RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 TECP42680 631 aa13.3□□□□□ -0.28
SNCA-202ENST00000345009 CDK7P50613 346 aa13.3□□□□□ -0.28
SNCA-202ENST00000345009 RTP1P59025 263 aa13.3□□□□□ -0.28
SNCA-202ENST00000345009 PSMC6P62333 389 aa13.3□□□□□ -0.28
SNCA-202ENST00000345009 TLE2Q04725 743 aa13.3□□□□□ -0.28
SNCA-202ENST00000345009 EPHA7Q15375 998 aa13.3□□□□□ -0.28
SNCA-202ENST00000345009 NCAPH2Q6IBW4 605 aa13.3□□□□□ -0.28
SNCA-202ENST00000345009 ANKRD33Q7Z3H0 272 aa13.3□□□□□ -0.28
SNCA-202ENST00000345009 SESTD1Q86VW0 696 aa13.3□□□□□ -0.28
SNCA-202ENST00000345009 SLC43A3Q8NBI5 491 aa13.3□□□□□ -0.28
SNCA-202ENST00000345009 NEK9Q8TD19 979 aa13.3□□□□□ -0.28
SNCA-202ENST00000345009 KHSRPQ92945 711 aaKnown RBP eCLIP13.3□□□□□ -0.28
SNCA-202ENST00000345009 GJA10Q969M2 543 aa13.3□□□□□ -0.28
SNCA-202ENST00000345009 DDX27Q96GQ7 796 aaKnown RBP13.3□□□□□ -0.28
SNCA-202ENST00000345009 FAM167AQ96KS9 214 aa13.3□□□□□ -0.28
SNCA-202ENST00000345009 TMEM60Q9H2L4 133 aa13.3□□□□□ -0.28
SNCA-202ENST00000345009 VAV3Q9UKW4 847 aa13.3□□□□□ -0.28
SNCA-202ENST00000345009 CFAP45Q9UL16 551 aa13.3□□□□□ -0.28
SNCA-202ENST00000345009 MAFBQ9Y5Q3 323 aaPredicted RBP13.3□□□□□ -0.28
SNCA-202ENST00000345009 NRCAMQ92823 1304 aa13.3□□□□□ -0.28
SNCA-202ENST00000345009 FRMPD3Q5JV73 1810 aa13.29□□□□□ -0.28
SNCA-202ENST00000345009 POTEB3A0JP26 581 aa13.29□□□□□ -0.28
SNCA-202ENST00000345009 RRN3P2A6NIE6 340 aa13.29□□□□□ -0.28
SNCA-202ENST00000345009 WNT7AO00755 349 aa13.29□□□□□ -0.28
SNCA-202ENST00000345009 HBP1O60381 514 aa13.29□□□□□ -0.28
SNCA-202ENST00000345009 P4HBP07237 508 aaKnown RBP13.29□□□□□ -0.28
SNCA-202ENST00000345009 QARSP47897 775 aaKnown RBP13.29□□□□□ -0.28
SNCA-202ENST00000345009 PSMC5P62195 406 aa13.29□□□□□ -0.28
SNCA-202ENST00000345009 NBR1Q14596 966 aa13.29□□□□□ -0.28
SNCA-202ENST00000345009 LRRC26Q2I0M4 334 aa13.29□□□□□ -0.28
SNCA-202ENST00000345009 TRIM60Q495X7 471 aa13.29□□□□□ -0.28
SNCA-202ENST00000345009 FOXD4L5Q5VV16 416 aaPredicted RBP13.29□□□□□ -0.28
SNCA-202ENST00000345009 POTEBQ6S5H4 581 aa13.29□□□□□ -0.28
SNCA-202ENST00000345009 B3GNT9Q6UX72 402 aa13.29□□□□□ -0.28
SNCA-202ENST00000345009 FOXD4L4Q8WXT5 416 aaPredicted RBP13.29□□□□□ -0.28
SNCA-202ENST00000345009 GABBR1Q9UBS5 961 aa13.29□□□□□ -0.28
SNCA-202ENST00000345009 PDE4DIPQ5VU43 2346 aa13.29□□□□□ -0.28
SNCA-202ENST00000345009 CEP290O15078 2479 aa13.29□□□□□ -0.28
SNCA-202ENST00000345009 C17orf102A2RUQ5 167 aa13.28□□□□□ -0.28
SNCA-202ENST00000345009 SMIM10L2AP0DMW4 78 aa13.28□□□□□ -0.28
SNCA-202ENST00000345009 SMIM10L2BP0DMW5 78 aa13.28□□□□□ -0.28
SNCA-202ENST00000345009 MARK3P27448 753 aa13.28□□□□□ -0.28
SNCA-202ENST00000345009 ATP2C1P98194 919 aaPredicted RBP13.28□□□□□ -0.28
SNCA-202ENST00000345009 PPFIA1Q13136 1202 aa13.28□□□□□ -0.28
SNCA-202ENST00000345009 SF3A1Q15459 793 aaKnown RBP13.28□□□□□ -0.28
SNCA-202ENST00000345009 PTGISQ16647 500 aa13.28□□□□□ -0.28
SNCA-202ENST00000345009 HAUS3Q68CZ6 603 aa13.28□□□□□ -0.28
SNCA-202ENST00000345009 GPR153Q6NV75 609 aa13.28□□□□□ -0.28
SNCA-202ENST00000345009 OTUD6AQ7L8S5 288 aa13.28□□□□□ -0.28
SNCA-202ENST00000345009 TRIM50Q86XT4 487 aa13.28□□□□□ -0.28
SNCA-202ENST00000345009 CCDC60Q8IWA6 550 aaPredicted RBP13.28□□□□□ -0.28
SNCA-202ENST00000345009 C4orf32Q8N8J7 132 aa13.28□□□□□ -0.28
SNCA-202ENST00000345009 ATP8B4Q8TF62 1192 aa13.28□□□□□ -0.28
SNCA-202ENST00000345009 RNPEPQ9H4A4 650 aa13.28□□□□□ -0.28
SNCA-202ENST00000345009 ZSWIM4Q9H7M6 989 aa13.28□□□□□ -0.28
SNCA-202ENST00000345009 TMEM39AQ9NV64 488 aa13.28□□□□□ -0.28
SNCA-202ENST00000345009 HDAC6Q9UBN7 1215 aa13.28□□□□□ -0.28
SNCA-202ENST00000345009 LRWD1Q9UFC0 647 aa13.28□□□□□ -0.28
SNCA-202ENST00000345009 GTF2IRD1Q9UHL9 959 aa13.28□□□□□ -0.28
SNCA-202ENST00000345009 GRIN2DO15399 1336 aa13.28□□□□□ -0.28
SNCA-202ENST00000345009 SCN10AQ9Y5Y9 1956 aa13.27□□□□□ -0.28
SNCA-202ENST00000345009 BRD1O95696 1058 aa13.27□□□□□ -0.29
SNCA-202ENST00000345009 RPLP2P05387 115 aaKnown RBP13.27□□□□□ -0.29
SNCA-202ENST00000345009 CLTBP09497 229 aa13.27□□□□□ -0.29
SNCA-202ENST00000345009 XKR3Q5GH77 459 aa13.27□□□□□ -0.29
SNCA-202ENST00000345009 ZNF484Q5JVG2 852 aa13.27□□□□□ -0.29
SNCA-202ENST00000345009 KRT79Q5XKE5 535 aa13.27□□□□□ -0.29
SNCA-202ENST00000345009 TPH2Q8IWU9 490 aa13.27□□□□□ -0.29
SNCA-202ENST00000345009 FAM126BQ8IXS8 530 aa13.27□□□□□ -0.29
SNCA-202ENST00000345009 EXOC8Q8IYI6 725 aa13.27□□□□□ -0.29
SNCA-202ENST00000345009 CCDC155Q8N6L0 562 aa13.27□□□□□ -0.29
SNCA-202ENST00000345009 AK8Q96MA6 479 aa13.27□□□□□ -0.29
SNCA-202ENST00000345009 PCYT2Q99447 389 aa13.27□□□□□ -0.29
SNCA-202ENST00000345009 EIF2AK1Q9BQI3 630 aaKnown RBP13.27□□□□□ -0.29
SNCA-202ENST00000345009 RBM19Q9Y4C8 960 aaKnown RBP13.27□□□□□ -0.29
SNCA-202ENST00000345009 TELO2Q9Y4R8 837 aa13.27□□□□□ -0.29
SNCA-202ENST00000345009 PCDHGA4Q9Y5G9 962 aa13.27□□□□□ -0.29
SNCA-202ENST00000345009 KAT6AQ92794 2004 aa13.27□□□□□ -0.29
SNCA-202ENST00000345009 VWA3AA6NCI4 1184 aa13.26□□□□□ -0.29
SNCA-202ENST00000345009 EML1O00423 815 aa13.26□□□□□ -0.29
SNCA-202ENST00000345009 SLC34A2O95436 690 aa13.26□□□□□ -0.29
SNCA-202ENST00000345009 OATP04181 439 aa13.26□□□□□ -0.29
SNCA-202ENST00000345009 MUTP22033 750 aa13.26□□□□□ -0.29
SNCA-202ENST00000345009 CEBPZQ03701 1054 aaKnown RBP13.26□□□□□ -0.29
SNCA-202ENST00000345009 SPIRE1Q08AE8 756 aa13.26□□□□□ -0.29
SNCA-202ENST00000345009 BFSP2Q13515 415 aa13.26□□□□□ -0.29
SNCA-202ENST00000345009 PLCB4Q15147 1175 aa13.26□□□□□ -0.29
SNCA-202ENST00000345009 STK38Q15208 465 aa13.26□□□□□ -0.29
SNCA-202ENST00000345009 GRIK4Q16099 956 aa13.26□□□□□ -0.29
SNCA-202ENST00000345009 TAF2Q6P1X5 1199 aa13.26□□□□□ -0.29
SNCA-202ENST00000345009 RSPH3Q86UC2 560 aa13.26□□□□□ -0.29
SNCA-202ENST00000345009 C7orf61Q8IZ16 206 aa13.26□□□□□ -0.29
SNCA-202ENST00000345009 BANK1Q8NDB2 785 aa13.26□□□□□ -0.29
SNCA-202ENST00000345009 CCDC43Q96MW1 224 aaKnown RBP13.26□□□□□ -0.29
SNCA-202ENST00000345009 TRPV6Q9H1D0 765 aa13.26□□□□□ -0.29
SNCA-202ENST00000345009 TUFT1Q9NNX1 390 aa13.26□□□□□ -0.29
SNCA-202ENST00000345009 SETD4Q9NVD3 440 aa13.26□□□□□ -0.29
SNCA-202ENST00000345009 PPME1Q9Y570 386 aa13.26□□□□□ -0.29
SNCA-202ENST00000345009 CLIC4Q9Y696 253 aa13.26□□□□□ -0.29
SNCA-202ENST00000345009 MYH9P35579 1960 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms