RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 SPATA4Q8NEY3 305 aa12.93□□□□□ -0.34
RTN3-203ENST00000341307 OPTNQ96CV9 577 aa12.93□□□□□ -0.34
RTN3-203ENST00000341307 ANKRD27Q96NW4 1050 aa12.93□□□□□ -0.34
RTN3-203ENST00000341307 NDNQ99608 321 aa12.93□□□□□ -0.34
RTN3-203ENST00000341307 MOV10L1Q9BXT6 1211 aaKnown RBP12.93□□□□□ -0.34
RTN3-203ENST00000341307 FAM205CA6NFA0 338 aa12.93□□□□□ -0.34
RTN3-203ENST00000341307 PDHA1P08559 390 aa12.93□□□□□ -0.34
RTN3-203ENST00000341307 TOB1P50616 345 aaPredicted RBP12.93□□□□□ -0.34
RTN3-203ENST00000341307 GSTO1P78417 241 aa12.93□□□□□ -0.34
RTN3-203ENST00000341307 PABPC4Q13310 644 aaKnown RBP eCLIP12.93□□□□□ -0.343e-7■■□□□ 12.6
RTN3-203ENST00000341307 MORC3Q14149 939 aa12.93□□□□□ -0.34
RTN3-203ENST00000341307 PTPAQ15257 358 aa12.93□□□□□ -0.34
RTN3-203ENST00000341307 RESP18Q5W5W9 173 aa12.93□□□□□ -0.34
RTN3-203ENST00000341307 NOSTRINQ8IVI9 506 aa12.93□□□□□ -0.34
RTN3-203ENST00000341307 SP8Q8IXZ3 490 aa12.93□□□□□ -0.34
RTN3-203ENST00000341307 TTLL6Q8N841 843 aa12.93□□□□□ -0.34
RTN3-203ENST00000341307 MASTLQ96GX5 879 aa12.93□□□□□ -0.34
RTN3-203ENST00000341307 ADAM22Q9P0K1 906 aa12.93□□□□□ -0.34
RTN3-203ENST00000341307 ATP6V0A2Q9Y487 856 aa12.93□□□□□ -0.34
RTN3-203ENST00000341307 LRRC42Q9Y546 428 aa12.93□□□□□ -0.34
RTN3-203ENST00000341307 PENKP01210 267 aaPredicted RBP12.92□□□□□ -0.34
RTN3-203ENST00000341307 VEGFAP15692 232 aaPredicted RBP12.92□□□□□ -0.34
RTN3-203ENST00000341307 RFC5P40937 340 aa12.92□□□□□ -0.34
RTN3-203ENST00000341307 MATR3P43243 847 aaKnown RBP eCLIP12.92□□□□□ -0.341e-6■■□□□ 13.3
RTN3-203ENST00000341307 CARSP49589 748 aaKnown RBP12.92□□□□□ -0.34
RTN3-203ENST00000341307 ENOX2Q16206 610 aaKnown RBP12.92□□□□□ -0.34
RTN3-203ENST00000341307 IFI16Q16666 785 aaKnown RBP12.92□□□□□ -0.34
RTN3-203ENST00000341307 OR52E8Q6IFG1 317 aa12.92□□□□□ -0.34
RTN3-203ENST00000341307 WASF1Q92558 559 aa12.92□□□□□ -0.34
RTN3-203ENST00000341307 NFU1Q9UMS0 254 aa12.92□□□□□ -0.34
RTN3-203ENST00000341307 ANO9A1A5B4 782 aa12.92□□□□□ -0.34
RTN3-203ENST00000341307 PCP11498 1178 aaKnown RBP12.92□□□□□ -0.34
RTN3-203ENST00000341307 IDEP14735 1019 aa12.92□□□□□ -0.34
RTN3-203ENST00000341307 DALRD3Q5D0E6 543 aaKnown RBP12.92□□□□□ -0.34
RTN3-203ENST00000341307 TMEM154Q6P9G4 183 aa12.92□□□□□ -0.34
RTN3-203ENST00000341307 CPLX4Q7Z7G2 160 aa12.92□□□□□ -0.34
RTN3-203ENST00000341307 LCA5Q86VQ0 697 aa12.92□□□□□ -0.34
RTN3-203ENST00000341307 SRBD1Q8N5C6 995 aaKnown RBP12.92□□□□□ -0.34
RTN3-203ENST00000341307 CCDC197Q8NCU1 140 aa12.92□□□□□ -0.34
RTN3-203ENST00000341307 C17orf50Q8WW18 174 aa12.92□□□□□ -0.34
RTN3-203ENST00000341307 KCNN1Q92952 543 aa12.92□□□□□ -0.34
RTN3-203ENST00000341307 MKNK2Q9HBH9 465 aa12.92□□□□□ -0.34
RTN3-203ENST00000341307 JADE2Q9NQC1 790 aa12.92□□□□□ -0.34
RTN3-203ENST00000341307 LTBP1Q14766 1721 aa12.91□□□□□ -0.34
RTN3-203ENST00000341307 RCCD1A6NED2 376 aa12.91□□□□□ -0.34
RTN3-203ENST00000341307 TMEM221A6NGB7 291 aa12.91□□□□□ -0.34
RTN3-203ENST00000341307 NPR1P16066 1061 aa12.91□□□□□ -0.34
RTN3-203ENST00000341307 SARSP49591 514 aaKnown RBP12.91□□□□□ -0.34
RTN3-203ENST00000341307 PPP4CP60510 307 aa12.91□□□□□ -0.34
RTN3-203ENST00000341307 NCALDP61601 193 aa12.91□□□□□ -0.34
RTN3-203ENST00000341307 FAM133BQ5BKY9 247 aaKnown RBP12.91□□□□□ -0.34
RTN3-203ENST00000341307 EARS2Q5JPH6 523 aaKnown RBP12.91□□□□□ -0.34
RTN3-203ENST00000341307 NT5DC1Q5TFE4 455 aa12.91□□□□□ -0.34
RTN3-203ENST00000341307 CHADLQ6NUI6 762 aa12.91□□□□□ -0.34
RTN3-203ENST00000341307 FAM114A1Q8IWE2 563 aa12.91□□□□□ -0.34
RTN3-203ENST00000341307 CCDC155Q8N6L0 562 aa12.91□□□□□ -0.34
RTN3-203ENST00000341307 SMCR8Q8TEV9 937 aaPredicted RBP12.91□□□□□ -0.34
RTN3-203ENST00000341307 RNF26Q9BY78 433 aaPredicted RBP12.91□□□□□ -0.34
RTN3-203ENST00000341307 SMARCAL1Q9NZC9 954 aa12.91□□□□□ -0.34
RTN3-203ENST00000341307 PLAAQ9Y263 795 aa12.91□□□□□ -0.34
RTN3-203ENST00000341307 BZW2Q9Y6E2 419 aaKnown RBP12.91□□□□□ -0.34
RTN3-203ENST00000341307 SLX4Q8IY92 1834 aa12.91□□□□□ -0.34
RTN3-203ENST00000341307 KIF13BQ9NQT8 1826 aa12.91□□□□□ -0.34
RTN3-203ENST00000341307 LDHCP07864 332 aa12.91□□□□□ -0.34
RTN3-203ENST00000341307 CYP11B2P19099 503 aa12.91□□□□□ -0.34
RTN3-203ENST00000341307 GJA8P48165 433 aa12.91□□□□□ -0.34
RTN3-203ENST00000341307 VAV2P52735 878 aa12.91□□□□□ -0.34
RTN3-203ENST00000341307 RCAN1P53805 252 aa12.91□□□□□ -0.34
RTN3-203ENST00000341307 BPIFB4P59827 614 aa12.91□□□□□ -0.34
RTN3-203ENST00000341307 GRIN1Q05586 938 aa12.91□□□□□ -0.34
RTN3-203ENST00000341307 SAFBQ15424 915 aaKnown RBP eCLIP12.91□□□□□ -0.34
RTN3-203ENST00000341307 CDKAL1Q5VV42 579 aa12.91□□□□□ -0.34
RTN3-203ENST00000341307 CERS5Q8N5B7 392 aa12.91□□□□□ -0.34
RTN3-203ENST00000341307 LACRTQ9GZZ8 138 aa12.91□□□□□ -0.34
RTN3-203ENST00000341307 CABP5Q9NP86 173 aa12.91□□□□□ -0.34
RTN3-203ENST00000341307 KCNQ5Q9NR82 932 aa12.91□□□□□ -0.34
RTN3-203ENST00000341307 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.91□□□□□ -0.34
RTN3-203ENST00000341307 BAZ2BQ9UIF8 2168 aaKnown RBP12.91□□□□□ -0.34
RTN3-203ENST00000341307 ZSCAN5CA6NGD5 496 aaPredicted RBP12.9□□□□□ -0.34
RTN3-203ENST00000341307 GLI1P08151 1106 aa12.9□□□□□ -0.34
RTN3-203ENST00000341307 KRT16P08779 473 aa12.9□□□□□ -0.34
RTN3-203ENST00000341307 DESP17661 470 aa12.9□□□□□ -0.34
RTN3-203ENST00000341307 GNAZP19086 355 aa12.9□□□□□ -0.34
RTN3-203ENST00000341307 GUCY2FP51841 1108 aa12.9□□□□□ -0.34
RTN3-203ENST00000341307 PRELPP51888 382 aa12.9□□□□□ -0.34
RTN3-203ENST00000341307 RHBDL3P58872 404 aa12.9□□□□□ -0.34
RTN3-203ENST00000341307 PICALMQ13492 652 aa12.9□□□□□ -0.34
RTN3-203ENST00000341307 SEPT2Q15019 361 aa12.9□□□□□ -0.34
RTN3-203ENST00000341307 TMTC3Q6ZXV5 915 aa12.9□□□□□ -0.34
RTN3-203ENST00000341307 LMNTD2Q8IXW0 634 aa12.9□□□□□ -0.34
RTN3-203ENST00000341307 FGD4Q96M96 766 aa12.9□□□□□ -0.34
RTN3-203ENST00000341307 TRAPPC9Q96Q05 1148 aa12.9□□□□□ -0.34
RTN3-203ENST00000341307 ZC3H12CQ9C0D7 883 aaKnown RBP12.9□□□□□ -0.34
RTN3-203ENST00000341307 DMAP1Q9NPF5 467 aaPredicted RBP12.9□□□□□ -0.34
RTN3-203ENST00000341307 GDF3Q9NR23 364 aa12.9□□□□□ -0.34
RTN3-203ENST00000341307 EHD2Q9NZN4 543 aa12.9□□□□□ -0.34
RTN3-203ENST00000341307 DACH1Q9UI36 760 aa12.9□□□□□ -0.34
RTN3-203ENST00000341307 SNX12Q9UMY4 172 aa12.9□□□□□ -0.34
RTN3-203ENST00000341307 PCDHB6Q9Y5E3 794 aa12.9□□□□□ -0.34
RTN3-203ENST00000341307 LRRC37AA6NMS7 1700 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms