RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 TCF15Q12870 199 aa11.09□□□□□ -0.63
MRPL55-204ENST00000348259 ADAM15Q13444 863 aa11.09□□□□□ -0.63
MRPL55-204ENST00000348259 WTAPQ15007 396 aa11.09□□□□□ -0.63
MRPL55-204ENST00000348259 SYNE3Q6ZMZ3 975 aa11.09□□□□□ -0.63
MRPL55-204ENST00000348259 IQCA1Q86XH1 822 aa11.09□□□□□ -0.63
MRPL55-204ENST00000348259 RNF135Q8IUD6 432 aa11.09□□□□□ -0.63
MRPL55-204ENST00000348259 LINC01599Q8WXQ3 324 aa11.09□□□□□ -0.63
MRPL55-204ENST00000348259 EDAQ92838 391 aa11.09□□□□□ -0.63
MRPL55-204ENST00000348259 ZSCAN10Q96SZ4 725 aaPredicted RBP11.09□□□□□ -0.63
MRPL55-204ENST00000348259 UBAC1Q9BSL1 405 aa11.09□□□□□ -0.63
MRPL55-204ENST00000348259 AMNQ9BXJ7 453 aa11.09□□□□□ -0.63
MRPL55-204ENST00000348259 IFIH1Q9BYX4 1025 aaKnown RBP11.09□□□□□ -0.63
MRPL55-204ENST00000348259 SLC12A7Q9Y666 1083 aa11.09□□□□□ -0.63
MRPL55-204ENST00000348259 ZNF292O60281 2723 aa11.08□□□□□ -0.64
MRPL55-204ENST00000348259 CCDC196A0A1B0GTZ2 297 aa11.08□□□□□ -0.64
MRPL55-204ENST00000348259 PALM3A6NDB9 673 aaPredicted RBP11.08□□□□□ -0.64
MRPL55-204ENST00000348259 LOC730098B7Z3J9 87 aa11.08□□□□□ -0.64
MRPL55-204ENST00000348259 LINC01565O15544 149 aa11.08□□□□□ -0.64
MRPL55-204ENST00000348259 ZBTB43O43298 467 aa11.08□□□□□ -0.64
MRPL55-204ENST00000348259 UPP2O95045 317 aa11.08□□□□□ -0.64
MRPL55-204ENST00000348259 CTSHP09668 335 aa11.08□□□□□ -0.64
MRPL55-204ENST00000348259 PARP1P09874 1014 aaKnown RBP11.08□□□□□ -0.64
MRPL55-204ENST00000348259 CALM1P0DP23 149 aa11.08□□□□□ -0.64
MRPL55-204ENST00000348259 CALM2P0DP24 149 aa11.08□□□□□ -0.64
MRPL55-204ENST00000348259 CALM3P0DP25 149 aa11.08□□□□□ -0.64
MRPL55-204ENST00000348259 METAP2P50579 478 aaKnown RBP eCLIP11.08□□□□□ -0.64
MRPL55-204ENST00000348259 CCT2P78371 535 aaKnown RBP11.08□□□□□ -0.64
MRPL55-204ENST00000348259 IER5LQ5T953 404 aa11.08□□□□□ -0.64
MRPL55-204ENST00000348259 CPLX2Q6PUV4 134 aaKnown RBP11.08□□□□□ -0.64
MRPL55-204ENST00000348259 FIBCD1Q8N539 461 aa11.08□□□□□ -0.64
MRPL55-204ENST00000348259 LMBR1Q8WVP7 490 aa11.08□□□□□ -0.64
MRPL55-204ENST00000348259 MFSD14AQ96MC6 490 aa11.08□□□□□ -0.64
MRPL55-204ENST00000348259 GPR20Q99678 358 aa11.08□□□□□ -0.64
MRPL55-204ENST00000348259 ZSCAN16Q9H4T2 348 aaPredicted RBP11.08□□□□□ -0.64
MRPL55-204ENST00000348259 KAT14Q9H8E8 782 aa11.08□□□□□ -0.64
MRPL55-204ENST00000348259 SETD4Q9NVD3 440 aa11.08□□□□□ -0.64
MRPL55-204ENST00000348259 CLEC1BQ9P126 229 aa11.08□□□□□ -0.64
MRPL55-204ENST00000348259 MAD2L2Q9UI95 211 aa11.08□□□□□ -0.64
MRPL55-204ENST00000348259 CACNA1AO00555 2505 aa11.08□□□□□ -0.64
MRPL55-204ENST00000348259 SPATA31C2B4DYI2 1134 aa11.07□□□□□ -0.64
MRPL55-204ENST00000348259 CPLX1O14810 134 aa11.07□□□□□ -0.64
MRPL55-204ENST00000348259 ZBTB5O15062 677 aa11.07□□□□□ -0.64
MRPL55-204ENST00000348259 CYTH3O43739 400 aa11.07□□□□□ -0.64
MRPL55-204ENST00000348259 SORBS3O60504 671 aa11.07□□□□□ -0.64
MRPL55-204ENST00000348259 JAK2O60674 1132 aa11.07□□□□□ -0.64
MRPL55-204ENST00000348259 GLP2RO95838 553 aa11.07□□□□□ -0.64
MRPL55-204ENST00000348259 MYCLP12524 364 aaPredicted RBP11.07□□□□□ -0.64
MRPL55-204ENST00000348259 FDPSP14324 419 aaKnown RBP11.07□□□□□ -0.64
MRPL55-204ENST00000348259 DNAJB1P25685 340 aa11.07□□□□□ -0.64
MRPL55-204ENST00000348259 HOXA13P31271 388 aaPredicted RBP11.07□□□□□ -0.64
MRPL55-204ENST00000348259 CTNNB1P35222 781 aa11.07□□□□□ -0.64
MRPL55-204ENST00000348259 LPIN1Q14693 890 aa11.07□□□□□ -0.64
MRPL55-204ENST00000348259 NTRK3Q16288 839 aa11.07□□□□□ -0.64
MRPL55-204ENST00000348259 METTL7BQ6UX53 244 aa11.07□□□□□ -0.64
MRPL55-204ENST00000348259 NFXL1Q6ZNB6 911 aa11.07□□□□□ -0.64
MRPL55-204ENST00000348259 TRIM50Q86XT4 487 aa11.07□□□□□ -0.64
MRPL55-204ENST00000348259 FAM184AQ8NB25 1140 aa11.07□□□□□ -0.64
MRPL55-204ENST00000348259 TMEM87AQ8NBN3 555 aa11.07□□□□□ -0.64
MRPL55-204ENST00000348259 SMRP1Q8NCR6 262 aa11.07□□□□□ -0.64
MRPL55-204ENST00000348259 P2RX5Q93086 422 aa11.07□□□□□ -0.64
MRPL55-204ENST00000348259 ZFP91Q96JP5 570 aaPredicted RBP11.07□□□□□ -0.64
MRPL55-204ENST00000348259 MAP3K14Q99558 947 aa11.07□□□□□ -0.64
MRPL55-204ENST00000348259 POP1Q99575 1024 aaKnown RBP11.07□□□□□ -0.64
MRPL55-204ENST00000348259 C11orf84Q9BUA3 381 aaPredicted RBP11.07□□□□□ -0.64
MRPL55-204ENST00000348259 PLVAPQ9BX97 442 aa11.07□□□□□ -0.64
MRPL55-204ENST00000348259 RIOX1Q9H6W3 641 aa11.07□□□□□ -0.64
MRPL55-204ENST00000348259 NCOA5Q9HCD5 579 aaKnown RBP11.07□□□□□ -0.64
MRPL55-204ENST00000348259 FAM217BQ9NTX9 383 aaPredicted RBP11.07□□□□□ -0.64
MRPL55-204ENST00000348259 RWDD3Q9Y3V2 267 aa11.07□□□□□ -0.64
MRPL55-204ENST00000348259 STK36Q9NRP7 1315 aa11.07□□□□□ -0.64
MRPL55-204ENST00000348259 RIF1Q5UIP0 2472 aaKnown RBP11.07□□□□□ -0.64
MRPL55-204ENST00000348259 MBLAC1A4D2B0 266 aaPredicted RBP11.06□□□□□ -0.64
MRPL55-204ENST00000348259 ENPP3O14638 875 aa11.06□□□□□ -0.64
MRPL55-204ENST00000348259 TRAK2O60296 914 aa11.06□□□□□ -0.64
MRPL55-204ENST00000348259 DGKIO75912 1065 aa11.06□□□□□ -0.64
MRPL55-204ENST00000348259 DDAH1O94760 285 aa11.06□□□□□ -0.64
MRPL55-204ENST00000348259 IFNAR1P17181 557 aa11.06□□□□□ -0.64
MRPL55-204ENST00000348259 CCND2P30279 289 aa11.06□□□□□ -0.64
MRPL55-204ENST00000348259 COASYQ13057 564 aa11.06□□□□□ -0.64
MRPL55-204ENST00000348259 CLUL1Q15846 466 aa11.06□□□□□ -0.64
MRPL55-204ENST00000348259 RUFY4Q6ZNE9 571 aa11.06□□□□□ -0.64
MRPL55-204ENST00000348259 TRIM67Q6ZTA4 783 aa11.06□□□□□ -0.64
MRPL55-204ENST00000348259 ADGRD2Q7Z7M1 963 aa11.06□□□□□ -0.64
MRPL55-204ENST00000348259 FANCBQ8NB91 859 aa11.06□□□□□ -0.64
MRPL55-204ENST00000348259 SPPL3Q8TCT6 385 aa11.06□□□□□ -0.64
MRPL55-204ENST00000348259 SENP2Q9HC62 589 aa11.06□□□□□ -0.64
MRPL55-204ENST00000348259 VAT1LQ9HCJ6 419 aa11.06□□□□□ -0.64
MRPL55-204ENST00000348259 LMBRD1Q9NUN5 540 aa11.06□□□□□ -0.64
MRPL55-204ENST00000348259 CD207Q9UJ71 328 aa11.06□□□□□ -0.64
MRPL55-204ENST00000348259 PLAGL2Q9UPG8 496 aa11.06□□□□□ -0.64
MRPL55-204ENST00000348259 PCDHA1Q9Y5I3 950 aa11.06□□□□□ -0.64
MRPL55-204ENST00000348259 DMXL1Q9Y485 3027 aa11.05□□□□□ -0.64
MRPL55-204ENST00000348259 TMEM221A6NGB7 291 aa11.05□□□□□ -0.64
MRPL55-204ENST00000348259 GOLGA8AA7E2F4 631 aa11.05□□□□□ -0.64
MRPL55-204ENST00000348259 KLRF2D3W0D1 207 aa11.05□□□□□ -0.64
MRPL55-204ENST00000348259 M0R296 226 aa11.05□□□□□ -0.64
MRPL55-204ENST00000348259 STXBP3O00186 592 aa11.05□□□□□ -0.64
MRPL55-204ENST00000348259 ZXDAP98168 799 aa11.05□□□□□ -0.64
MRPL55-204ENST00000348259 FBXO47Q5MNV8 452 aa11.05□□□□□ -0.64
MRPL55-204ENST00000348259 MARCH8Q5T0T0 291 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms