RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 FTOQ9C0B1 505 aaKnown RBP eCLIP11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 NOD2Q9HC29 1040 aa11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.94□□□□□ -0.53e-7■■■□□ 16.6
SMARCE1-202ENST00000348513 AFG3L2Q9Y4W6 797 aa11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 COL4A3BPQ9Y5P4 624 aa11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 FAM26FQ5R3K3 315 aa11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 CYB5D1Q6P9G0 228 aa11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 APOA5Q6Q788 366 aa11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 RFWD2Q8NHY2 731 aa11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 NRBP2Q9NSY0 501 aa11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 DLGAP2Q9P1A6 1054 aa11.94□□□□□ -0.5
SMARCE1-202ENST00000348513 TUBA1BP68363 451 aa11.93□□□□□ -0.5
SMARCE1-202ENST00000348513 UBE2SQ16763 222 aa11.93□□□□□ -0.5
SMARCE1-202ENST00000348513 PREPLQ4J6C6 727 aaPredicted RBP11.93□□□□□ -0.5
SMARCE1-202ENST00000348513 TUBA1AQ71U36 451 aa11.93□□□□□ -0.5
SMARCE1-202ENST00000348513 CTAGE3PQ8IX95 158 aa11.93□□□□□ -0.5
SMARCE1-202ENST00000348513 KIRREL3Q8IZU9 778 aa11.93□□□□□ -0.5
SMARCE1-202ENST00000348513 MAML3Q96JK9 1138 aa11.93□□□□□ -0.5
SMARCE1-202ENST00000348513 RAB20Q9NX57 234 aa11.93□□□□□ -0.5
SMARCE1-202ENST00000348513 IL1RAPL1Q9NZN1 696 aa11.93□□□□□ -0.5
SMARCE1-202ENST00000348513 PCDHA4Q9UN74 947 aa11.93□□□□□ -0.5
SMARCE1-202ENST00000348513 KDM5DQ9BY66 1539 aa11.93□□□□□ -0.5
SMARCE1-202ENST00000348513 I3L4J1 428 aa11.93□□□□□ -0.5
SMARCE1-202ENST00000348513 DAB1O75553 588 aa11.93□□□□□ -0.5
SMARCE1-202ENST00000348513 CDC25AP30304 524 aa11.93□□□□□ -0.5
SMARCE1-202ENST00000348513 KIF11P52732 1056 aa11.93□□□□□ -0.5
SMARCE1-202ENST00000348513 FAM160B1Q5W0V3 765 aa11.93□□□□□ -0.5
SMARCE1-202ENST00000348513 TRIM50Q86XT4 487 aa11.93□□□□□ -0.5
SMARCE1-202ENST00000348513 OR8K1Q8NGG5 319 aa11.93□□□□□ -0.5
SMARCE1-202ENST00000348513 OSBP2Q969R2 916 aa11.93□□□□□ -0.5
SMARCE1-202ENST00000348513 GIPC1O14908 333 aa11.93□□□□□ -0.5
SMARCE1-202ENST00000348513 CACNB3P54284 484 aa11.93□□□□□ -0.5
SMARCE1-202ENST00000348513 AATKQ6ZMQ8 1374 aa11.93□□□□□ -0.5
SMARCE1-202ENST00000348513 FMNL1O95466 1100 aaPredicted RBP11.93□□□□□ -0.5
SMARCE1-202ENST00000348513 HSPA9P38646 679 aaKnown RBP11.93□□□□□ -0.5
SMARCE1-202ENST00000348513 PDXDC1Q6P996 788 aa11.93□□□□□ -0.5
SMARCE1-202ENST00000348513 KRT26Q7Z3Y9 468 aa11.93□□□□□ -0.5
SMARCE1-202ENST00000348513 SCYL3Q8IZE3 742 aa11.93□□□□□ -0.5
SMARCE1-202ENST00000348513 PCIF1Q9H4Z3 704 aa11.93□□□□□ -0.5
SMARCE1-202ENST00000348513 VCPKMTQ9H867 229 aa11.93□□□□□ -0.5
SMARCE1-202ENST00000348513 PIH1D3Q9NQM4 214 aaKnown RBP11.93□□□□□ -0.5
SMARCE1-202ENST00000348513 DISC1Q9NRI5 854 aa11.93□□□□□ -0.5
SMARCE1-202ENST00000348513 GID8Q9NWU2 228 aa11.93□□□□□ -0.5
SMARCE1-202ENST00000348513 CARMIL3Q8ND23 1372 aa11.93□□□□□ -0.5
SMARCE1-202ENST00000348513 KDM6BO15054 1643 aa11.93□□□□□ -0.5
SMARCE1-202ENST00000348513 GMNCA6NCL1 334 aa11.92□□□□□ -0.5
SMARCE1-202ENST00000348513 STX3Q13277 289 aa11.92□□□□□ -0.5
SMARCE1-202ENST00000348513 HLFQ16534 295 aa11.92□□□□□ -0.5
SMARCE1-202ENST00000348513 CCDC144BQ3MJ40 725 aa11.92□□□□□ -0.5
SMARCE1-202ENST00000348513 GALNT17Q6IS24 598 aa11.92□□□□□ -0.5
SMARCE1-202ENST00000348513 ANKRD13CQ8N6S4 541 aa11.92□□□□□ -0.5
SMARCE1-202ENST00000348513 SCHIP1Q9P0W5 487 aaPredicted RBP11.92□□□□□ -0.5
SMARCE1-202ENST00000348513 CD2APQ9Y5K6 639 aa11.92□□□□□ -0.5
SMARCE1-202ENST00000348513 HEG1Q9ULI3 1381 aa11.92□□□□□ -0.5
SMARCE1-202ENST00000348513 SAMD9LQ8IVG5 1584 aa11.92□□□□□ -0.5
SMARCE1-202ENST00000348513 ATP10DQ9P241 1426 aa11.92□□□□□ -0.5
SMARCE1-202ENST00000348513 HNRNPDLO14979 420 aaKnown RBP11.92□□□□□ -0.5
SMARCE1-202ENST00000348513 CTNND1O60716 968 aaKnown RBP11.92□□□□□ -0.5
SMARCE1-202ENST00000348513 SPAG7O75391 227 aa11.92□□□□□ -0.5
SMARCE1-202ENST00000348513 KRT38O76015 456 aa11.92□□□□□ -0.5
SMARCE1-202ENST00000348513 DDHD2O94830 711 aa11.92□□□□□ -0.5
SMARCE1-202ENST00000348513 TMOD1P28289 359 aa11.92□□□□□ -0.5
SMARCE1-202ENST00000348513 ASPRV1Q53RT3 343 aa11.92□□□□□ -0.5
SMARCE1-202ENST00000348513 TBCKQ8TEA7 893 aa11.92□□□□□ -0.5
SMARCE1-202ENST00000348513 ZNF473Q8WTR7 871 aaKnown RBP11.92□□□□□ -0.5
SMARCE1-202ENST00000348513 EPN3Q9H201 632 aa11.92□□□□□ -0.5
SMARCE1-202ENST00000348513 H0Y3Z8 333 aa11.92□□□□□ -0.5
SMARCE1-202ENST00000348513 IMPDH2P12268 514 aa11.92□□□□□ -0.5
SMARCE1-202ENST00000348513 NR5A1Q13285 461 aa11.92□□□□□ -0.5
SMARCE1-202ENST00000348513 KCNB1Q14721 858 aa11.92□□□□□ -0.5
SMARCE1-202ENST00000348513 UHMK1Q8TAS1 419 aaKnown RBP11.92□□□□□ -0.5
SMARCE1-202ENST00000348513 EZH1Q92800 747 aaPredicted RBP11.92□□□□□ -0.5
SMARCE1-202ENST00000348513 MOV10L1Q9BXT6 1211 aaKnown RBP11.92□□□□□ -0.5
SMARCE1-202ENST00000348513 PARP2Q9UGN5 583 aa11.92□□□□□ -0.5
SMARCE1-202ENST00000348513 ARHGEF5Q12774 1597 aa11.92□□□□□ -0.5
SMARCE1-202ENST00000348513 SPDYE16A6NNV3 312 aaPredicted RBP11.92□□□□□ -0.5
SMARCE1-202ENST00000348513 C21orf2O43822 256 aa11.92□□□□□ -0.5
SMARCE1-202ENST00000348513 BBOX1O75936 387 aa11.92□□□□□ -0.5
SMARCE1-202ENST00000348513 SPDYE2Q495Y8 402 aa11.92□□□□□ -0.5
SMARCE1-202ENST00000348513 NAA35Q5VZE5 725 aa11.92□□□□□ -0.5
SMARCE1-202ENST00000348513 ANKRD27Q96NW4 1050 aa11.92□□□□□ -0.5
SMARCE1-202ENST00000348513 DPH5Q9H2P9 285 aa11.92□□□□□ -0.5
SMARCE1-202ENST00000348513 RGS12O14924 1447 aa11.92□□□□□ -0.5
SMARCE1-202ENST00000348513 MAGEA13PA6NCF6 341 aa11.92□□□□□ -0.5
SMARCE1-202ENST00000348513 KRIT1O00522 736 aa11.92□□□□□ -0.5
SMARCE1-202ENST00000348513 CLIC2O15247 247 aa11.92□□□□□ -0.5
SMARCE1-202ENST00000348513 TRIM60Q495X7 471 aa11.92□□□□□ -0.5
SMARCE1-202ENST00000348513 C4orf50Q6ZRC1 276 aa11.92□□□□□ -0.5
SMARCE1-202ENST00000348513 NRBF2Q96F24 287 aa11.92□□□□□ -0.5
SMARCE1-202ENST00000348513 CFAP36Q96G28 342 aa11.92□□□□□ -0.5
SMARCE1-202ENST00000348513 EPS15L1Q9UBC2 864 aa11.92□□□□□ -0.5
SMARCE1-202ENST00000348513 SERPINB13Q9UIV8 391 aa11.92□□□□□ -0.5
SMARCE1-202ENST00000348513 PALLDQ8WX93 1383 aa11.91□□□□□ -0.5
SMARCE1-202ENST00000348513 HOXA13P31271 388 aaPredicted RBP11.91□□□□□ -0.5
SMARCE1-202ENST00000348513 MYL7Q01449 175 aa11.91□□□□□ -0.5
SMARCE1-202ENST00000348513 PTPN12Q05209 780 aaKnown RBP11.91□□□□□ -0.5
SMARCE1-202ENST00000348513 FAM129AQ9BZQ8 928 aa11.91□□□□□ -0.5
SMARCE1-202ENST00000348513 LCMT1Q9UIC8 334 aa11.91□□□□□ -0.5
SMARCE1-202ENST00000348513 MCF2P10911 925 aa11.91□□□□□ -0.5
SMARCE1-202ENST00000348513 LMNB1P20700 586 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms