RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 MRPL11Q9Y3B7 192 aaKnown RBP18.78■□□□□ 0.6
SPAST-202ENST00000345662 ITIH6Q6UXX5 1313 aa18.77■□□□□ 0.6
SPAST-202ENST00000345662 PLEKHA8P1O95397 391 aa18.77■□□□□ 0.6
SPAST-202ENST00000345662 MXI1P50539 228 aa18.77■□□□□ 0.6
SPAST-202ENST00000345662 YARSP54577 528 aaKnown RBP18.77■□□□□ 0.6
SPAST-202ENST00000345662 CDC37Q16543 378 aaPredicted RBP18.77■□□□□ 0.6
SPAST-202ENST00000345662 HDAC11Q96DB2 347 aa18.77■□□□□ 0.6
SPAST-202ENST00000345662 SH3GLB2Q9NR46 395 aa18.77■□□□□ 0.6
SPAST-202ENST00000345662 ARL2BPQ9Y2Y0 163 aa18.77■□□□□ 0.6
SPAST-202ENST00000345662 KIF28PB7ZC32 967 aa18.77■□□□□ 0.6
SPAST-202ENST00000345662 DYNLT1P63172 113 aa18.77■□□□□ 0.6
SPAST-202ENST00000345662 ARHGAP10A1A4S6 786 aa18.77■□□□□ 0.6
SPAST-202ENST00000345662 KRT37O76014 449 aa18.77■□□□□ 0.6
SPAST-202ENST00000345662 SEMA3FQ13275 785 aa18.77■□□□□ 0.6
SPAST-202ENST00000345662 TRAPPC3LQ5T215 181 aa18.77■□□□□ 0.6
SPAST-202ENST00000345662 PIGSQ96S52 555 aa18.77■□□□□ 0.6
SPAST-202ENST00000345662 SPATA21Q7Z572 469 aa18.77■□□□□ 0.59
SPAST-202ENST00000345662 STAG2Q8N3U4 1231 aa18.77■□□□□ 0.59
SPAST-202ENST00000345662 TTC25Q96NG3 672 aa18.77■□□□□ 0.59
SPAST-202ENST00000345662 ORAI2Q96SN7 254 aa18.77■□□□□ 0.59
SPAST-202ENST00000345662 HNRNPDLO14979 420 aaKnown RBP18.76■□□□□ 0.59
SPAST-202ENST00000345662 DYNLL1P63167 89 aaKnown RBP18.76■□□□□ 0.59
SPAST-202ENST00000345662 SEC16BQ96JE7 1060 aa18.76■□□□□ 0.59
SPAST-202ENST00000345662 CHP1Q99653 195 aa18.76■□□□□ 0.59
SPAST-202ENST00000345662 AMNQ9BXJ7 453 aa18.76■□□□□ 0.59
SPAST-202ENST00000345662 PRDM4Q9UKN5 801 aa18.76■□□□□ 0.59
SPAST-202ENST00000345662 MED14O60244 1454 aa18.76■□□□□ 0.59
SPAST-202ENST00000345662 MAP3K15Q6ZN16 1313 aa18.76■□□□□ 0.59
SPAST-202ENST00000345662 PVALEFA0A1B0GWK0 134 aa18.76■□□□□ 0.59
SPAST-202ENST00000345662 PRAMEF22A3QJZ6 481 aa18.76■□□□□ 0.59
SPAST-202ENST00000345662 COPEO14579 308 aa18.76■□□□□ 0.59
SPAST-202ENST00000345662 RAD9BQ6WBX8 426 aa18.76■□□□□ 0.59
SPAST-202ENST00000345662 FAM161BQ96MY7 647 aa18.76■□□□□ 0.59
SPAST-202ENST00000345662 SLC40A1Q9NP59 571 aa18.76■□□□□ 0.59
SPAST-202ENST00000345662 A6NJR5 290 aa18.76■□□□□ 0.59
SPAST-202ENST00000345662 TMEM191BP0C7N4 346 aa18.76■□□□□ 0.59
SPAST-202ENST00000345662 NR1I3Q14994 352 aa18.76■□□□□ 0.59
SPAST-202ENST00000345662 DNAJC24Q6P3W2 148 aa18.76■□□□□ 0.59
SPAST-202ENST00000345662 TBC1D10CQ8IV04 446 aa18.76■□□□□ 0.59
SPAST-202ENST00000345662 OXER1Q8TDS5 423 aa18.76■□□□□ 0.59
SPAST-202ENST00000345662 ECM2O94769 699 aaPredicted RBP18.76■□□□□ 0.59
SPAST-202ENST00000345662 CCND1P24385 295 aa18.76■□□□□ 0.59
SPAST-202ENST00000345662 HSPA9P38646 679 aaKnown RBP18.76■□□□□ 0.59
SPAST-202ENST00000345662 BTDP43251 543 aa18.76■□□□□ 0.59
SPAST-202ENST00000345662 ARFIP2P53365 341 aa18.76■□□□□ 0.59
SPAST-202ENST00000345662 STRBPQ96SI9 672 aaKnown RBP18.76■□□□□ 0.59
SPAST-202ENST00000345662 HESX1Q9UBX0 185 aa18.76■□□□□ 0.59
SPAST-202ENST00000345662 TUBE1Q9UJT0 475 aa18.76■□□□□ 0.59
SPAST-202ENST00000345662 DCTN4Q9UJW0 460 aa18.76■□□□□ 0.59
SPAST-202ENST00000345662 SLC4A7Q9Y6M7 1214 aa18.76■□□□□ 0.59
SPAST-202ENST00000345662 GABPAQ06546 454 aa18.75■□□□□ 0.59
SPAST-202ENST00000345662 KLC1Q07866 573 aa18.75■□□□□ 0.59
SPAST-202ENST00000345662 DARS2Q6PI48 645 aaKnown RBP18.75■□□□□ 0.59
SPAST-202ENST00000345662 PCGF5Q86SE9 256 aa18.75■□□□□ 0.59
SPAST-202ENST00000345662 MXD3Q9BW11 206 aa18.75■□□□□ 0.59
SPAST-202ENST00000345662 UPF3AQ9H1J1 476 aaKnown RBP18.75■□□□□ 0.59
SPAST-202ENST00000345662 PCIF1Q9H4Z3 704 aa18.75■□□□□ 0.59
SPAST-202ENST00000345662 DNAJC12Q9UKB3 198 aa18.75■□□□□ 0.59
SPAST-202ENST00000345662 TTC1Q99614 292 aa18.75■□□□□ 0.59
SPAST-202ENST00000345662 PARVGQ9HBI0 331 aa18.75■□□□□ 0.59
SPAST-202ENST00000345662 PIH1D3Q9NQM4 214 aaKnown RBP18.75■□□□□ 0.59
SPAST-202ENST00000345662 MEIS1O00470 390 aa18.75■□□□□ 0.59
SPAST-202ENST00000345662 TTI1O43156 1089 aa18.75■□□□□ 0.59
SPAST-202ENST00000345662 FAM107AO95990 144 aa18.75■□□□□ 0.59
SPAST-202ENST00000345662 BRD2P25440 801 aaKnown RBP18.75■□□□□ 0.59
SPAST-202ENST00000345662 SLFN13Q68D06 897 aa18.75■□□□□ 0.59
SPAST-202ENST00000345662 LRRC31Q6UY01 552 aa18.75■□□□□ 0.59
SPAST-202ENST00000345662 TEX9Q8N6V9 391 aa18.75■□□□□ 0.59
SPAST-202ENST00000345662 CYFIP2Q96F07 1278 aa18.75■□□□□ 0.59
SPAST-202ENST00000345662 EDEM3Q9BZQ6 932 aa18.75■□□□□ 0.59
SPAST-202ENST00000345662 APOBEC2Q9Y235 224 aaKnown RBP18.75■□□□□ 0.59
SPAST-202ENST00000345662 PLEKHG1Q9ULL1 1385 aa18.75■□□□□ 0.59
SPAST-202ENST00000345662 AGTP01019 485 aa18.75■□□□□ 0.59
SPAST-202ENST00000345662 CYB5R4Q7L1T6 521 aa18.75■□□□□ 0.59
SPAST-202ENST00000345662 NOA1Q8NC60 698 aaKnown RBP18.75■□□□□ 0.59
SPAST-202ENST00000345662 MID2Q9UJV3 735 aa18.75■□□□□ 0.59
SPAST-202ENST00000345662 TESPA1A2RU30 521 aaPredicted RBP18.74■□□□□ 0.59
SPAST-202ENST00000345662 PSMD14O00487 310 aa18.74■□□□□ 0.59
SPAST-202ENST00000345662 RCAN1P53805 252 aa18.74■□□□□ 0.59
SPAST-202ENST00000345662 FMR1Q06787 632 aaKnown RBP eCLIP18.74■□□□□ 0.59
SPAST-202ENST00000345662 DHX34Q14147 1143 aaKnown RBP18.74■□□□□ 0.59
SPAST-202ENST00000345662 RGS9BPQ6ZS82 235 aa18.74■□□□□ 0.59
SPAST-202ENST00000345662 NACC1Q96RE7 527 aa18.74■□□□□ 0.59
SPAST-202ENST00000345662 AMACRQ9UHK6 382 aa18.74■□□□□ 0.59
SPAST-202ENST00000345662 UBN2Q6ZU65 1347 aa18.74■□□□□ 0.59
SPAST-202ENST00000345662 ANO5Q75V66 913 aa18.74■□□□□ 0.59
SPAST-202ENST00000345662 SUGCTQ9HAC7 445 aa18.74■□□□□ 0.59
SPAST-202ENST00000345662 ADD3Q9UEY8 706 aaKnown RBP18.74■□□□□ 0.59
SPAST-202ENST00000345662 PHF20L1A8MW92 1017 aa18.74■□□□□ 0.59
SPAST-202ENST00000345662 FXR1P51114 621 aaKnown RBP eCLIP18.74■□□□□ 0.59
SPAST-202ENST00000345662 ARL4CP56559 192 aa18.74■□□□□ 0.59
SPAST-202ENST00000345662 ZBTB8OSQ8IWT0 167 aa18.74■□□□□ 0.59
SPAST-202ENST00000345662 CDC27P30260 824 aa18.74■□□□□ 0.59
SPAST-202ENST00000345662 GPC5P78333 572 aa18.74■□□□□ 0.59
SPAST-202ENST00000345662 CFAP36Q96G28 342 aa18.74■□□□□ 0.59
SPAST-202ENST00000345662 PRMT1Q99873 361 aaKnown RBP18.74■□□□□ 0.59
SPAST-202ENST00000345662 FAM96AQ9H5X1 160 aa18.74■□□□□ 0.59
SPAST-202ENST00000345662 SMYD3Q9H7B4 428 aa18.74■□□□□ 0.59
SPAST-202ENST00000345662 G3BP2Q9UN86 482 aaKnown RBP18.74■□□□□ 0.59
SPAST-202ENST00000345662 KCNH2Q12809 1159 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms