□□□ -0.04
TRIM4-203ENST00000355947 ABCF3Q9NUQ8 709 aa14.8□□□□□ -0.04
TRIM4-203ENST00000355947 A8MUI8 341 aa14.8□□□□□ -0.04
TRIM4-203ENST00000355947 PLA2G4BP0C869 781 aa14.8□□□□□ -0.04
TRIM4-203ENST00000355947 CASP5P51878 434 aa14.8□□□□□ -0.04
TRIM4-203ENST00000355947 DR1Q01658 176 aa14.8□□□□□ -0.04
TRIM4-203ENST00000355947 IFI16Q16666 785 aaKnown RBP14.8□□□□□ -0.04
TRIM4-203ENST00000355947 SEPT14Q6ZU15 432 aa14.8□□□□□ -0.04
TRIM4-203ENST00000355947 DGKHQ86XP1 1220 aa14.8□□□□□ -0.04
TRIM4-203ENST00000355947 ZMYND12Q9H0C1 365 aa14.8□□□□□ -0.04
TRIM4-203ENST00000355947 RNF14Q9UBS8 474 aa14.8□□□□□ -0.04
TRIM4-203ENST00000355947 TRIM33Q9UPN9 1127 aa14.8□□□□□ -0.04
TRIM4-203ENST00000355947 GOLGA6L10A0A0M3HER8 536 aa14.79□□□□□ -0.04
TRIM4-203ENST00000355947 UCHL3P15374 230 aa14.79□□□□□ -0.04
TRIM4-203ENST00000355947 PREPLQ4J6C6 727 aaPredicted RBP14.79□□□□□ -0.04
TRIM4-203ENST00000355947 C12orf60Q5U649 245 aa14.79□□□□□ -0.04
TRIM4-203ENST00000355947 FAM47EQ6ZV65 393 aa14.79□□□□□ -0.04
TRIM4-203ENST00000355947 CCDC105Q8IYK2 499 aa14.79□□□□□ -0.04
TRIM4-203ENST00000355947 FBXO25Q8TCJ0 367 aa14.79□□□□□ -0.04
TRIM4-203ENST00000355947 CTTNBP2NLQ9P2B4 639 aa14.79□□□□□ -0.04
TRIM4-203ENST00000355947 NAGPAQ9UK23 515 aa14.79□□□□□ -0.04
TRIM4-203ENST00000355947 SPEF2Q9C093 1822 aa14.79□□□□□ -0.04
TRIM4-203ENST00000355947 RASSF9O75901 435 aa14.79□□□□□ -0.04
TRIM4-203ENST00000355947 BAG3O95817 575 aa14.79□□□□□ -0.04
TRIM4-203ENST00000355947 PPP1R2P41236 205 aa14.79□□□□□ -0.04
TRIM4-203ENST00000355947 KCNJ2P63252 427 aa14.79□□□□□ -0.04
TRIM4-203ENST00000355947 MTMR3Q13615 1198 aa14.79□□□□□ -0.04
TRIM4-203ENST00000355947 CUL1Q13616 776 aa14.79□□□□□ -0.04
TRIM4-203ENST00000355947 USH1GQ495M9 461 aa14.79□□□□□ -0.04
TRIM4-203ENST00000355947 NUGGCQ68CJ6 796 aa14.79□□□□□ -0.04
TRIM4-203ENST00000355947 FAM228AQ86W67 206 aa14.79□□□□□ -0.04
TRIM4-203ENST00000355947 SLC17A8Q8NDX2 589 aa14.79□□□□□ -0.04
TRIM4-203ENST00000355947 ELMO3Q96BJ8 720 aa14.79□□□□□ -0.04
TRIM4-203ENST00000355947 MIEF2Q96C03 454 aa14.79□□□□□ -0.04
TRIM4-203ENST00000355947 TRIM6Q9C030 488 aaPredicted RBP14.79□□□□□ -0.04
TRIM4-203ENST00000355947 YIPF3Q9GZM5 350 aa14.79□□□□□ -0.04
TRIM4-203ENST00000355947 SRP68Q9UHB9 627 aaKnown RBP14.79□□□□□ -0.04
TRIM4-203ENST00000355947 MCM8Q9UJA3 840 aa14.79□□□□□ -0.04
TRIM4-203ENST00000355947 H0Y3Z8 333 aa14.79□□□□□ -0.04
TRIM4-203ENST00000355947 LAD1O00515 517 aa14.79□□□□□ -0.04
TRIM4-203ENST00000355947 USP11P51784 963 aa14.79□□□□□ -0.04
TRIM4-203ENST00000355947 GALCP54803 685 aa14.79□□□□□ -0.04
TRIM4-203ENST00000355947 ITIH3Q06033 890 aa14.79□□□□□ -0.04
TRIM4-203ENST00000355947 KCNA1Q09470 495 aa14.79□□□□□ -0.04
TRIM4-203ENST00000355947 MESDQ14696 234 aa14.79□□□□□ -0.04
TRIM4-203ENST00000355947 ZNF662Q6ZS27 426 aa14.79□□□□□ -0.04
TRIM4-203ENST00000355947 RPGRQ92834 1020 aaKnown RBP14.79□□□□□ -0.04
TRIM4-203ENST00000355947 KLHL29Q96CT2 875 aa14.79□□□□□ -0.04
TRIM4-203ENST00000355947 FGFR1OP2Q9NVK5 253 aa14.79□□□□□ -0.04
TRIM4-203ENST00000355947 RSPH10B2B2RC85 870 aa14.78□□□□□ -0.04
TRIM4-203ENST00000355947 PJA2O43164 708 aa14.78□□□□□ -0.04
TRIM4-203ENST00000355947 RSPH10BP0C881 870 aa14.78□□□□□ -0.04
TRIM4-203ENST00000355947 TRIM49P0CI25 452 aa14.78□□□□□ -0.04
TRIM4-203ENST00000355947 TRIM49CP0CI26 452 aa14.78□□□□□ -0.04
TRIM4-203ENST00000355947 CDK8P49336 464 aa14.78□□□□□ -0.04
TRIM4-203ENST00000355947 LONRF1Q17RB8 773 aa14.78□□□□□ -0.04
TRIM4-203ENST00000355947 PRR16Q569H4 304 aa14.78□□□□□ -0.04
TRIM4-203ENST00000355947 BRINP3Q76B58 766 aa14.78□□□□□ -0.04
TRIM4-203ENST00000355947 TMC3Q7Z5M5 1100 aa14.78□□□□□ -0.04
TRIM4-203ENST00000355947 SFR1Q86XK3 245 aa14.78□□□□□ -0.04
TRIM4-203ENST00000355947 SEMA4AQ9H3S1 761 aa14.78□□□□□ -0.04
TRIM4-203ENST00000355947 GSTTP1A0A1W2PQM5 241 aa14.78□□□□□ -0.04
TRIM4-203ENST00000355947 ERVV-1B6SEH8 477 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms