RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 ZNF131P52739 623 aa7.79□□□□□ -1.16
VCAN-202ENST00000342785 SNX1Q13596 522 aa7.79□□□□□ -1.16
VCAN-202ENST00000342785 KRT27Q7Z3Y8 459 aa7.79□□□□□ -1.16
VCAN-202ENST00000342785 KSR1Q8IVT5 923 aa7.79□□□□□ -1.16
VCAN-202ENST00000342785 AS3MTQ9HBK9 375 aa7.79□□□□□ -1.16
VCAN-202ENST00000342785 TRPC6Q9Y210 931 aa7.79□□□□□ -1.16
VCAN-202ENST00000342785 PREX1Q8TCU6 1659 aa7.79□□□□□ -1.16
VCAN-202ENST00000342785 SSU72P8A0A1W2PR75 194 aa7.79□□□□□ -1.16
VCAN-202ENST00000342785 HMGB1P1B2RPK0 211 aaPredicted RBP7.79□□□□□ -1.16
VCAN-202ENST00000342785 POLR2BP30876 1174 aaKnown RBP7.79□□□□□ -1.16
VCAN-202ENST00000342785 PRR5LQ6MZQ0 368 aa7.79□□□□□ -1.16
VCAN-202ENST00000342785 CYP4F22Q6NT55 531 aa7.79□□□□□ -1.16
VCAN-202ENST00000342785 CCDC13Q8IYE1 715 aa7.79□□□□□ -1.16
VCAN-202ENST00000342785 PLCD3Q8N3E9 789 aa7.79□□□□□ -1.16
VCAN-202ENST00000342785 SLC17A8Q8NDX2 589 aa7.79□□□□□ -1.16
VCAN-202ENST00000342785 H2AFXP16104 143 aaPredicted RBP7.79□□□□□ -1.16
VCAN-202ENST00000342785 ZNF18P17022 549 aa7.79□□□□□ -1.16
VCAN-202ENST00000342785 CYP2C19P33261 490 aa7.79□□□□□ -1.16
VCAN-202ENST00000342785 PEX3P56589 373 aa7.79□□□□□ -1.16
VCAN-202ENST00000342785 ADCY1Q08828 1119 aa7.79□□□□□ -1.16
VCAN-202ENST00000342785 LGSNQ5TDP6 509 aa7.79□□□□□ -1.16
VCAN-202ENST00000342785 KAZNQ674X7 775 aa7.79□□□□□ -1.16
VCAN-202ENST00000342785 PADI6Q6TGC4 694 aa7.79□□□□□ -1.16
VCAN-202ENST00000342785 ADGRA1Q86SQ6 560 aa7.79□□□□□ -1.16
VCAN-202ENST00000342785 XXYLT1Q8NBI6 393 aa7.79□□□□□ -1.16
VCAN-202ENST00000342785 CCDC197Q8NCU1 140 aa7.79□□□□□ -1.16
VCAN-202ENST00000342785 BBOF1Q8ND07 529 aa7.79□□□□□ -1.16
VCAN-202ENST00000342785 PAGR1Q9BTK6 254 aa7.79□□□□□ -1.16
VCAN-202ENST00000342785 PLAAQ9Y263 795 aa7.79□□□□□ -1.16
VCAN-202ENST00000342785 RASGRF2O14827 1237 aa7.78□□□□□ -1.16
VCAN-202ENST00000342785 TRIM49P0CI25 452 aa7.78□□□□□ -1.16
VCAN-202ENST00000342785 TRIM49CP0CI26 452 aa7.78□□□□□ -1.16
VCAN-202ENST00000342785 MCUR1Q96AQ8 359 aa7.78□□□□□ -1.16
VCAN-202ENST00000342785 DYDC2Q96IM9 177 aa7.78□□□□□ -1.16
VCAN-202ENST00000342785 CLEC11AQ9Y240 323 aa7.78□□□□□ -1.16
VCAN-202ENST00000342785 CD2APQ9Y5K6 639 aa7.78□□□□□ -1.16
VCAN-202ENST00000342785 PPLO60437 1756 aa7.78□□□□□ -1.16
VCAN-202ENST00000342785 ASNSP08243 561 aa7.78□□□□□ -1.16
VCAN-202ENST00000342785 CLTAP09496 248 aa7.78□□□□□ -1.16
VCAN-202ENST00000342785 SLC8A3P57103 927 aa7.78□□□□□ -1.16
VCAN-202ENST00000342785 YWHAEP62258 255 aaKnown RBP7.78□□□□□ -1.16
VCAN-202ENST00000342785 INTS5Q6P9B9 1019 aaKnown RBP7.78□□□□□ -1.16
VCAN-202ENST00000342785 TXNRD3Q86VQ6 643 aa7.78□□□□□ -1.16
VCAN-202ENST00000342785 RSAD2Q8WXG1 361 aa7.78□□□□□ -1.16
VCAN-202ENST00000342785 STMN2Q93045 179 aa7.78□□□□□ -1.16
VCAN-202ENST00000342785 NRBP2Q9NSY0 501 aa7.78□□□□□ -1.16
VCAN-202ENST00000342785 TFR2Q9UP52 801 aa7.78□□□□□ -1.16
VCAN-202ENST00000342785 PDS5AQ29RF7 1337 aaKnown RBP7.78□□□□□ -1.16
VCAN-202ENST00000342785 TCRBV5S4A2TA0A5A2 114 aa7.78□□□□□ -1.16
VCAN-202ENST00000342785 MIF4GDA9UHW6 222 aaKnown RBP7.78□□□□□ -1.16
VCAN-202ENST00000342785 DRAP1Q14919 205 aaPredicted RBP7.78□□□□□ -1.16
VCAN-202ENST00000342785 ZKSCAN8Q15776 578 aaPredicted RBP7.78□□□□□ -1.16
VCAN-202ENST00000342785 PKN1Q16512 942 aa7.78□□□□□ -1.16
VCAN-202ENST00000342785 HADHQ16836 314 aaKnown RBP7.78□□□□□ -1.16
VCAN-202ENST00000342785 RC3H1Q5TC82 1133 aaKnown RBP7.78□□□□□ -1.16
VCAN-202ENST00000342785 PALM2Q8IXS6 379 aa7.78□□□□□ -1.16
VCAN-202ENST00000342785 RGL1Q9NZL6 768 aa7.78□□□□□ -1.16
VCAN-202ENST00000342785 SEPT9Q9UHD8 586 aaPredicted RBP7.78□□□□□ -1.16
VCAN-202ENST00000342785 BCS1LQ9Y276 419 aa7.78□□□□□ -1.16
VCAN-202ENST00000342785 COMMD10Q9Y6G5 202 aa7.78□□□□□ -1.16
VCAN-202ENST00000342785 IVNS1ABPQ9Y6Y0 642 aa7.78□□□□□ -1.16
VCAN-202ENST00000342785 TARSL2A2RTX5 802 aaKnown RBP7.78□□□□□ -1.16
VCAN-202ENST00000342785 PSMD14O00487 310 aa7.78□□□□□ -1.16
VCAN-202ENST00000342785 RNF8O76064 485 aa7.78□□□□□ -1.16
VCAN-202ENST00000342785 PCK1P35558 622 aa7.78□□□□□ -1.16
VCAN-202ENST00000342785 EIF3BP55884 814 aaKnown RBP7.78□□□□□ -1.16
VCAN-202ENST00000342785 ERVK-24P63145 666 aa7.78□□□□□ -1.16
VCAN-202ENST00000342785 BRDTQ58F21 947 aaPredicted RBP7.78□□□□□ -1.16
VCAN-202ENST00000342785 CDKAL1Q5VV42 579 aa7.78□□□□□ -1.16
VCAN-202ENST00000342785 PHLDB2Q86SQ0 1253 aa7.78□□□□□ -1.16
VCAN-202ENST00000342785 LINC00116Q8NCU8 138 aa7.78□□□□□ -1.16
VCAN-202ENST00000342785 RIN2Q8WYP3 895 aaPredicted RBP7.78□□□□□ -1.16
VCAN-202ENST00000342785 PLAGL2Q9UPG8 496 aa7.78□□□□□ -1.16
VCAN-202ENST00000342785 ARHGEF28Q8N1W1 1705 aaKnown RBP7.78□□□□□ -1.16
VCAN-202ENST00000342785 PDHBP11177 359 aa7.78□□□□□ -1.16
VCAN-202ENST00000342785 SLMAPQ14BN4 828 aa7.78□□□□□ -1.16
VCAN-202ENST00000342785 PPP2R5AQ15172 486 aa7.78□□□□□ -1.16
VCAN-202ENST00000342785 CCNI2Q6ZMN8 369 aaPredicted RBP7.78□□□□□ -1.16
VCAN-202ENST00000342785 VPS52Q8N1B4 723 aa7.78□□□□□ -1.16
VCAN-202ENST00000342785 ERGIC2Q96RQ1 377 aa7.78□□□□□ -1.16
VCAN-202ENST00000342785 STK38LQ9Y2H1 464 aa7.78□□□□□ -1.16
VCAN-202ENST00000342785 PCDHB4Q9Y5E5 795 aa7.78□□□□□ -1.16
VCAN-202ENST00000342785 SLIT1O75093 1534 aa7.77□□□□□ -1.16
VCAN-202ENST00000342785 ESYT2A0FGR8 921 aa7.77□□□□□ -1.16
VCAN-202ENST00000342785 PDXKO00764 312 aa7.77□□□□□ -1.16
VCAN-202ENST00000342785 PPP4CP60510 307 aa7.77□□□□□ -1.16
VCAN-202ENST00000342785 ALCAMQ13740 583 aa7.77□□□□□ -1.16
VCAN-202ENST00000342785 SLC18A3Q16572 532 aa7.77□□□□□ -1.16
VCAN-202ENST00000342785 METTL13Q8N6R0 699 aa7.77□□□□□ -1.16
VCAN-202ENST00000342785 ARHGEF2Q92974 986 aaKnown RBP7.77□□□□□ -1.16
VCAN-202ENST00000342785 POC1B-GALNT4F8VUJ3 575 aa7.77□□□□□ -1.17
VCAN-202ENST00000342785 MAN1A1P33908 653 aa7.77□□□□□ -1.17
VCAN-202ENST00000342785 RWDD2BP57060 319 aa7.77□□□□□ -1.17
VCAN-202ENST00000342785 ZNF211Q13398 564 aaPredicted RBP7.77□□□□□ -1.17
VCAN-202ENST00000342785 NEDD9Q14511 834 aa7.77□□□□□ -1.17
VCAN-202ENST00000342785 EARS2Q5JPH6 523 aaKnown RBP7.77□□□□□ -1.17
VCAN-202ENST00000342785 C16orf86Q6ZW13 317 aa7.77□□□□□ -1.17
VCAN-202ENST00000342785 APBB1IPQ7Z5R6 666 aaPredicted RBP7.77□□□□□ -1.17
VCAN-202ENST00000342785 SP8Q8IXZ3 490 aa7.77□□□□□ -1.17
VCAN-202ENST00000342785 TRIM11Q96F44 468 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms