RNA–Protein interactions for RNA: ENST00000339717.11

BRPF3-201, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-201ENST00000339717 ARHGEF11O15085 1522 aa13.55□□□□□ -0.24
BRPF3-201ENST00000339717 A0A0G2JND7 137 aa13.55□□□□□ -0.24
BRPF3-201ENST00000339717 PCP4L1A6NKN8 68 aa13.55□□□□□ -0.24
BRPF3-201ENST00000339717 HNRNPCL2B2RXH8 293 aa13.55□□□□□ -0.24
BRPF3-201ENST00000339717 BACH1O14867 736 aa13.55□□□□□ -0.24
BRPF3-201ENST00000339717 ATP1A1P05023 1023 aaKnown RBP13.55□□□□□ -0.24
BRPF3-201ENST00000339717 TNFAIP3P21580 790 aa13.55□□□□□ -0.24
BRPF3-201ENST00000339717 BTKQ06187 659 aa13.55□□□□□ -0.24
BRPF3-201ENST00000339717 KCNV1Q6PIU1 500 aa13.55□□□□□ -0.24
BRPF3-201ENST00000339717 GIPC3Q8TF64 312 aa13.55□□□□□ -0.24
BRPF3-201ENST00000339717 CNKSR1Q969H4 720 aa13.55□□□□□ -0.24
BRPF3-201ENST00000339717 HACD3Q9P035 362 aa13.55□□□□□ -0.24
BRPF3-201ENST00000339717 ARHGAP26Q9UNA1 814 aa13.55□□□□□ -0.24
BRPF3-201ENST00000339717 PCDHA13Q9Y5I0 950 aa13.55□□□□□ -0.24
BRPF3-201ENST00000339717 VAMP4O75379 141 aa13.55□□□□□ -0.24
BRPF3-201ENST00000339717 CA4P22748 312 aa13.55□□□□□ -0.24
BRPF3-201ENST00000339717 ARHGAP44Q17R89 818 aa13.55□□□□□ -0.24
BRPF3-201ENST00000339717 ZNF184Q99676 751 aaPredicted RBP13.55□□□□□ -0.24
BRPF3-201ENST00000339717 RXFP1Q9HBX9 757 aa13.55□□□□□ -0.24
BRPF3-201ENST00000339717 PODXLO00592 558 aa13.55□□□□□ -0.24
BRPF3-201ENST00000339717 RASSF9O75901 435 aa13.55□□□□□ -0.24
BRPF3-201ENST00000339717 ATF2P15336 505 aa13.55□□□□□ -0.24
BRPF3-201ENST00000339717 MRPL28Q13084 256 aaKnown RBP13.55□□□□□ -0.24
BRPF3-201ENST00000339717 CAPSLQ8WWF8 208 aa13.55□□□□□ -0.24
BRPF3-201ENST00000339717 OTUD5Q96G74 571 aa13.55□□□□□ -0.24
BRPF3-201ENST00000339717 RBM17Q96I25 401 aaKnown RBP13.55□□□□□ -0.24
BRPF3-201ENST00000339717 DACH2Q96NX9 599 aa13.55□□□□□ -0.24
BRPF3-201ENST00000339717 CCDC85AQ96PX6 553 aaPredicted RBP13.55□□□□□ -0.24
BRPF3-201ENST00000339717 PREBQ9HCU5 417 aa13.55□□□□□ -0.24
BRPF3-201ENST00000339717 ZNF212Q9UDV6 495 aa13.55□□□□□ -0.24
BRPF3-201ENST00000339717 GGT7Q9UJ14 662 aa13.55□□□□□ -0.24
BRPF3-201ENST00000339717 CAPN11Q9UMQ6 739 aa13.55□□□□□ -0.24
BRPF3-201ENST00000339717 SYNPO2Q9UMS6 1093 aa13.55□□□□□ -0.24
BRPF3-201ENST00000339717 PLB1Q6P1J6 1458 aa13.55□□□□□ -0.24
BRPF3-201ENST00000339717 CFAP69A5D8W1 941 aa13.55□□□□□ -0.24
BRPF3-201ENST00000339717 SHOX2O60902 331 aaPredicted RBP13.55□□□□□ -0.24
BRPF3-201ENST00000339717 UBOX5O94941 541 aa13.55□□□□□ -0.24
BRPF3-201ENST00000339717 S100A9P06702 114 aaKnown RBP13.55□□□□□ -0.24
BRPF3-201ENST00000339717 VAV1P15498 845 aa13.55□□□□□ -0.24
BRPF3-201ENST00000339717 C10orf76Q5T2E6 689 aa13.55□□□□□ -0.24
BRPF3-201ENST00000339717 NME9Q86XW9 330 aa13.55□□□□□ -0.24
BRPF3-201ENST00000339717 TATDN2Q93075 761 aa13.55□□□□□ -0.24
BRPF3-201ENST00000339717 CAVIN3Q969G5 261 aa13.55□□□□□ -0.24
BRPF3-201ENST00000339717 CDHR1Q96JP9 859 aa13.55□□□□□ -0.24
BRPF3-201ENST00000339717 CLIC6Q96NY7 704 aa13.55□□□□□ -0.24
BRPF3-201ENST00000339717 QKIQ96PU8 341 aaKnown RBP eCLIP13.55□□□□□ -0.24
BRPF3-201ENST00000339717 SLITRK6Q9H5Y7 841 aa13.55□□□□□ -0.24
BRPF3-201ENST00000339717 PIH1D3Q9NQM4 214 aaKnown RBP13.55□□□□□ -0.24
BRPF3-201ENST00000339717 SNX12Q9UMY4 172 aa13.55□□□□□ -0.24
BRPF3-201ENST00000339717 DIS3Q9Y2L1 958 aaKnown RBP13.55□□□□□ -0.24
BRPF3-201ENST00000339717 UNC13AQ9UPW8 1703 aa13.55□□□□□ -0.24
BRPF3-201ENST00000339717 ADGRL1O94910 1474 aa13.54□□□□□ -0.24
BRPF3-201ENST00000339717 CLASP2O75122 1294 aaKnown RBP13.54□□□□□ -0.24
BRPF3-201ENST00000339717 BRAFP15056 766 aa13.54□□□□□ -0.24
BRPF3-201ENST00000339717 ATP6V1B1P15313 513 aa13.54□□□□□ -0.24
BRPF3-201ENST00000339717 DR1Q01658 176 aa13.54□□□□□ -0.24
BRPF3-201ENST00000339717 RESTQ13127 1097 aa13.54□□□□□ -0.24
BRPF3-201ENST00000339717 TMED2Q15363 201 aa13.54□□□□□ -0.24
BRPF3-201ENST00000339717 TRIP10Q15642 601 aa13.54□□□□□ -0.24
BRPF3-201ENST00000339717 TSC22D1Q15714 1073 aa13.54□□□□□ -0.24
BRPF3-201ENST00000339717 ATG16L1Q676U5 607 aa13.54□□□□□ -0.24
BRPF3-201ENST00000339717 GALNT17Q6IS24 598 aa13.54□□□□□ -0.24
BRPF3-201ENST00000339717 CDR2LQ86X02 465 aaPredicted RBP13.54□□□□□ -0.24
BRPF3-201ENST00000339717 FAM207AQ9NSI2 230 aaPredicted RBP13.54□□□□□ -0.24
BRPF3-201ENST00000339717 DSEQ9UL01 958 aa13.54□□□□□ -0.24
BRPF3-201ENST00000339717 SP100P23497 879 aaPredicted RBP13.54□□□□□ -0.24
BRPF3-201ENST00000339717 EIF4BP23588 611 aaKnown RBP13.54□□□□□ -0.24
BRPF3-201ENST00000339717 ADCY8P40145 1251 aa13.54□□□□□ -0.24
BRPF3-201ENST00000339717 FNTAP49354 379 aa13.54□□□□□ -0.24
BRPF3-201ENST00000339717 IGBP1P78318 339 aa13.54□□□□□ -0.24
BRPF3-201ENST00000339717 SCG3Q8WXD2 468 aaKnown RBP13.54□□□□□ -0.24
BRPF3-201ENST00000339717 MTBPQ96DY7 904 aa13.54□□□□□ -0.24
BRPF3-201ENST00000339717 UPF3AQ9H1J1 476 aaKnown RBP13.54□□□□□ -0.24
BRPF3-201ENST00000339717 TMBIM4Q9HC24 238 aa13.54□□□□□ -0.24
BRPF3-201ENST00000339717 CHPF2Q9P2E5 772 aa13.54□□□□□ -0.24
BRPF3-201ENST00000339717 PPARGC1AQ9UBK2 798 aaKnown RBP13.54□□□□□ -0.24
BRPF3-201ENST00000339717 EIF2B5Q13144 721 aaKnown RBP13.54□□□□□ -0.24
BRPF3-201ENST00000339717 SLC39A14Q15043 492 aa13.54□□□□□ -0.24
BRPF3-201ENST00000339717 SULT6B1Q6IMI4 303 aa13.54□□□□□ -0.24
BRPF3-201ENST00000339717 IZUMO2Q6UXV1 221 aa13.54□□□□□ -0.24
BRPF3-201ENST00000339717 EPM2AIP1Q7L775 607 aaPredicted RBP13.54□□□□□ -0.24
BRPF3-201ENST00000339717 CATIPQ7Z7H3 387 aa13.54□□□□□ -0.24
BRPF3-201ENST00000339717 SCUBE1Q8IWY4 988 aa13.54□□□□□ -0.24
BRPF3-201ENST00000339717 COX4I2Q96KJ9 171 aa13.54□□□□□ -0.24
BRPF3-201ENST00000339717 MRPL44Q9H9J2 332 aaKnown RBP13.54□□□□□ -0.24
BRPF3-201ENST00000339717 METTL14Q9HCE5 456 aaKnown RBP13.54□□□□□ -0.24
BRPF3-201ENST00000339717 RIC8AQ9NPQ8 531 aa13.54□□□□□ -0.24
BRPF3-201ENST00000339717 BAG3O95817 575 aa13.53□□□□□ -0.24
BRPF3-201ENST00000339717 PTGS2P35354 604 aa13.53□□□□□ -0.24
BRPF3-201ENST00000339717 RTN1Q16799 776 aa13.53□□□□□ -0.24
BRPF3-201ENST00000339717 LRRC34Q8IZ02 419 aa13.53□□□□□ -0.24
BRPF3-201ENST00000339717 CCDC82Q8N4S0 544 aa13.53□□□□□ -0.24
BRPF3-201ENST00000339717 DGCR14Q96DF8 476 aaKnown RBP13.53□□□□□ -0.24
BRPF3-201ENST00000339717 IMPG2Q9BZV3 1241 aa13.53□□□□□ -0.24
BRPF3-201ENST00000339717 TBCCD1Q9NVR7 557 aa13.53□□□□□ -0.24
BRPF3-201ENST00000339717 STRIP2Q9ULQ0 834 aa13.53□□□□□ -0.24
BRPF3-201ENST00000339717 FADS3Q9Y5Q0 445 aa13.53□□□□□ -0.24
BRPF3-201ENST00000339717 NOTOA8MTQ0 251 aa13.53□□□□□ -0.24
BRPF3-201ENST00000339717 IFIT1P09914 478 aaKnown RBP13.53□□□□□ -0.24
BRPF3-201ENST00000339717 ZNF24P17028 368 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms