RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 ERVK-9P63128 1117 aa25.29■■□□□ 1.64
SCAMP3-202ENST00000355379 ERVK-24P63145 666 aa25.29■■□□□ 1.64
SCAMP3-202ENST00000355379 BMT2Q1RMZ1 405 aa25.29■■□□□ 1.64
SCAMP3-202ENST00000355379 FGFBP2Q9BYJ0 223 aa25.29■■□□□ 1.64
SCAMP3-202ENST00000355379 KCTD10Q9H3F6 313 aa25.29■■□□□ 1.64
SCAMP3-202ENST00000355379 DNAJC25-GNG10A0A024R161 153 aa25.28■■□□□ 1.64
SCAMP3-202ENST00000355379 CCL15-CCL14A0A0B4J2E2 113 aa25.28■■□□□ 1.64
SCAMP3-202ENST00000355379 LOC102724159A0A0B4J2E5 919 aa25.28■■□□□ 1.64
SCAMP3-202ENST00000355379 LGALS16A8MUM7 142 aa25.28■■□□□ 1.64
SCAMP3-202ENST00000355379 NRDCO43847 1150 aa25.28■■□□□ 1.64
SCAMP3-202ENST00000355379 TPM2P07951 284 aa25.28■■□□□ 1.64
SCAMP3-202ENST00000355379 PWP2Q15269 919 aaKnown RBP25.28■■□□□ 1.64
SCAMP3-202ENST00000355379 CCL15Q16663 113 aa25.28■■□□□ 1.64
SCAMP3-202ENST00000355379 ZNF507Q8TCN5 953 aa25.28■■□□□ 1.64
SCAMP3-202ENST00000355379 MMP19Q99542 508 aa25.28■■□□□ 1.64
SCAMP3-202ENST00000355379 TIPINQ9BVW5 301 aa25.28■■□□□ 1.64
SCAMP3-202ENST00000355379 PARVGQ9HBI0 331 aa25.28■■□□□ 1.64
SCAMP3-202ENST00000355379 JPH1Q9HDC5 661 aaPredicted RBP25.28■■□□□ 1.64
SCAMP3-202ENST00000355379 SLC9A2Q9UBY0 812 aa25.28■■□□□ 1.64
SCAMP3-202ENST00000355379 PDHXO00330 501 aa25.27■■□□□ 1.64
SCAMP3-202ENST00000355379 RARRES1P49788 294 aa25.27■■□□□ 1.64
SCAMP3-202ENST00000355379 FKBP3Q00688 224 aaKnown RBP25.27■■□□□ 1.64
SCAMP3-202ENST00000355379 KCTD2Q14681 263 aa25.27■■□□□ 1.64
SCAMP3-202ENST00000355379 SPRYD7Q5W111 196 aa25.27■■□□□ 1.64
SCAMP3-202ENST00000355379 PADI6Q6TGC4 694 aa25.27■■□□□ 1.64
SCAMP3-202ENST00000355379 LRRC55Q6ZSA7 311 aa25.27■■□□□ 1.64
SCAMP3-202ENST00000355379 ZC3H3Q8IXZ2 948 aaKnown RBP25.27■■□□□ 1.64
SCAMP3-202ENST00000355379 CCDC112Q8NEF3 446 aa25.27■■□□□ 1.64
SCAMP3-202ENST00000355379 CEP63Q96MT8 703 aa25.27■■□□□ 1.64
SCAMP3-202ENST00000355379 TUBGCP2Q9BSJ2 902 aa25.27■■□□□ 1.64
SCAMP3-202ENST00000355379 SPTLC3Q9NUV7 552 aa25.27■■□□□ 1.64
SCAMP3-202ENST00000355379 EIF3DO15371 548 aaKnown RBP eCLIP25.27■■□□□ 1.64
SCAMP3-202ENST00000355379 PSAPP07602 524 aa25.27■■□□□ 1.64
SCAMP3-202ENST00000355379 SKILP12757 684 aa25.27■■□□□ 1.64
SCAMP3-202ENST00000355379 YWHABP31946 246 aaKnown RBP25.27■■□□□ 1.64
SCAMP3-202ENST00000355379 EDRF1Q3B7T1 1238 aa25.27■■□□□ 1.64
SCAMP3-202ENST00000355379 BRI3BPQ8WY22 251 aa25.27■■□□□ 1.64
SCAMP3-202ENST00000355379 ARID2Q68CP9 1835 aa25.26■■□□□ 1.63
SCAMP3-202ENST00000355379 UBE4BO95155 1302 aa25.26■■□□□ 1.63
SCAMP3-202ENST00000355379 A0A1W2PQC6 194 aa25.26■■□□□ 1.63
SCAMP3-202ENST00000355379 BTBD19C9JJ37 291 aa25.26■■□□□ 1.63
SCAMP3-202ENST00000355379 MTIF2P46199 727 aaKnown RBP25.26■■□□□ 1.63
SCAMP3-202ENST00000355379 GCLCP48506 637 aaPredicted RBP25.26■■□□□ 1.63
SCAMP3-202ENST00000355379 DNM2P50570 870 aa25.26■■□□□ 1.63
SCAMP3-202ENST00000355379 FSTL1Q12841 308 aa25.26■■□□□ 1.63
SCAMP3-202ENST00000355379 NOLC1Q14978 699 aaKnown RBP eCLIP25.26■■□□□ 1.63
SCAMP3-202ENST00000355379 UGCGQ16739 394 aa25.26■■□□□ 1.63
SCAMP3-202ENST00000355379 CREBRFQ8IUR6 639 aa25.26■■□□□ 1.63
SCAMP3-202ENST00000355379 ATP6V0A1Q93050 837 aa25.26■■□□□ 1.63
SCAMP3-202ENST00000355379 MRPL44Q9H9J2 332 aaKnown RBP25.26■■□□□ 1.63
SCAMP3-202ENST00000355379 TRAF3IP3Q9Y228 551 aa25.26■■□□□ 1.63
SCAMP3-202ENST00000355379 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.26■■□□□ 1.63
SCAMP3-202ENST00000355379 TGFB3P10600 412 aa25.25■■□□□ 1.63
SCAMP3-202ENST00000355379 KCNJ6P48051 423 aa25.25■■□□□ 1.63
SCAMP3-202ENST00000355379 CASP5P51878 434 aa25.25■■□□□ 1.63
SCAMP3-202ENST00000355379 CCNA1P78396 465 aa25.25■■□□□ 1.63
SCAMP3-202ENST00000355379 TRIM14Q14142 442 aa25.25■■□□□ 1.63
SCAMP3-202ENST00000355379 PTPN21Q16825 1174 aa25.25■■□□□ 1.63
SCAMP3-202ENST00000355379 KNOP1Q1ED39 458 aaKnown RBP25.25■■□□□ 1.63
SCAMP3-202ENST00000355379 ABHD15Q6UXT9 468 aa25.25■■□□□ 1.63
SCAMP3-202ENST00000355379 MYCT1Q8N699 235 aa25.25■■□□□ 1.63
SCAMP3-202ENST00000355379 GPRC5AQ8NFJ5 357 aa25.25■■□□□ 1.63
SCAMP3-202ENST00000355379 TMX1Q9H3N1 280 aa25.25■■□□□ 1.63
SCAMP3-202ENST00000355379 PDXKO00764 312 aa25.24■■□□□ 1.63
SCAMP3-202ENST00000355379 ATG7O95352 703 aa25.24■■□□□ 1.63
SCAMP3-202ENST00000355379 GNA14O95837 355 aa25.24■■□□□ 1.63
SCAMP3-202ENST00000355379 CYP2C8P10632 490 aa25.24■■□□□ 1.63
SCAMP3-202ENST00000355379 MAPTP10636 758 aaKnown RBP25.24■■□□□ 1.63
SCAMP3-202ENST00000355379 ACTR2P61160 394 aa25.24■■□□□ 1.63
SCAMP3-202ENST00000355379 UBXN1Q04323 297 aa25.24■■□□□ 1.63
SCAMP3-202ENST00000355379 MIS18BP1Q6P0N0 1132 aa25.24■■□□□ 1.63
SCAMP3-202ENST00000355379 STXBP4Q6ZWJ1 553 aa25.24■■□□□ 1.63
SCAMP3-202ENST00000355379 PPFIBP1Q86W92 1011 aa25.24■■□□□ 1.63
SCAMP3-202ENST00000355379 NELFCDQ8IXH7 590 aa25.24■■□□□ 1.63
SCAMP3-202ENST00000355379 FGD4Q96M96 766 aa25.24■■□□□ 1.63
SCAMP3-202ENST00000355379 R3HDMLQ9H3Y0 253 aa25.24■■□□□ 1.63
SCAMP3-202ENST00000355379 NMRK2Q9NPI5 230 aa25.24■■□□□ 1.63
SCAMP3-202ENST00000355379 MORF4L1Q9UBU8 362 aa25.24■■□□□ 1.63
SCAMP3-202ENST00000355379 PLXNB2O15031 1838 aa25.24■■□□□ 1.63
SCAMP3-202ENST00000355379 MYH9P35579 1960 aaKnown RBP25.23■■□□□ 1.63
SCAMP3-202ENST00000355379 ITGBL1O95965 494 aaPredicted RBP25.23■■□□□ 1.63
SCAMP3-202ENST00000355379 MYBP10242 640 aa25.23■■□□□ 1.63
SCAMP3-202ENST00000355379 MAPK7Q13164 816 aa25.23■■□□□ 1.63
SCAMP3-202ENST00000355379 OTUD6AQ7L8S5 288 aa25.23■■□□□ 1.63
SCAMP3-202ENST00000355379 TC2NQ8N9U0 490 aa25.23■■□□□ 1.63
SCAMP3-202ENST00000355379 MORC4Q8TE76 937 aa25.23■■□□□ 1.63
SCAMP3-202ENST00000355379 SMCR8Q8TEV9 937 aaPredicted RBP25.23■■□□□ 1.63
SCAMP3-202ENST00000355379 GABBR1Q9UBS5 961 aa25.23■■□□□ 1.63
SCAMP3-202ENST00000355379 AKR1B15C9JRZ8 316 aaPredicted RBP25.22■■□□□ 1.63
SCAMP3-202ENST00000355379 HIP1RO75146 1068 aa25.22■■□□□ 1.63
SCAMP3-202ENST00000355379 GCNT3O95395 438 aa25.22■■□□□ 1.63
SCAMP3-202ENST00000355379 PRKCSHP14314 528 aaPredicted RBP25.22■■□□□ 1.63
SCAMP3-202ENST00000355379 HOXD13P35453 343 aa25.22■■□□□ 1.63
SCAMP3-202ENST00000355379 MARSP56192 900 aaKnown RBP25.22■■□□□ 1.63
SCAMP3-202ENST00000355379 SP2Q02086 613 aa25.22■■□□□ 1.63
SCAMP3-202ENST00000355379 CST9Q5W186 159 aa25.22■■□□□ 1.63
SCAMP3-202ENST00000355379 CHADLQ6NUI6 762 aa25.22■■□□□ 1.63
SCAMP3-202ENST00000355379 KCNV1Q6PIU1 500 aa25.22■■□□□ 1.63
SCAMP3-202ENST00000355379 SEPT14Q6ZU15 432 aa25.22■■□□□ 1.63
SCAMP3-202ENST00000355379 CCDC43Q96MW1 224 aaKnown RBP25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms