RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 RNF103-CHMP3A0A140T963 221 aa20.73■□□□□ 0.91
HDAC4-201ENST00000345617 OTUD7AQ8TE49 926 aaPredicted RBP20.73■□□□□ 0.91
HDAC4-201ENST00000345617 CARSP49589 748 aaKnown RBP20.73■□□□□ 0.91
HDAC4-201ENST00000345617 MRPS35P82673 323 aaKnown RBP20.73■□□□□ 0.91
HDAC4-201ENST00000345617 OSBPL9Q96SU4 736 aa20.73■□□□□ 0.91
HDAC4-201ENST00000345617 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.73■□□□□ 0.91
HDAC4-201ENST00000345617 DDX28Q9NUL7 540 aaKnown RBP20.73■□□□□ 0.91
HDAC4-201ENST00000345617 MYH3P11055 1940 aa20.73■□□□□ 0.91
HDAC4-201ENST00000345617 PAPOLAP51003 745 aaKnown RBP20.73■□□□□ 0.91
HDAC4-201ENST00000345617 CC2D1AQ6P1N0 951 aaPredicted RBP20.73■□□□□ 0.91
HDAC4-201ENST00000345617 ATP11BQ9Y2G3 1177 aa20.73■□□□□ 0.91
HDAC4-201ENST00000345617 WDR64B1ANS9 1081 aa20.72■□□□□ 0.91
HDAC4-201ENST00000345617 ZBED1O96006 694 aa20.72■□□□□ 0.91
HDAC4-201ENST00000345617 HSPD1P10809 573 aaKnown RBP20.72■□□□□ 0.91
HDAC4-201ENST00000345617 NAA35Q5VZE5 725 aa20.72■□□□□ 0.91
HDAC4-201ENST00000345617 HORMAD1Q86X24 394 aa20.72■□□□□ 0.91
HDAC4-201ENST00000345617 KIAA1024Q9UPX6 916 aa20.72■□□□□ 0.91
HDAC4-201ENST00000345617 CHL1O00533 1208 aa20.72■□□□□ 0.91
HDAC4-201ENST00000345617 MYL10Q9BUA6 226 aa20.72■□□□□ 0.91
HDAC4-201ENST00000345617 EPN3Q9H201 632 aa20.72■□□□□ 0.91
HDAC4-201ENST00000345617 TNNQ9UQP3 1299 aa20.72■□□□□ 0.91
HDAC4-201ENST00000345617 RSPH10B2B2RC85 870 aa20.72■□□□□ 0.91
HDAC4-201ENST00000345617 RSPH10BP0C881 870 aa20.72■□□□□ 0.91
HDAC4-201ENST00000345617 SLCO1A2P46721 670 aa20.72■□□□□ 0.91
HDAC4-201ENST00000345617 TRADDQ15628 312 aa20.72■□□□□ 0.91
HDAC4-201ENST00000345617 XKR9Q5GH70 373 aa20.72■□□□□ 0.91
HDAC4-201ENST00000345617 TTLL11Q8NHH1 800 aa20.72■□□□□ 0.91
HDAC4-201ENST00000345617 ACCSQ96QU6 501 aa20.72■□□□□ 0.91
HDAC4-201ENST00000345617 PCDHA4Q9UN74 947 aa20.72■□□□□ 0.91
HDAC4-201ENST00000345617 ZMYND10O75800 440 aa20.72■□□□□ 0.91
HDAC4-201ENST00000345617 KDM4CQ9H3R0 1056 aa20.72■□□□□ 0.91
HDAC4-201ENST00000345617 AS3MTQ9HBK9 375 aa20.72■□□□□ 0.91
HDAC4-201ENST00000345617 WDR17Q8IZU2 1322 aa20.72■□□□□ 0.91
HDAC4-201ENST00000345617 MFAP3LO75121 409 aa20.72■□□□□ 0.91
HDAC4-201ENST00000345617 HSPA13P48723 471 aa20.72■□□□□ 0.91
HDAC4-201ENST00000345617 DDX42Q86XP3 938 aaKnown RBP eCLIP20.72■□□□□ 0.91
HDAC4-201ENST00000345617 SPDYE2BA6NHP3 402 aa20.72■□□□□ 0.91
HDAC4-201ENST00000345617 PRR23D1E9PI22 279 aaPredicted RBP20.72■□□□□ 0.91
HDAC4-201ENST00000345617 ADAMTS2O95450 1211 aa20.72■□□□□ 0.91
HDAC4-201ENST00000345617 SPDYE6P0CI01 402 aa20.72■□□□□ 0.91
HDAC4-201ENST00000345617 PRR23D2P0DMB1 279 aaPredicted RBP20.72■□□□□ 0.91
HDAC4-201ENST00000345617 TMED8Q6PL24 325 aaPredicted RBP20.72■□□□□ 0.91
HDAC4-201ENST00000345617 PNMA1Q8ND90 353 aa20.72■□□□□ 0.91
HDAC4-201ENST00000345617 ZNF555Q8NEP9 628 aa20.72■□□□□ 0.91
HDAC4-201ENST00000345617 CALB1P05937 261 aa20.72■□□□□ 0.91
HDAC4-201ENST00000345617 RDH13Q8NBN7 331 aa20.72■□□□□ 0.91
HDAC4-201ENST00000345617 ECT2Q9H8V3 914 aa20.71■□□□□ 0.91
HDAC4-201ENST00000345617 PBXIP1Q96AQ6 731 aa20.71■□□□□ 0.91
HDAC4-201ENST00000345617 SCRN1Q12765 414 aa20.71■□□□□ 0.91
HDAC4-201ENST00000345617 CFAP36Q96G28 342 aa20.71■□□□□ 0.91
HDAC4-201ENST00000345617 MOV10L1Q9BXT6 1211 aaKnown RBP20.71■□□□□ 0.91
HDAC4-201ENST00000345617 GPBP1L1Q9HC44 474 aaPredicted RBP20.71■□□□□ 0.91
HDAC4-201ENST00000345617 KRT87PA6NCN2 255 aa20.71■□□□□ 0.91
HDAC4-201ENST00000345617 EFTUD2Q15029 972 aaKnown RBP eCLIP20.71■□□□□ 0.919e-7■■■□□ 18.9
HDAC4-201ENST00000345617 SPDYE1Q8NFV5 336 aaPredicted RBP20.71■□□□□ 0.91
HDAC4-201ENST00000345617 XPAP23025 273 aaPredicted RBP20.71■□□□□ 0.91
HDAC4-201ENST00000345617 CDHR1Q96JP9 859 aa20.71■□□□□ 0.91
HDAC4-201ENST00000345617 MAP2P11137 1827 aaKnown RBP20.71■□□□□ 0.91
HDAC4-201ENST00000345617 GJA10Q969M2 543 aa20.71■□□□□ 0.91
HDAC4-201ENST00000345617 CROCCQ5TZA2 2017 aa20.71■□□□□ 0.91
HDAC4-201ENST00000345617 H0Y3Z8 333 aa20.71■□□□□ 0.91
HDAC4-201ENST00000345617 HAUS5O94927 633 aa20.71■□□□□ 0.91
HDAC4-201ENST00000345617 CCND1P24385 295 aa20.71■□□□□ 0.91
HDAC4-201ENST00000345617 GUCY1A3Q02108 690 aa20.71■□□□□ 0.91
HDAC4-201ENST00000345617 INPP5AQ14642 412 aa20.71■□□□□ 0.91
HDAC4-201ENST00000345617 CPSF3Q9UKF6 684 aaKnown RBP20.71■□□□□ 0.91
HDAC4-201ENST00000345617 RGS9BPQ6ZS82 235 aa20.7■□□□□ 0.9
HDAC4-201ENST00000345617 ELAC2Q9BQ52 826 aaKnown RBP20.7■□□□□ 0.9
HDAC4-201ENST00000345617 SUFUQ9UMX1 484 aa20.7■□□□□ 0.9
HDAC4-201ENST00000345617 RAB14P61106 215 aa20.7■□□□□ 0.9
HDAC4-201ENST00000345617 NLRP14Q86W24 1093 aa20.7■□□□□ 0.9
HDAC4-201ENST00000345617 EPAS1Q99814 870 aa20.7■□□□□ 0.9
HDAC4-201ENST00000345617 SMYD3Q9H7B4 428 aa20.7■□□□□ 0.9
HDAC4-201ENST00000345617 SERPINB1P30740 379 aa20.7■□□□□ 0.9
HDAC4-201ENST00000345617 CHRNA3P32297 505 aa20.7■□□□□ 0.9
HDAC4-201ENST00000345617 CIITAP33076 1130 aa20.7■□□□□ 0.9
HDAC4-201ENST00000345617 EIF4A3P38919 411 aaKnown RBP20.7■□□□□ 0.9
HDAC4-201ENST00000345617 TNIP2Q8NFZ5 429 aa20.7■□□□□ 0.9
HDAC4-201ENST00000345617 TAF1DQ9H5J8 278 aaPredicted RBP20.7■□□□□ 0.9
HDAC4-201ENST00000345617 ASAP2O43150 1006 aa20.7■□□□□ 0.9
HDAC4-201ENST00000345617 CXCR5P32302 372 aa20.7■□□□□ 0.9
HDAC4-201ENST00000345617 MYLK4Q86YV6 388 aaPredicted RBP20.7■□□□□ 0.9
HDAC4-201ENST00000345617 NACC1Q96RE7 527 aa20.7■□□□□ 0.9
HDAC4-201ENST00000345617 EHD2Q9NZN4 543 aa20.7■□□□□ 0.9
HDAC4-201ENST00000345617 NDUFAF2Q8N183 169 aa20.7■□□□□ 0.9
HDAC4-201ENST00000345617 STAMQ92783 540 aa20.7■□□□□ 0.9
HDAC4-201ENST00000345617 ETNK1Q9HBU6 452 aa20.7■□□□□ 0.9
HDAC4-201ENST00000345617 PCDHA5Q9Y5H7 936 aa20.7■□□□□ 0.9
HDAC4-201ENST00000345617 FAM133AQ8N9E0 248 aa20.7■□□□□ 0.9
HDAC4-201ENST00000345617 PARVGQ9HBI0 331 aa20.7■□□□□ 0.9
HDAC4-201ENST00000345617 IP6K1Q92551 441 aa20.7■□□□□ 0.9
HDAC4-201ENST00000345617 UBN1Q9NPG3 1134 aa20.7■□□□□ 0.9
HDAC4-201ENST00000345617 MRPS26Q9BYN8 205 aaKnown RBP20.69■□□□□ 0.9
HDAC4-201ENST00000345617 KLRF2D3W0D1 207 aa20.69■□□□□ 0.9
HDAC4-201ENST00000345617 HLA-DPA1P20036 260 aa20.69■□□□□ 0.9
HDAC4-201ENST00000345617 RAD23BP54727 409 aa20.69■□□□□ 0.9
HDAC4-201ENST00000345617 TIMM10P62072 90 aa20.69■□□□□ 0.9
HDAC4-201ENST00000345617 WDR11Q9BZH6 1224 aa20.69■□□□□ 0.9
HDAC4-201ENST00000345617 SLITRK6Q9H5Y7 841 aa20.69■□□□□ 0.9
HDAC4-201ENST00000345617 MAGOHP61326 146 aaKnown RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms